mRNA_P-wetherbeei_contig21457.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig21457.1.1 vs. uniprot
Match: A0A849UHH7_9PROT (PEP-CTERM sorting domain-containing protein n=1 Tax=Methylotenera sp. TaxID=2051956 RepID=A0A849UHH7_9PROT) HSP 1 Score: 52.8 bits (125), Expect = 7.680e-6 Identity = 49/135 (36.30%), Postives = 71/135 (52.59%), Query Frame = 1
Query: 25 FSGTNKFGTFSDTYSFTLGSSGGISDISSWTNVAGTNVTGFDVALTLTGGGAIANATQTVFTG--TQLQSKLEIP-SLVAGTYNITFSGVGGGSLGGRFLSTLTIVTPALAVPEPESWIMLLVGICLVGTIARRR 420
F G N G+F+DT++F+L + SD S N F I N + ++F TQL + L+ SLVAG Y + SGV G +GG + + VTP VPE +++ M+L+G+ L+G IARRR
Sbjct: 36 FFGNNVSGSFTDTFTFSLLDN---SDTSIGATTLNLNFRRFSFL-------NINNLSLSLFDSGDTQLSTGLDFSQSLVAGNYYLNVSGVATGYIGGLYAGGIN-VTP---VPEAKTYTMMLLGLGLIGFIARRR 156
BLAST of mRNA_P-wetherbeei_contig21457.1.1 vs. uniprot
Match: A0A7W9DFV7_9BURK (PEP-CTERM domain-containing protein n=3 Tax=unclassified Janthinobacterium TaxID=2610881 RepID=A0A7W9DFV7_9BURK) HSP 1 Score: 52.8 bits (125), Expect = 1.250e-5 Identity = 45/138 (32.61%), Postives = 69/138 (50.00%), Query Frame = 1
Query: 25 FSGTNKFGTFSDTYSFTLGSSGGISDISSWTNVAGTNVTGFDVALTLTGGGAIANATQTVFTGTQLQS------KLEIPSLVAGTYNITFSGVGGGSLGGRFLSTLTIVTPALAVPEPESWIMLLVGICLVGTIARRR 420
F N GTF D Y+F+ I ++SS + + + T + L G + ++ VF GT++QS L + L GTY ++ SG + + T+ + AVPEPE++ MLL G+ LVG +ARRR
Sbjct: 62 FGKNNLNGTFIDNYTFS------IDELSSLSGITTSISTKPSIDLLELTGFKLTDSFGNVFNGTRVQSGQIDEWNLLLDKLAIGTYTLSVSGTVLTNAAASYSGTINLS----AVPEPETYAMLLAGLGLVGFVARRR 189
BLAST of mRNA_P-wetherbeei_contig21457.1.1 vs. uniprot
Match: A0A2T4IK39_9RHOO (PEP-CTERM domain-containing protein n=1 Tax=Thauera lacus TaxID=2136175 RepID=A0A2T4IK39_9RHOO) HSP 1 Score: 52.4 bits (124), Expect = 1.310e-5 Identity = 42/139 (30.22%), Postives = 70/139 (50.36%), Query Frame = 1
Query: 16 VLAFSGTNKFGTFSDTYSFTLGSS----GGISDISSWTNVAGTNVTGFDVALTLTGGGAIANATQTVFTGTQLQSKLEIPSLVAGTYNITFSGVGGGSLGGRFLSTLTIVTPALAVPEPESWIMLLVGICLVGTIARRR 420
V+A + T G FSDT++F+L G + D+ S + N++ L + G + + + K + +LVA +Y++ SG G GGR+ +T A VPEP++ +M+L G+ L+G +ARRR
Sbjct: 35 VIASTVTTAKGAFSDTWNFSLAGDSFTVGAVFDLPSLLGLH-YNISSLSAQLFSSSGALVVDFDDCFLSSKDF--KFSLGTLVADSYSLLVSGNATGWAGGRYELKMTAKQIAAPVPEPQTLLMMLSGLGLLGAVARRR 170
BLAST of mRNA_P-wetherbeei_contig21457.1.1 vs. uniprot
Match: A0A7W2IBP6_9BURK (FxDxF family PEP-CTERM protein n=1 Tax=Duganella sp. LX20W TaxID=2758569 RepID=A0A7W2IBP6_9BURK) HSP 1 Score: 51.6 bits (122), Expect = 2.930e-5 Identity = 51/147 (34.69%), Postives = 73/147 (49.66%), Query Frame = 1
Query: 19 LAFSGTNKFGT----------FSDTYSFTLGSSGGISDISSWTNVA---GTNVTGFDVALTLTGGGAIANATQTVFTGTQLQSKLEIPSLVAGTYNITFSGVGGGSLGGRFLSTLTIVTPALAVPEPESWIMLLVGICLVGTIARRR 420
