mRNA_P-wetherbeei_contig20901.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig20901.1.1
Unique NamemRNA_P-wetherbeei_contig20901.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig20901.1.1 vs. uniprot
Match: A0A521E8L3_9RHOB (Transcriptional regulator, AraC family n=1 Tax=Ruegeria faecimaris TaxID=686389 RepID=A0A521E8L3_9RHOB)

HSP 1 Score: 375 bits (963), Expect = 9.340e-127
Identity = 197/324 (60.80%), Postives = 244/324 (75.31%), Query Frame = 1
Query:    1 IPMIISLLLFAFLAHRMLTRETHVTLLALIAACAVQGAIVALVQYYGFTSIRPLQPLWATLIPPIAWLAFSQAARGDTKPGDVPLHSAGFVLALLFLLLQPQLLDVWIPLLFAGYGITMMLQLVRGEDSLPHSRLESGTMPLLAWRIIAISLIASAASDVFIAYNLAAGENGVLLWVPSVFSSLILLSLGAVSLSYAIESHHDDGGEDSGLSSEDAERDQSIVTKLDEYVQTRKPFLDPDLTLSRLSRRMLIPAKQLSAAINRVKGENVSRYINRHRIDHACGMMSGGNSVTDAMLSSGFNTKSNFNREFLRVKGENPRKWLES 972
            IPMI +LLL  FL HR LTR+TH TLL LI  CA Q A++ALVQYYGFT +R +QP+ AT+I   AWL+F QA+ G  +  D+ LH+ G  LA+ FL  QP+ LDV IP LFA YGI +   L+RGED LPHSRLE+G M +  WR++AI+LIASA SD+FIA  LA+G+  VLLW+PS+FS++ LL LGA+SLS+AIES           S +D  RD +IV KLD Y++T KP+LDPDLTL+RL+R++ +P KQLS+AIN+ K ENVSRYINRHRI HAC +M  G SVT+AML+SGFNTKSNFNREFLRV G NPR+WL S
Sbjct:    6 IPMITALLLSGFLLHRFLTRKTHPTLLVLIGCCAAQSAVIALVQYYGFTGLRVVQPILATVIAASAWLSFRQASVGYLRRQDLYLHAVGPALAISFLATQPEALDVLIPFLFAAYGIAIAFMLLRGEDCLPHSRLENGRMIVWVWRVLAIALIASAGSDIFIAVRLASGDTEVLLWLPSLFSAITLLILGALSLSHAIESQSIGSDTRDAYSKQDKTRDTAIVEKLDAYMETHKPYLDPDLTLARLARKLQVPEKQLSSAINKGKSENVSRYINRHRISHACAVMKTGKSVTEAMLASGFNTKSNFNREFLRVIGVNPRRWLRS 329          
BLAST of mRNA_P-wetherbeei_contig20901.1.1 vs. uniprot
Match: A0A1I6PXG4_9RHOB (AraC-type DNA-binding protein n=1 Tax=Sulfitobacter marinus TaxID=394264 RepID=A0A1I6PXG4_9RHOB)

HSP 1 Score: 370 bits (950), Expect = 7.140e-125
Identity = 191/325 (58.77%), Postives = 252/325 (77.54%), Query Frame = 1
Query:    1 IPMIISLLLFAFLAHRMLTRETHVTLLALIAACAVQGAIVALVQYYGFTSIRPLQPLWATLIPPIAWLAFSQAARGDTKPGDVPLHSA-GFVLALLFLLLQPQLLDVWIPLLFAGYGITMMLQLVRGEDSLPHSRLESGTMPLLAWRIIAISLIASAASDVFIAYNLAAGENGVLLWVPSVFSSLILLSLGAVSLSYAIESHHDDGGEDSGLSSEDAERDQSIVTKLDEYVQTRKPFLDPDLTLSRLSRRMLIPAKQLSAAINRVKGENVSRYINRHRIDHACGMMSGGNSVTDAMLSSGFNTKSNFNREFLRVKGENPRKWLES 972
