mRNA_P-wetherbeei_contig20930.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig20930.1.1 vs. uniprot
Match: A0A7C2QTX9_9HYPH (TauD/TfdA family dioxygenase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C2QTX9_9HYPH) HSP 1 Score: 315 bits (808), Expect = 2.770e-106 Identity = 151/192 (78.65%), Postives = 172/192 (89.58%), Query Frame = 1
Query: 4 MAVSIRPLRDVFVGEVSGVDITKPLRPDEVAALEAGMDRYAVLVFHGQNISDEQQMAFSQNFGPLEDARGGNVTRPEDKRLGTGMNDVSNLGKDGKPLPRDSRQRLFNLGNSLWHSDSSFRAIPAKYSLLSARIVNAKGGNTEFADMRAAYDTLDDETKREIADLVCEHSLMYSRGALGFLDYTDEEKQMFK 579
M V+IR + +FVGEVSG+DIT+P+ +E A+EAGMDRYAVLVFH Q ++DEQQMAF++ FG +EDARGGNVTRPEDKRL GMNDVSNLGKDG+PL RDSRQRLFNLGN LWHSDSSFRAIPAKYSLLSAR+VN KGGNTEFADMRAAYD LDD+ KR+I DLVCEHSLMYSRG+LGF+DYT+EEK+MFK
Sbjct: 1 MPVAIRQIHPLFVGEVSGIDITRPISREEATAIEAGMDRYAVLVFHDQPVTDEQQMAFTKTFGAIEDARGGNVTRPEDKRLQVGMNDVSNLGKDGRPLARDSRQRLFNLGNMLWHSDSSFRAIPAKYSLLSARVVNPKGGNTEFADMRAAYDALDDDMKRQIEDLVCEHSLMYSRGSLGFVDYTEEEKRMFK 192
BLAST of mRNA_P-wetherbeei_contig20930.1.1 vs. uniprot
Match: A0A2V7CXI7_9BACT (2,4-dichlorophenoxyacetate dioxygenase n=3 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V7CXI7_9BACT) HSP 1 Score: 314 bits (804), Expect = 1.050e-105 Identity = 150/192 (78.12%), Postives = 171/192 (89.06%), Query Frame = 1
Query: 4 MAVSIRPLRDVFVGEVSGVDITKPLRPDEVAALEAGMDRYAVLVFHGQNISDEQQMAFSQNFGPLEDARGGNVTRPEDKRLGTGMNDVSNLGKDGKPLPRDSRQRLFNLGNSLWHSDSSFRAIPAKYSLLSARIVNAKGGNTEFADMRAAYDTLDDETKREIADLVCEHSLMYSRGALGFLDYTDEEKQMFK 579
M +SIR + VFVGEVSG+DI KP PDEVAA++AGMDRYAVLVFH Q I+DEQQMAFSQNFGPLEDARGGN+T+PEDKRL TGMNDVSNLG+DG+PL R+SR RLFNLGN LWHSDSSFRA+PA+YSLLSAR+VN GGNTEFADMRAAYDTLD TK +I DL+CEHSLMYSRG+LG LDY++EE+ MF+
Sbjct: 1 MTISIRQIHPVFVGEVSGIDIAKPRTPDEVAAIKAGMDRYAVLVFHDQKITDEQQMAFSQNFGPLEDARGGNITKPEDKRLQTGMNDVSNLGRDGQPLARESRVRLFNLGNMLWHSDSSFRAVPAQYSLLSARVVNPAGGNTEFADMRAAYDTLDAATKAQIEDLICEHSLMYSRGSLGMLDYSEEERAMFR 192
BLAST of mRNA_P-wetherbeei_contig20930.1.1 vs. uniprot
Match: A0A2V6YZJ4_9BACT (2,4-dichlorophenoxyacetate dioxygenase (Fragment) n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V6YZJ4_9BACT) HSP 1 Score: 308 bits (789), Expect = 6.770e-105 Identity = 148/192 (77.08%), Postives = 168/192 (87.50%), Query Frame = 1
Query: 4 MAVSIRPLRDVFVGEVSGVDITKPLRPDEVAALEAGMDRYAVLVFHGQNISDEQQMAFSQNFGPLEDARGGNVTRPEDKRLGTGMNDVSNLGKDGKPLPRDSRQRLFNLGNSLWHSDSSFRAIPAKYSLLSARIVNAKGGNTEFADMRAAYDTLDDETKREIADLVCEHSLMYSRGALGFLDYTDEEKQMFK 579
M ++IR + VFVGEVSGVD+ +PL PDEVAA+EAGMDRYAVLVF Q I+DEQQMAFS+NFG LEDARGGN+T+PEDKRL TGMNDVSNLG+DG+PLPRDSR RLFNLGN LWHSDSSFR IPAKYSLLSAR+VN GGNTEFADMRAAYD LD TK + DL+CEHSLMYSRG+LG LDY++EE+ MF+
