mRNA_P-wetherbeei_contig21047.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig21047.1.1 vs. uniprot
Match: A0A1A8Y1Y7_9RHOO (Uncharacterized protein n=1 Tax=Candidatus Propionivibrio aalborgensis TaxID=1860101 RepID=A0A1A8Y1Y7_9RHOO) HSP 1 Score: 79.7 bits (195), Expect = 1.150e-17 Identity = 40/70 (57.14%), Postives = 47/70 (67.14%), Query Frame = 1
Query: 1 MRRLVLVLVLLLLPLQASWAAVAAYCGHENGVASKHMGHHQHKHQAGAGDQASEPAPGTGGMDRDCGTCH 210
MRR + +L+L+ LP Q +WAAVA YC HE AS+H GHHQHKHQA A TGG+D DCGTCH
Sbjct: 1 MRRWLAILLLVFLPFQFTWAAVAGYCQHEADAASQHFGHHQHKHQADADHDGVPDTKLTGGIDSDCGTCH 70
BLAST of mRNA_P-wetherbeei_contig21047.1.1 vs. uniprot
Match: A0A7X3HPY8_9BURK (Cobalt-zinc-cadmium resistance protein n=1 Tax=Cupriavidus sp. SW-Y-13 TaxID=2653854 RepID=A0A7X3HPY8_9BURK) HSP 1 Score: 78.6 bits (192), Expect = 3.100e-17 Identity = 41/71 (57.75%), Postives = 47/71 (66.20%), Query Frame = 1
Query: 1 MRRLVLVLVLLLLPLQASWAAVAAYCGHENGVASKHMGHHQHKHQAGAGDQASEPAPGTGGMDRDCGTCHI 213
MRR L+ +LL+LP Q SWAA A YC HE+ VAS H+GHH H+HQA GD E A G D DCG CHI
Sbjct: 1 MRRFFLICLLLVLPFQFSWAAAARYCQHESAVASWHLGHHDHRHQAAQGDSEKEKA---GVADTDCGVCHI 68
BLAST of mRNA_P-wetherbeei_contig21047.1.1 vs. uniprot
Match: A0A1E4LLV2_9BURK (Uncharacterized protein n=1 Tax=Comamonadaceae bacterium SCN 68-20 TaxID=1660161 RepID=A0A1E4LLV2_9BURK) HSP 1 Score: 77.8 bits (190), Expect = 6.560e-17 Identity = 35/71 (49.30%), Postives = 52/71 (73.24%), Query Frame = 1
Query: 1 MRRLVLVLVLLLLPLQASWAAVAAYCGHENGVASKHMGHHQHKHQAGAGDQASEPAPGTGGMDRDCGTCHI 213
MRRLVL+ ++LLLP+Q +WAA AAYC HE+ A++H+GHH+H H+A A + + + + G +D DC CH+
Sbjct: 1 MRRLVLICMMLLLPIQWTWAAAAAYCAHESSAAARHIGHHEHVHKASAAEGSKKASIAAGALDLDCDYCHL 71
BLAST of mRNA_P-wetherbeei_contig21047.1.1 vs. uniprot
Match: N6Z6W7_THAL4 (Uncharacterized protein n=1 Tax=Thauera linaloolentis (strain DSM 12138 / CCUG 41526 / CIP 105981 / IAM 15112 / NBRC 102519 / 47Lol) TaxID=1123367 RepID=N6Z6W7_THAL4) HSP 1 Score: 75.9 bits (185), Expect = 3.570e-16 Identity = 35/64 (54.69%), Postives = 47/64 (73.44%), Query Frame = 1
Query: 19 VLVLLLLPLQASWAAVAAYCGHENGVASKHMGHHQHKHQAGAGDQASEPAPGTGGMDRDCGTCH 210
+L+LL+LPLQ+SWAAV+ YC HE+G A++H+GHH H HQ+GAGD + G +D DC CH
Sbjct: 7 ILLLLILPLQSSWAAVSVYCQHEDGAAAEHLGHHAHPHQSGAGDTSGTEGSG---VDSDCSFCH 67
BLAST of mRNA_P-wetherbeei_contig21047.1.1 vs. uniprot
Match: A0A5C7VLT4_9BURK (Uncharacterized protein n=1 Tax=Pelomonas sp. TaxID=1909303 RepID=A0A5C7VLT4_9BURK) HSP 1 Score: 75.5 bits (184), Expect = 7.180e-16 Identity = 43/84 (51.19%), Postives = 55/84 (65.48%), Query Frame = 1
Query: 1 MRRLVLVLVLLLLPLQASWAAVAAYCGHENGVASKHMGHHQHKH-----QAGAGDQASE----PAPGTG----GMDRDCGTCHI 213
MRR + +L+++LLPLQ SWA AAYCGHE G A++H+GHH H+H +AGA QA P TG G+D DCGTCH+
Sbjct: 1 MRRWLCLLLMVLLPLQFSWAVAAAYCGHEAGGAARHVGHHAHEHAASKAEAGASPQAEHAHQVPLKKTGSTPAGLDNDCGTCHL 84
BLAST of mRNA_P-wetherbeei_contig21047.1.1 vs. uniprot
Match: UPI001C2CE26E (hypothetical protein n=1 Tax=Pandoraea cepalis TaxID=2508294 RepID=UPI001C2CE26E) HSP 1 Score: 74.7 bits (182), Expect = 9.180e-16 Identity = 37/70 (52.86%), Postives = 48/70 (68.57%), Query Frame = 1
Query: 1 MRRLVLVLVLLLLPLQASWAAVAAYCGHENGVASKHMGHHQHKHQAGAGDQASEPAPGTGGMDRDCGTCH 210
MR+ + +++L+ LPLQ SWAAVA+YC HE G A+KH GHH H+H+A G AS T G D DC +CH
