mRNA_P-wetherbeei_contig2119.6.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig2119.6.1 vs. uniprot
Match: A0A6S9H5Z4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9H5Z4_HETAK) HSP 1 Score: 89.0 bits (219), Expect = 1.250e-17 Identity = 56/143 (39.16%), Postives = 77/143 (53.85%), Query Frame = 1
Query: 73 DFVFSSFNDTTGLTFVGSAATSACVNKSSLAYGAVEGNADLLKEMPPVPPILSEKVASWSKQEVETSAPEDTPPEKASIAGFGNREGTVASPDARHRECPVRARLTPSAPSRAGALWYDVPVAVATGLPTCFVLHPTAHRRVC 501
DFV+ FN TTGL F G AA+S C ++ +YG G++D L +P E ++ ++ T+ P++ E I FG+R+ V +P CPVR RLTPS P+RAGA WY P+ V G T F + H RVC
Sbjct: 22 DFVYPDFNQTTGLVFNGDAASSGCTDEFERSYGDYHGDSDQLNGS--LPTQRWETISLTGERTQTTNDPDEDIEE---ITRFGHRDDFVPTPGG---PCPVRLRLTPSRPARAGAAWYRNPLPVHLGFSTLFTFQVSDHSRVC 156
BLAST of mRNA_P-wetherbeei_contig2119.6.1 vs. uniprot
Match: A0A5A8EG74_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EG74_CAFRO) HSP 1 Score: 87.8 bits (216), Expect = 2.960e-17 Identity = 57/145 (39.31%), Postives = 76/145 (52.41%), Query Frame = 1
Query: 73 DFVFSSFNDTTGLTFVGSAATSACVNKSSLAYGAVEGNADLLKEMPPVPP--ILSEKVASWSKQEVETSAPEDTPPEKASIAGFGNREGTVASPDARHRECPVRARLTPSAPSRAGALWYDVPVAVATGLPTCFVLHPTAHRRVC 501
DF + +F D TGL+FVGSAAT++C N + AY G AD + VPP + +E S + VET P T + ++A FG+R+ +P C VRARLTPS P + GA+W +A G T F T H R C
Sbjct: 28 DFAYPTFGDLTGLSFVGSAATTSCGNNTPFAYQERHGTADGISRGS-VPPSEVHTEYAGSRETRTVETDDPATTGAVRDALASFGHRDSYGTAPVG---SCDVRARLTPSQPFKRGAIWRQQEAGIARGFDTEFTWQVTEHSRQC 168
BLAST of mRNA_P-wetherbeei_contig2119.6.1 vs. uniprot
Match: A0A6H5L892_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L892_9PHAE) HSP 1 Score: 83.2 bits (204), Expect = 1.880e-16 Identity = 42/75 (56.00%), Postives = 48/75 (64.00%), Query Frame = 1
Query: 277 PEDTPPEKASIAGFGNREGTVASPDARHRECPVRARLTPSAPSRAGALWYDVPVAVATGLPTCFVLHPTAHRRVC 501
P D PP A+ AGFGNRE SPDAR C VR+RLTPS PS+AGA+WY +PV V G T F T H R+C
Sbjct: 3 PGDAPP--AAQAGFGNREAVQQSPDARGSRCRVRSRLTPSLPSKAGAMWYSLPVPVTRGFETLFTFQITDHSRMC 75
BLAST of mRNA_P-wetherbeei_contig2119.6.1 vs. uniprot
Match: D8LHX6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHX6_ECTSI) HSP 1 Score: 76.6 bits (187), Expect = 2.410e-13 Identity = 36/64 (56.25%), Postives = 41/64 (64.06%), Query Frame = 1
Query: 310 AGFGNREGTVASPDARHRECPVRARLTPSAPSRAGALWYDVPVAVATGLPTCFVLHPTAHRRVC 501
AGFGNRE SPDA C VR+RLTPS PS+AGA+WY +PV V G T F T H R+C
Sbjct: 20 AGFGNREAVQQSPDAGGSRCRVRSRLTPSLPSKAGAMWYSLPVPVTRGFETLFTFQITDHSRMC 83
BLAST of mRNA_P-wetherbeei_contig2119.6.1 vs. uniprot
Match: A0A7S1CPA8_9STRA (RING-type E3 ubiquitin transferase n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CPA8_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 5.270e-9 Identity = 54/152 (35.53%), Postives = 75/152 (49.34%), Query Frame = 1
Query: 67 QGDFVFSSFNDTTGLTFVGSAATSAC--VNKSSLAYGAVE--------------GNADLLKEMPPVPPILSEKVASWSKQEVETSAPEDTPPE--KASIAGFGNREGTVASPDARHRECPVRARLTPSAPSRAGALWYDVPVAVATGLPTCF 468
+ DF++ +FNDTTGL F G+A T++C V+ S Y E G++DL VPP + + + S Q +E SA T K A G+R+ V S D CPVR R+TP+ P R G++W V+V TG T F
Sbjct: 27 RADFIYDTFNDTTGLEFNGNAVTTSCEGVDDHSYQYQEREATPPAEGYRPNEPHGDSDLNDHGEEVPPQIGQNTETVSVQTLE-SADNFTISRIVKTQTAIVGHRDDFVDSQDP--VRCPVRLRMTPAQPFRKGSVWRKQRVSVYTGFETAF 175
BLAST of mRNA_P-wetherbeei_contig2119.6.1 vs. uniprot
Match: A0A7S2CPB0_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CPB0_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 3.360e-8 Identity = 34/96 (35.42%), Postives = 50/96 (52.08%), Query Frame = 1
Query: 214 VPPILSEKVASWSKQEVETSAPEDTPPEKASIAGFGNREGTVASPDARHRECPVRARLTPSAPSRAGALWYDVPVAVATGLPTCFVLHPTAHRRVC 501
+P +E + ++++ VET D+ S A FG+R+ P R CPVR RL PS PSRAG++WY P+ + G T F + H + C
Sbjct: 8 IPMQRAETIDKYTERTVETDDYGDSRDIPTSSAVFGHRDNFRPHPRGR---CPVRVRLNPSRPSRAGSMWYHTPIPINKGFQTLFTFQVSDHSKEC 100 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig2119.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig2119.6.1 >prot_P-wetherbeei_contig2119.6.1 ID=prot_P-wetherbeei_contig2119.6.1|Name=mRNA_P-wetherbeei_contig2119.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=167bp RRRLRLAAAAAASFALSRPSLVQGDFVFSSFNDTTGLTFVGSAATSACVNback to top mRNA from alignment at P-wetherbeei_contig2119:5651..6151+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig2119.6.1 ID=mRNA_P-wetherbeei_contig2119.6.1|Name=mRNA_P-wetherbeei_contig2119.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=501bp|location=Sequence derived from alignment at P-wetherbeei_contig2119:5651..6151+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig2119:5651..6151+ >mRNA_P-wetherbeei_contig2119.6.1 ID=mRNA_P-wetherbeei_contig2119.6.1|Name=mRNA_P-wetherbeei_contig2119.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=501bp|location=Sequence derived from alignment at P-wetherbeei_contig2119:5651..6151+ (Phaeothamnion wetherbeei SAG_119_79)back to top |