Sbjct: 1 MTIAIRQIHPVFVGEVSGVDLARPLAPDEVAAIEAGMDRYAVLVFRDQKITDEQQMAFSRNFGALEDARGGNITKPEDKRLQTGMNDVSNLGRDGQPLPRDSRVRLFNLGNMLWHSDSSFRPIPAKYSLLSARVVNPTGGNTEFADMRAAYDALDASTKALVEDLICEHSLMYSRGSLGMLDYSEEERAMFR 192
BLAST of mRNA_P-wetherbeei_contig20930.1.1 vs. uniprot
Match: A0A2V6QKE4_9BACT (2,4-dichlorophenoxyacetate dioxygenase n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V6QKE4_9BACT) HSP 1 Score: 310 bits (795), Expect = 4.330e-104 Identity = 153/192 (79.69%), Postives = 166/192 (86.46%), Query Frame = 1
Query: 4 MAVSIRPLRDVFVGEVSGVDITKPLRPDEVAALEAGMDRYAVLVFHGQNISDEQQMAFSQNFGPLEDARGGNVTRPEDKRLGTGMNDVSNLGKDGKPLPRDSRQRLFNLGNSLWHSDSSFRAIPAKYSLLSARIVNAKGGNTEFADMRAAYDTLDDETKREIADLVCEHSLMYSRGALGFLDYTDEEKQMFK 579
M +IR + VFVGEVSGVD+T PL DEVAA+EAGMDRYAVLVFH Q I+DEQQMAFSQNFG LEDARGGN+T+PEDKRL GMNDVSNLGKDG+PLPRDSR+R FNLGN LWHSDSSFR IPAKYSLLSAR+VN GGNTEFADMRAAYD LD TK EI LVCEHSLMYSRG+LG LDY+DEE+ MFK
Sbjct: 1 MTTAIRQIHPVFVGEVSGVDLTLPLSRDEVAAIEAGMDRYAVLVFHDQKITDEQQMAFSQNFGKLEDARGGNITKPEDKRLQVGMNDVSNLGKDGRPLPRDSRERAFNLGNMLWHSDSSFRPIPAKYSLLSARVVNPVGGNTEFADMRAAYDALDAATKAEIEALVCEHSLMYSRGSLGMLDYSDEERAMFK 192
BLAST of mRNA_P-wetherbeei_contig20930.1.1 vs. uniprot
Match: A0A1B1U9J1_9BRAD (2,4-dichlorophenoxyacetate dioxygenase n=9 Tax=Bradyrhizobium TaxID=374 RepID=A0A1B1U9J1_9BRAD) HSP 1 Score: 307 bits (787), Expect = 4.460e-103 Identity = 147/192 (76.56%), Postives = 167/192 (86.98%), Query Frame = 1
Query: 4 MAVSIRPLRDVFVGEVSGVDITKPLRPDEVAALEAGMDRYAVLVFHGQNISDEQQMAFSQNFGPLEDARGGNVTRPEDKRLGTGMNDVSNLGKDGKPLPRDSRQRLFNLGNSLWHSDSSFRAIPAKYSLLSARIVNAKGGNTEFADMRAAYDTLDDETKREIADLVCEHSLMYSRGALGFLDYTDEEKQMFK 579
MA++IR L FVGEVSG+D+ KPL P E A +EAGMD+YAVL+F Q+I+DEQQ+AF+ NFG EDARGGN+ +P+D RL TG+NDVSNLGKDGKPLPRDSR LFNLGN LWHSDSSFR IPAK+SLLSAR+VN KGGNTEFADMRAAYD LDDETK EI DL+CEHSLMYSRG+LGFLDYTDEEK+MFK
Sbjct: 1 MAIAIRQLHPHFVGEVSGLDLRKPLTPQEAADVEAGMDKYAVLLFRNQDITDEQQLAFALNFGQREDARGGNIVKPQDSRLSTGLNDVSNLGKDGKPLPRDSRAHLFNLGNCLWHSDSSFRPIPAKFSLLSARVVNPKGGNTEFADMRAAYDALDDETKAEIEDLICEHSLMYSRGSLGFLDYTDEEKEMFK 192
BLAST of mRNA_P-wetherbeei_contig20930.1.1 vs. uniprot
Match: A0A2V7BVR3_9BACT (2,4-dichlorophenoxyacetate dioxygenase n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V7BVR3_9BACT) HSP 1 Score: 305 bits (781), Expect = 3.640e-102 Identity = 150/192 (78.12%), Postives = 167/192 (86.98%), Query Frame = 1
Query: 4 MAVSIRPLRDVFVGEVSGVDITKPLRPDEVAALEAGMDRYAVLVFHGQNISDEQQMAFSQNFGPLEDARGGNVTRPEDKRLGTGMNDVSNLGKDGKPLPRDSRQRLFNLGNSLWHSDSSFRAIPAKYSLLSARIVNAKGGNTEFADMRAAYDTLDDETKREIADLVCEHSLMYSRGALGFLDYTDEEKQMFK 579