Sbjct: 1 MRKWLAIVLLVFLPLQFSWAAVASYCQHETGAAAKHFGHHAHQHKAADGQDASPDPAKTLGGDPDCASCH 70
BLAST of mRNA_P-wetherbeei_contig21047.1.1 vs. uniprot
Match: A0A368L1A8_9BURK (Uncharacterized protein n=1 Tax=Parvibium lacunae TaxID=1888893 RepID=A0A368L1A8_9BURK) HSP 1 Score: 74.7 bits (182), Expect = 1.070e-15 Identity = 35/71 (49.30%), Postives = 51/71 (71.83%), Query Frame = 1
Query: 1 MRRLVLVLVLLLLPLQASWAAVAAYCGHENGVASKHMGHHQHKHQAGAGDQASEPAPGTGGMDRDCGTCHI 213
M+R ++ +L+LLP+Q SWAA+A+YC HE+GVA+ H GHH H HQA ++ + A + G+ DCGTCH+
Sbjct: 1 MKRYSIIFLLILLPVQFSWAAMASYCQHESGVATNHPGHHSHAHQATDHHESGKDASPSTGVHHDCGTCHM 71
BLAST of mRNA_P-wetherbeei_contig21047.1.1 vs. uniprot
Match: UPI001AC32610 (DUF2946 family protein n=1 Tax=Rhodocyclales bacterium TaxID=2072421 RepID=UPI001AC32610) HSP 1 Score: 74.3 bits (181), Expect = 1.440e-15 Identity = 39/73 (53.42%), Postives = 50/73 (68.49%), Query Frame = 1
Query: 1 MRRLVLVLVLLLLPLQASWAAVAAYCGHENGVASKHMGHHQHKHQAG--AGDQASEPAPGTGGMDRDCGTCHI 213
M+RLVL+ ++L+LPLQ SWA V+AYC HE G A++H+GHH H+HQ AGD S P G DCG CH+
Sbjct: 1 MKRLVLMFLMLMLPLQFSWAGVSAYCQHETGAAAQHVGHHDHQHQKSPDAGDDGSAP----GKAHADCGYCHL 69
BLAST of mRNA_P-wetherbeei_contig21047.1.1 vs. uniprot
Match: A0A8G0UNH1_9BURK (Uncharacterized protein n=2 Tax=unclassified Diaphorobacter TaxID=2649760 RepID=A0A8G0UNH1_9BURK) HSP 1 Score: 74.3 bits (181), Expect = 1.630e-15 Identity = 42/73 (57.53%), Postives = 50/73 (68.49%), Query Frame = 1
Query: 1 MRRLVLVLVLLLLPLQASWAAVAAYCGHENGVASKHMGHHQHKHQAGA-GDQASEPAPGTG--GMDRDCGTCH 210
MRR + +L+L LLPLQ SWAAVAAYCGHE G +H+GHH+H+H A DQ S PA + G D DCG CH
Sbjct: 1 MRRWLAILMLALLPLQFSWAAVAAYCGHETGQHVQHLGHHEHQHTDEATADQGSAPADQSAPAGFDFDCGHCH 73
BLAST of mRNA_P-wetherbeei_contig21047.1.1 vs. uniprot
Match: A0A2T7UHM6_9BURK (Uncharacterized protein n=13 Tax=Proteobacteria TaxID=1224 RepID=A0A2T7UHM6_9BURK) HSP 1 Score: 73.9 bits (180), Expect = 2.150e-15 Identity = 35/71 (49.30%), Postives = 48/71 (67.61%), Query Frame = 1
Query: 1 MRRLVLVLVLLLLPLQASWAAVAAYCGHENGVASKHMGHHQHKHQAGAGDQASEPAPGTGGMDRDCGTCHI 213
M++ + + +L+LLPLQ SWAA+A+YC HE +KH GHH H H A +S+ AP + GMD DC TCH+
Sbjct: 1 MKKFLAIFLLVLLPLQYSWAAMASYCEHETSATAKHPGHHTHDHAAIDQQDSSKNAPQSAGMDHDCATCHM 71 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig21047.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig21047.1.1 >prot_P-wetherbeei_contig21047.1.1 ID=prot_P-wetherbeei_contig21047.1.1|Name=mRNA_P-wetherbeei_contig21047.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=71bp MRRLVLVLVLLLLPLQASWAAVAAYCGHENGVASKHMGHHQHKHQAGAGDback to top mRNA from alignment at P-wetherbeei_contig21047:301..513- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig21047.1.1 ID=mRNA_P-wetherbeei_contig21047.1.1|Name=mRNA_P-wetherbeei_contig21047.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=213bp|location=Sequence derived from alignment at P-wetherbeei_contig21047:301..513- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig21047:301..513- >mRNA_P-wetherbeei_contig21047.1.1 ID=mRNA_P-wetherbeei_contig21047.1.1|Name=mRNA_P-wetherbeei_contig21047.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=213bp|location=Sequence derived from alignment at P-wetherbeei_contig21047:301..513- (Phaeothamnion wetherbeei SAG_119_79)back to top |