LA +GT FG F+D ++FT + + I + T+ + G N+TGF + GGA+A A V TG + L +L AG+Y + SG + GG F TI AVPEPE + ML VG+ L+G + +RR
Sbjct: 40 LAPNGTAHFGDKFKNNLKNDIFADHFTFTTTGTTKLDLILTSTSTSALNGLNITGFSL---YKAGGALAVAGTQVQTGATDKWTLGDANLAAGSYYVQVSGNVVSNTGGAFAGNGTIS----AVPEPEGYAMLFVGLGLIGLVKQRR 179
BLAST of mRNA_P-wetherbeei_contig21457.1.1 vs. uniprot
Match: UPI001BB7CBA2 (PEP-CTERM sorting domain-containing protein n=1 Tax=Rhodoferax sp. AJA081-3 TaxID=2752316 RepID=UPI001BB7CBA2) HSP 1 Score: 51.6 bits (122), Expect = 3.650e-5 Identity = 28/55 (50.91%), Postives = 36/55 (65.45%), Query Frame = 1
Query: 256 GTYNITFSGVGGGSLGGRFLSTLTIVTPALAVPEPESWIMLLVGICLVGTIARRR 420
G N+TFS GG G L +++ T AVPEPES+ M+L G+ L+GTIARRR
Sbjct: 150 GATNLTFSATGGSDSLGGSLDNVSVTT---AVPEPESYAMMLAGLALMGTIARRR 201
BLAST of mRNA_P-wetherbeei_contig21457.1.1 vs. uniprot
Match: A0A2S7JB06_9BURK (Pyruvate-binding protein n=1 Tax=Rhodoferax sp. TS-BS-61-7 TaxID=2094194 RepID=A0A2S7JB06_9BURK) HSP 1 Score: 50.8 bits (120), Expect = 4.750e-5 Identity = 44/134 (32.84%), Postives = 67/134 (50.00%), Query Frame = 1
Query: 34 TNKFGTFSDTYSFTLGSSGGISD-----ISSWTNVAGTNVTGFDVALTLTGGGAIANATQTVFTGTQLQSKLEIPSLVAGTYNITFSGVGGGSLGGRFLSTLTIVTPALAVPEPESWIMLLVGICLVGTIARRR 420
T+ G+F DT +F++ S+ +S + S+ N + N++ V + A F G +P+ AG Y++ +G+ G+ GG T I A VPEPE++ MLL G+ LVGTIARRR
Sbjct: 39 THAAGSFEDTINFSIASASTLSGTASNLVLSFGNFSVLNISNLMVNV-WNNSHAAGXXXYGSFAGNTQTYTFNLPA--AGNYHVDITGIANGASGG----TYGIALSAAPVPEPETFAMLLAGLGLVGTIARRR 165 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig21457.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig21457.1.1 >prot_P-wetherbeei_contig21457.1.1 ID=prot_P-wetherbeei_contig21457.1.1|Name=mRNA_P-wetherbeei_contig21457.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=140bp VVVGDVLAFSGTNKFGTFSDTYSFTLGSSGGISDISSWTNVAGTNVTGFDback to top mRNA from alignment at P-wetherbeei_contig21457:310..729+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig21457.1.1 ID=mRNA_P-wetherbeei_contig21457.1.1|Name=mRNA_P-wetherbeei_contig21457.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=420bp|location=Sequence derived from alignment at P-wetherbeei_contig21457:310..729+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig21457:310..729+ >mRNA_P-wetherbeei_contig21457.1.1 ID=mRNA_P-wetherbeei_contig21457.1.1|Name=mRNA_P-wetherbeei_contig21457.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=420bp|location=Sequence derived from alignment at P-wetherbeei_contig21457:310..729+ (Phaeothamnion wetherbeei SAG_119_79)back to top |