            +PMI+SLLL  F+ HRMLTR+TH+TLL LI  CAVQ AI+ALVQYYG  S+R +Q L AT+IP IAWLAF QA+ G  +  ++ +H   G VLA++ +++ P  LDV IP LFAGYG+ +++ L +GEDSLPHSRLE+G + +L WR++A++LI SAA+D+FIA  ++ G + +LLW+PS+ SS+ LL LGA+ LS+AIES      E S  + +D +RD +IV KL+ Y++T KP+LDPDL+LSRLSR++L+P KQLS+AIN+ KGENVSRYIN HR+ HAC M+  G SVTDAM +SGFNTKSNFNREFLRV G NPR W++S
Sbjct:    6 VPMIVSLLLLGFVLHRMLTRKTHITLLVLITVCAVQSAIIALVQYYGVPSLRIVQALLATIIPAIAWLAFRQASAGHLRNQNIYIHLVIGPVLAVIGMIVNPDWLDVVIPSLFAGYGLAILIVLRQGEDSLPHSRLENGYLIVLVWRVLALALIGSAATDIFIAVRISLGHSDMLLWLPSLLSSITLLILGAIGLSHAIESQDAPQAERSPDTEQDRKRDSAIVEKLETYIETNKPYLDPDLSLSRLSRKLLVPEKQLSSAINKYKGENVSRYINAHRVQHACLMIQDGASVTDAMFASGFNTKSNFNREFLRVMGTNPRLWMKS 330          
BLAST of mRNA_P-wetherbeei_contig20901.1.1 vs. uniprot
Match: A0A238Y4M1_9RHOB (Transcriptional regulator, AraC family n=1 Tax=Puniceibacterium sediminis TaxID=1608407 RepID=A0A238Y4M1_9RHOB)

HSP 1 Score: 364 bits (935), Expect = 1.300e-122
Identity = 192/324 (59.26%), Postives = 244/324 (75.31%), Query Frame = 1
Query:    1 IPMIISLLLFAFLAHRMLTRETHVTLLALIAACAVQGAIVALVQYYGFTSIRPLQPLWATLIPPIAWLAFSQAARGDTKPGDVPLHSAGFVLALLFLLLQPQLLDVWIPLLFAGYGITMMLQLVRGEDSLPHSRLESGTMPLLAWRIIAISLIASAASDVFIAYNLAAGENGVLLWVPSVFSSLILLSLGAVSLSYAIESHHDDGGEDSGLSSEDAERDQSIVTKLDEYVQTRKPFLDPDLTLSRLSRRMLIPAKQLSAAINRVKGENVSRYINRHRIDHACGMMSGGNSVTDAMLSSGFNTKSNFNREFLRVKGENPRKWLES 972
            IPMII+LLL  FL HR LTRETH  LL LI  CA Q A++ALVQYYG T +R +QPL AT+IP ++WLAF QA+ G     D  LH  G V A++ L + P+ LDV IP LFAGYGI + + L+RGEDSLPHSRLE+G M +L WR++A++L+ASA +D+FIA  LA+G   VLLW+PS+FSS+ LL LGA+ LS+AI+S        +  S +D  RD +IV KL  Y++  KP+LDPDLTL+RL+R++ +P KQ+S+AIN+ +GENVSRYINRHRI HAC +M  G SVT+AML+SGFNTKSNFNREFLRV G +PR WL+S
Sbjct:    6 IPMIIALLLSGFLLHRALTRETHPALLVLIGCCAAQSAVIALVQYYGLTGLRIVQPLLATVIPAVSWLAFRQASVGYLGRHD-HLHLLGPVAAVVCLAISPEALDVLIPALFAGYGIAIAVALLRGEDSLPHSRLENGRMTVLVWRVLAVALVASAGTDIFIAIRLASGHANVLLWLPSLFSSVTLLVLGALGLSHAIDSQSTSPDARTEYSVQDKNRDTAIVEKLATYLEAHKPYLDPDLTLARLARKLQVPEKQVSSAINKAQGENVSRYINRHRIHHACALMQDGKSVTEAMLASGFNTKSNFNREFLRVMGASPRLWLKS 328          
BLAST of mRNA_P-wetherbeei_contig20901.1.1 vs. uniprot
Match: A0A847ZVP2_9HYPH (Helix-turn-helix transcriptional regulator n=1 Tax=Phyllobacteriaceae bacterium TaxID=1871068 RepID=A0A847ZVP2_9HYPH)

HSP 1 Score: 365 bits (937), Expect = 1.320e-122
Identity = 192/326 (58.90%), Postives = 248/326 (76.07%), Query Frame = 1