M +SIR + VFVGEVSGVDI KPL DEVA +EAGMDRYAVLVF Q I+DEQQMAFS+NFG LEDARGGN+T+PEDKRL TGMNDVSNLG+DG+PLPRDSR RLFNLGN LWHSDSSFR +PAKYSLLSAR+VN GGNTEFADMRAAYD+LD TK I +LVCEHSLMYSRG+LG LDY+DEE+ MF+
Sbjct: 1 MTLSIRQIHPVFVGEVSGVDIGKPLSGDEVATIEAGMDRYAVLVFRDQRITDEQQMAFSRNFGALEDARGGNITKPEDKRLQTGMNDVSNLGRDGQPLPRDSRARLFNLGNMLWHSDSSFRPVPAKYSLLSARVVNPTGGNTEFADMRAAYDSLDAATKALIENLVCEHSLMYSRGSLGMLDYSDEERAMFR 192
BLAST of mRNA_P-wetherbeei_contig20930.1.1 vs. uniprot
Match: A0A3N5N365_9HYPH (TauD/TfdA family dioxygenase n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A3N5N365_9HYPH) HSP 1 Score: 305 bits (780), Expect = 5.160e-102 Identity = 149/192 (77.60%), Postives = 169/192 (88.02%), Query Frame = 1
Query: 4 MAVSIRPLRDVFVGEVSGVDITKPLRPDEVAALEAGMDRYAVLVFHGQNISDEQQMAFSQNFGPLEDARGGNVTRPEDKRLGTGMNDVSNLGKDGKPLPRDSRQRLFNLGNSLWHSDSSFRAIPAKYSLLSARIVNAKGGNTEFADMRAAYDTLDDETKREIADLVCEHSLMYSRGALGFLDYTDEEKQMFK 579
M V+IR + VFVGEVSGVDIT+ + P+ VAA+EAGMD+YAVLVF Q +SDEQQM F++NFG +E+ARGGNVT+ EDKRL GMNDVSNLGKDG+PL RDSRQRLFNLGN LWHSDSSFRAIPAKYSLLSAR+VN KGG+TEFADMRAAYD LD +TK EI LVCEHSLMYSRG+LGF+DYTDEEKQ+FK
Sbjct: 1 MPVAIRQIHPVFVGEVSGVDITQAVSPEAVAAIEAGMDKYAVLVFRDQAVSDEQQMEFTRNFGSIENARGGNVTKDEDKRLANGMNDVSNLGKDGRPLGRDSRQRLFNLGNMLWHSDSSFRAIPAKYSLLSARVVNPKGGDTEFADMRAAYDELDQDTKAEIEPLVCEHSLMYSRGSLGFVDYTDEEKQLFK 192
BLAST of mRNA_P-wetherbeei_contig20930.1.1 vs. uniprot
Match: A0A2V6QK26_9BACT (2,4-dichlorophenoxyacetate dioxygenase n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V6QK26_9BACT) HSP 1 Score: 305 bits (780), Expect = 5.710e-102 Identity = 149/192 (77.60%), Postives = 168/192 (87.50%), Query Frame = 1
Query: 4 MAVSIRPLRDVFVGEVSGVDITKPLRPDEVAALEAGMDRYAVLVFHGQNISDEQQMAFSQNFGPLEDARGGNVTRPEDKRLGTGMNDVSNLGKDGKPLPRDSRQRLFNLGNSLWHSDSSFRAIPAKYSLLSARIVNAKGGNTEFADMRAAYDTLDDETKREIADLVCEHSLMYSRGALGFLDYTDEEKQMFK 579
M VSIR + VFVGEVSG+DI++ L DE+AA+EAGMDRYAVLVFH Q ++DEQQMAFS+NFGPLEDARGGN+TRPEDKRL GMNDVSNLGKDG+PL R+SR RLFNLGN LWHSDSSFR IPAKYSLLSAR+VN GGNTEFADMRAAYD LD +TK I DLVCEHSLMYSRG+LG LDY++EE+ MF+
Sbjct: 1 MNVSIRQIHPVFVGEVSGIDISRRLSRDEIAAVEAGMDRYAVLVFHDQKLTDEQQMAFSRNFGPLEDARGGNITRPEDKRLQVGMNDVSNLGKDGRPLDRESRVRLFNLGNMLWHSDSSFRPIPAKYSLLSARVVNPVGGNTEFADMRAAYDALDADTKALIEDLVCEHSLMYSRGSLGMLDYSEEERAMFR 192
BLAST of mRNA_P-wetherbeei_contig20930.1.1 vs. uniprot
Match: A0A2V7CBI2_9BACT (2,4-dichlorophenoxyacetate dioxygenase n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V7CBI2_9BACT) HSP 1 Score: 303 bits (777), Expect = 1.480e-101 Identity = 149/192 (77.60%), Postives = 168/192 (87.50%), Query Frame = 1