Query:    1 IPMIISLLLFAFLAHRMLTRETHVTLLALIAACAVQGAIVALVQYYGFTSIRPLQPLWATLIPPIAWLAFSQAARGDTKPGD----VPLHSAGFVLALLFLLLQPQLLDVWIPLLFAGYGITMMLQLVRGEDSLPHSRLESGTMPLLAWRIIAISLIASAASDVFIAYNLAAGENGVLLWVPSVFSSLILLSLGAVSLSYAIESHHDDGGEDSGLSSEDAERDQSIVTKLDEYVQTRKPFLDPDLTLSRLSRRMLIPAKQLSAAINRVKGENVSRYINRHRIDHACGMMSGGNSVTDAMLSSGFNTKSNFNREFLRVKGENPRKWL 966
            +P+II+LLL  FL  R+   ETH++LLALIA CAVQ AI+ALVQYYG   +RP+QPL AT+IPPIAW AF +A+ G          + LH+ G +L L  L++ P  LD  IPL F  YG+ M+ +L  GEDSLPHS L+ G   L+AWRI+A++LIASA  DV IAY LA G++GVL W+PSV SSL LLSLGA+SL+ A+E+  +  G+D+  ++E+ ERDQ+IV +LDEYV+++KP+LDPDLTL+RLSR++++PAKQLS+AINRVKGENVSRY+NR RI+HAC ++  G SVT AML SGFNTKSNFNREFLR +   PR W+
Sbjct:    6 VPLIIALLLLGFLVLRIARDETHISLLALIAVCAVQAAIIALVQYYGVAPLRPVQPLLATVIPPIAWFAFERASGGQASARASAWAMALHAIGPILGLFCLIVNPMFLDALIPLSFTCYGVAMLTRLWAGEDSLPHSLLDGGGASLMAWRIVALALIASAGCDVLIAYGLAHGQSGVLGWIPSVVSSLSLLSLGALSLTNAVEARREALGDDATPNAEELERDQAIVARLDEYVKSQKPYLDPDLTLARLSRKLIVPAKQLSSAINRVKGENVSRYVNRKRIEHACTLLERGASVTTAMLDSGFNTKSNFNREFLRTRKLAPRDWV 331          
BLAST of mRNA_P-wetherbeei_contig20901.1.1 vs. uniprot
Match: UPI001C5DB039 (AraC family transcriptional regulator n=1 Tax=Sulfitobacter sp. CW3 TaxID=2861965 RepID=UPI001C5DB039)

HSP 1 Score: 363 bits (931), Expect = 5.830e-122
Identity = 192/326 (58.90%), Postives = 249/326 (76.38%), Query Frame = 1
Query:    1 IPMIISLLLFAFLAHRMLTRETHVTLLALIAACAVQGAIVALVQYYGFTSIRPLQPLWATLIPPIAWLAFSQAARGDTKPGDVPLH-SAGFVLALLFLLLQPQLLDVWIPLLFAGYGITMMLQLVRGEDSLPHSRLESGTMPLLAWRIIAISLIASAASDVFIAYNLAAGENGVLLWVPSVFSSLILLSLGAVSLSYAIESHHDDGGEDSGLSSEDAERDQSIVTKLDEYVQTRKPFLDPDLTLSRLSRRMLIPAKQLSAAINRVKGENVSRYINRHRIDHACGMMSGGNSVTDAMLSSGFNTKSNFNREFLRVKGENPRKWLESQ 975
            +PMIISL+L   + HR LT +THVTLLALIA CA+Q AI+ALVQYYG +S+R +Q L A++IP IAWLAF QA+ G  +     +H   G  LA+  L++ P  LDV IP LFAGYG  +++ L +GEDSLPHSRLE+G + +L WRI+A++LI SAA+D+FIA  LA+G + +LLW+PS+ SS+ LL LGA+ LS+AIES +D   E S  + +D +RD +I+ KL+ Y+   KP+LDPDL+LSRL+R++LIP KQLS+AIN+ KGENVSRYIN HR+ HAC MM  G SVT+AM +SGFNTKSNFNREFLRV G NPR WL+S+
Sbjct:    6 VPMIISLVLLGLVLHRFLTGKTHVTLLALIAVCALQSAIIALVQYYGISSLRIVQGLVASIIPAIAWLAFRQASAGHLRNQKPYVHLMIGPALAVACLIINPNWLDVVIPSLFAGYGFAILIILRQGEDSLPHSRLENGYLIVLVWRILALALIGSAATDIFIALRLASGHSDMLLWLPSLLSSITLLVLGALGLSHAIESQNDPRSERSPDTDQDKDRDTAIIEKLETYIAMHKPYLDPDLSLSRLARKLLIPEKQLSSAINKYKGENVSRYINAHRVQHACAMMQDGTSVTEAMFASGFNTKSNFNREFLRVVGANPRLWLKSR 331          