Query: 4 MAVSIRPLRDVFVGEVSGVDITKPLRPDEVAALEAGMDRYAVLVFHGQNISDEQQMAFSQNFGPLEDARGGNVTRPEDKRLGTGMNDVSNLGKDGKPLPRDSRQRLFNLGNSLWHSDSSFRAIPAKYSLLSARIVNAKGGNTEFADMRAAYDTLDDETKREIADLVCEHSLMYSRGALGFLDYTDEEKQMFK 579
M +SIR + VFVGEVSGVDIT+PL PDEVAA+EAGMDR AVLVF Q I+DEQQMAFS+NFG LEDARGGN+T+PEDKRL GMNDVSNLG+D +PL RDSR RLFNLGN LWHSDSSFRA+PAKYSLLSAR+VN GGNTEFADMRAAYD+LD TK +I DLVCEHSLMYSRG+LG LDY++EE+ MF+
Sbjct: 1 MNMSIRQIHPVFVGEVSGVDITRPLSPDEVAAIEAGMDRDAVLVFRDQRITDEQQMAFSRNFGALEDARGGNITKPEDKRLQVGMNDVSNLGRDSRPLDRDSRVRLFNLGNMLWHSDSSFRAVPAKYSLLSARVVNPVGGNTEFADMRAAYDSLDAPTKAQIEDLVCEHSLMYSRGSLGMLDYSEEERAMFR 192
BLAST of mRNA_P-wetherbeei_contig20930.1.1 vs. uniprot
Match: A0A1Q7PDF2_9BACT (2,4-dichlorophenoxyacetate dioxygenase n=2 Tax=unclassified Candidatus Rokubacteria TaxID=2760815 RepID=A0A1Q7PDF2_9BACT) HSP 1 Score: 301 bits (770), Expect = 1.650e-100 Identity = 148/192 (77.08%), Postives = 167/192 (86.98%), Query Frame = 1
Query: 4 MAVSIRPLRDVFVGEVSGVDITKPLRPDEVAALEAGMDRYAVLVFHGQNISDEQQMAFSQNFGPLEDARGGNVTRPEDKRLGTGMNDVSNLGKDGKPLPRDSRQRLFNLGNSLWHSDSSFRAIPAKYSLLSARIVNAKGGNTEFADMRAAYDTLDDETKREIADLVCEHSLMYSRGALGFLDYTDEEKQMFK 579
M++SIR + VFVGEVSGVDIT+PL P+EVAA+EAGMDRYAVLVFH Q ++D+QQMAFS+NFG LEDARGGN+TRPEDKRL GMNDVSNLG+DG+PL RDSR RLFNLGN LWHSDSSFRA PAKYSLLSAR VN GGNTEFADMRAAYD L K +I DLVCEHSLMYSRG+LG LDY++EE+ MF+
Sbjct: 1 MSLSIRQIHPVFVGEVSGVDITRPLSPEEVAAVEAGMDRYAVLVFHDQKLTDDQQMAFSRNFGALEDARGGNITRPEDKRLQVGMNDVSNLGRDGRPLDRDSRVRLFNLGNMLWHSDSSFRATPAKYSLLSARGVNPTGGNTEFADMRAAYDALAAGLKGQIEDLVCEHSLMYSRGSLGMLDYSEEERAMFR 192 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20930.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig20930.1.1 >prot_P-wetherbeei_contig20930.1.1 ID=prot_P-wetherbeei_contig20930.1.1|Name=mRNA_P-wetherbeei_contig20930.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=192bp MAVSIRPLRDVFVGEVSGVDITKPLRPDEVAALEAGMDRYAVLVFHGQNIback to top mRNA from alignment at P-wetherbeei_contig20930:90..668- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig20930.1.1 ID=mRNA_P-wetherbeei_contig20930.1.1|Name=mRNA_P-wetherbeei_contig20930.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=579bp|location=Sequence derived from alignment at P-wetherbeei_contig20930:90..668- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig20930:90..668- >mRNA_P-wetherbeei_contig20930.1.1 ID=mRNA_P-wetherbeei_contig20930.1.1|Name=mRNA_P-wetherbeei_contig20930.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=576bp|location=Sequence derived from alignment at P-wetherbeei_contig20930:90..668- (Phaeothamnion wetherbeei SAG_119_79)back to top |