BLAST of mRNA_P-wetherbeei_contig20901.1.1 vs. uniprot
Match: A0A4V2V4S4_9HYPH (AraC family transcriptional regulator n=1 Tax=Martelella mediterranea TaxID=293089 RepID=A0A4V2V4S4_9HYPH)

HSP 1 Score: 260 bits (665), Expect = 8.540e-82
Identity = 153/327 (46.79%), Postives = 209/327 (63.91%), Query Frame = 1
Query:    1 IPMIISLLLFAFLAHRMLTRETHVTLLAL-IAACAVQGAIVALVQYYGFTSIRPLQPLWATLIPPIAWLAFSQAARGDTKPGDVPLHSAGFVLALLFLLLQPQLLDVWIPLLFAGYGITMMLQLVRGEDSLPHSRLESGTMPLLAWRIIAISLIASAASDVFIAYNLAAGENGVLLWVPSVFSSLILLSLGAVSLSYAIESHHDDGGEDSGLSSEDAERDQSIVTKLDEYVQTRKPFLDPDLTLSRLSRRMLIPAKQLSAAINRVKGENVSRYINRHRIDHACGMMSGGNSVTDAMLSSGFNTKSNFNREFLRVKGENPRKWLESQS 978
            +P++ +L+L  F+  RML  E      A+ ++ACA+QG +VALV YYG T +RP+QP+ ATL+P +AWLAF  +           +H A     L  ++  P  +D  IPL+F GYG+ ++L L    D+LP +RLE+G  P   W  IA SL+ SA SD  IAY +AAG   +   + S+F+S+ LL+ G +SLS       D          E +E D +IV +LD  ++   P+LDPDLTLSRL+RR+ +PAK LS+AINR  GENVSR+INR RIDHAC  +  G++VT AMLSSGFNTKSNFNREF+RV G++P  WL+ Q+
Sbjct:    6 VPLVTALVL-GFMVLRMLAGERRPFETAVFLSACALQGLLVALVLYYGLTWLRPVQPVTATLVPALAWLAFRSSFIAPLNLKRDFIHLAAPAFTLFCVIFAPVTVDAVIPLIFLGYGLWILLALKARGDALPLARLEAGRQPQWLWAGIATSLLLSAVSDTLIAYVIAAGAPSLKPLIVSIFTSVALLAAGLLSLSPNAFGEGDPKEVARPEPPEASEADTAIVARLDALMRAETPYLDPDLTLSRLARRLKLPAKTLSSAINRATGENVSRHINRFRIDHACARLKAGDNVTAAMLSSGFNTKSNFNREFIRVTGKSPTAWLDGQA 331          
BLAST of mRNA_P-wetherbeei_contig20901.1.1 vs. uniprot
Match: A0A510X5H7_9GAMM (AraC family transcriptional regulator n=1 Tax=Halomonas pacifica TaxID=77098 RepID=A0A510X5H7_9GAMM)

HSP 1 Score: 259 bits (663), Expect = 2.000e-81
Identity = 154/333 (46.25%), Postives = 213/333 (63.96%), Query Frame = 1
Query:    1 IPMIISLLLFAFLAHRMLTRETHV-TLLALIAACAVQGAIVALVQYYGFTSIRPLQPLWATLIPPIAWLAFSQAARGDTKPGDVPLHSAGFVLALLFLLLQPQLLDVWIPLLFAGYGITMMLQLVRGEDSLPHSRLESGTMPLLAWRIIAISLIASAASDVFIAYNLAAGENGVLLWVPSVFSSLILLSLGAVSLSYAIESHHDDG---GEDSGLSSEDAERDQSIVTKLDEYVQTRKPFLDPDLTLSRLSRRMLIPAKQLSAAINRVKGENVSRYINRHRIDHACGMMSGGNSVTDAMLSSGFNTKSNFNREFLRVKGENPRKWLESQSWQP 987
            IPMI+++LL A+LA   L R       + LI ACAVQG +++L Q+YG T    +QP+ ATLIPP+AW+ F   A     P     H          +   PQ+LD+ IP  F  YG+ +++ L +G  +LP  RLESG  P L WR+IA++LIASA SD+ I  +   G+  +  W+  VFSSLILL LGA+ LS ++ES  ++     E   +   D E++++++ +LD  V ++  FLDP LTL+RLSR++ +PAK LS+ IN+  GENVSRYIN +RI+HAC  +  G SVT AML+SGFNTKSNFNREF RVKG  PR+WL +++  P
Sbjct:    6 IPMIVAILL-AYLAILTLARRDRPWPFVLLILACAVQGTVISLNQHYGVTLFHTVQPVTATLIPPLAWIIFQVTAIRAFAPSRHLPHLLLPAFVAFCMAFAPQVLDIVIPSGFVAYGVALLIALKQGPGNLPLPRLESGERPGLIWRVIALALIASAFSDILILLDQVLGQGRLQAWIIGVFSSLILLVLGALCLSRSLESEPNEACPAAEPPPVM--DLEQNRALIERLDHLVTSQTLFLDPGLTLNRLSRKLGVPAKLLSSTINQTTGENVSRYINAYRIEHACLQLEAGESVTSAMLNSGFNTKSNFNREFRRVKGHAPREWLATRAAVP 335          
BLAST of mRNA_P-wetherbeei_contig20901.1.1 vs. uniprot
Match: A0A1H4KAK0_9HYPH (Transcriptional regulator, AraC family n=7 Tax=Nitratireductor TaxID=245876 RepID=A0A1H4KAK0_9HYPH)

HSP 1 Score: 258 bits (659), Expect = 1.390e-80
Identity = 152/322 (47.20%), Postives = 209/322 (64.91%), Query Frame = 1
Query:    1 IPMIISLLLFAFLAHRMLTRETHVTLLALIAACAVQGAIVALVQYYGFTSIRPLQPLWATLIPPIAWLAFSQAA-RGDTKPGDVPLHSAGFVLALLFLLLQPQLLDVWIPLLFAGYGITMMLQLVRGEDSLPHSRLESGTMPLLAWRIIAISLIASAASDVFIAYNLAAGENGVLLWVPSVFSSLILLSLGAVSLSYAIESHHDDGGEDSGLSSEDAERDQSIVTKLDEYVQTRKPFLDPDLTLSRLSRRMLIPAKQLSAAINRVKGENVSRYINRHRIDHACGMMSGGNSVTDAMLSSGFNTKSNFNREFLRVKGENPRKW 963
            IPMII+L+L AFL    ++ E    L+AL+AACA+Q  IV+L Q+YG  ++ PLQP+ AT +PP+ WLAF  A+ R  + P D+ +H A    A   ++  P  LD  +P +F  YG+ ++++L R  D LP +RLE+G +P   W  I ++LI SA SD  IA  +  G+ G+   + SVFSS  LL++G +S+S       +   E    +   +E D  +V +LD  +QT   +LDP LTL+RL+RR+ +PAKQLS+AIN V GENVSRYINRHRI HAC  +  G +VT+AMLSSGFNTKSNFNREF R+ G  PR+W
Sbjct:   28 IPMIIALVLGAFLIRIAISGERPPFLMALLAACALQSLIVSLRQHYGIGALLPLQPITATFVPPLTWLAFQTASFRPFSLPRDL-VHLAAPAFAAFCVVFAPGTLDTVVPAIFVLYGLAILVKLHRSGDDLPLARLEAGRLPARIWGGIGLALILSALSDALIALAIMTGQTGLPPVIVSVFSSAALLAIGLLSISPNAMGETE--AESPPQNPHPSEEDAHLVQRLDALLQTDTLYLDPALTLARLARRLHVPAKQLSSAINLVNGENVSRYINRHRIHHACRALEDGANVTEAMLSSGFNTKSNFNREFRRITGTTPREW 346          
BLAST of mRNA_P-wetherbeei_contig20901.1.1 vs. uniprot
Match: A0A2W6T944_9HYPH (AraC family transcriptional regulator n=2 Tax=Rhizobiaceae TaxID=82115 RepID=A0A2W6T944_9HYPH)

HSP 1 Score: 256 bits (655), Expect = 2.920e-80
Identity = 149/329 (45.29%), Postives = 207/329 (62.92%), Query Frame = 1
Query:    1 IPMIISLLLFAFLAHRMLTRETHVTLLALIAACAVQGAIVALVQYYGFTSIRPLQPLWATLIPPIAWLAFSQAARGDTKPGDVPLHSAGFVLALLFLLLQPQLLDVWIPLLFAGYGITMMLQLVRGEDSLPHSRLESGTMPLLAWRIIAISLIASAASDVFIAYNLAAGENGVLLWVPSVFSSLILLSLGAVSLSYAIESHHDDGGEDSGLSSEDAERDQSIVTKLDEYVQTRKPFLDPDLTLSRLSRRMLIPAKQLSAAINRVKGENVSRYINRHRIDHACGMMSGGNSVTDAMLSSGFNTKSNFNREFLRVKGENPRKWLESQSWQP 987
            IP+++SL+L   L   +  R+     LAL+AAC VQG IV+L Q+YGFT +  +QP+ AT IPP+AW+ F  AA          +H A     L  +LL PQ LD  +P +F  YG  M+  L  G D LP ++L++G +P+  WR IA++L+ SA SD  IA  LA G + +   + SVFSSL LL++GA+SLS +I        E  G   E +E D +++ +L   ++T K +LDP +TL+RL+RR+ +P K+LS A+NR  G+NVSRYIN  RI HAC  +  G ++T +ML SGFNTKSNFNREFLRV G++P  WL  Q  +P
Sbjct:    6 IPLVVSLVLGFLLVRALFARQRPRPFLALLAACTVQGVIVSLSQHYGFTGVLAVQPVTATAIPPLAWVTFQTAAIRTADIRRDAMHVAAPAFTLFCVLLAPQALDFVVPAVFLVYGALMLAALRAGADGLPLTQLDAGDLPMHVWRAIAVALMLSALSDGMIAAALAYGIHWLQPIIVSVFSSLWLLAIGALSLSQSIGEGDAAPAERPG---EPSEPDTALMVELQTILETEKLYLDPGMTLARLARRLHVPVKRLSTAVNRASGDNVSRYINGFRIRHACQRLEEGANITASMLDSGFNTKSNFNREFLRVMGQSPSDWLAGQVAKP 331          
BLAST of mRNA_P-wetherbeei_contig20901.1.1 vs. uniprot
Match: A0A5C4JM68_9HYPH (Helix-turn-helix transcriptional regulator n=1 Tax=Martelella lutilitoris TaxID=2583532 RepID=A0A5C4JM68_9HYPH)

HSP 1 Score: 256 bits (654), Expect = 3.880e-80
Identity = 151/327 (46.18%), Postives = 206/327 (63.00%), Query Frame = 1
Query:    1 IPMIISLLLFAFLAHRMLTRETHVTLLAL-IAACAVQGAIVALVQYYGFTSIRPLQPLWATLIPPIAWLAFSQAARGDTKPGDVPLHSAGFVLALLFLLLQPQLLDVWIPLLFAGYGITMMLQLVRGEDSLPHSRLESGTMPLLAWRIIAISLIASAASDVFIAYNLAAGENGVLLWVPSVFSSLILLSLGAVSLSYAIESHHDDGGEDSGLSSEDAERDQSIVTKLDEYVQTRKPFLDPDLTLSRLSRRMLIPAKQLSAAINRVKGENVSRYINRHRIDHACGMMSGGNSVTDAMLSSGFNTKSNFNREFLRVKGENPRKWLESQS 978
            +PM+ +L+L  F+  RML  E     +A+ ++ACA+QG IVALVQYYG   ++P+QP+ A+++P  AWLAF  +     +PG   +H       L  +L  P  +D  IPL+F  YG  ++L L  G D+LP +RLE+G  P   W  IA SL+ SA SD  IAY +AAG   +   + S+F+S  LL+ G +SLS       D          E +E D +IV +LD  ++    +LDP LTLSRL+RR+ +PAK LS AINRV GENVSR+INR RI+HAC  +  G++VT AMLSSGFNTKSNFNREF R+ G++P  WL+ Q+
Sbjct:    6 VPMVTALVL-GFMVLRMLAGERRPLAIAVFLSACALQGLIVALVQYYGVAFLQPVQPVTASVVPVCAWLAFRSSFIEPIRPGRDFIHLVAPTFTLFCVLFAPVTVDAIIPLVFLAYGARILLTLKTGGDALPLARLEAGRQPQWLWTGIAASLLLSAVSDTLIAYVIAAGAPALKPLIVSIFTSAALLAAGLLSLSPNAFGEGDPKEAARPFPPEASEADTAIVARLDALMRAEPLYLDPALTLSRLARRLKLPAKTLSTAINRVTGENVSRHINRFRIEHACKRLKAGDTVTTAMLSSGFNTKSNFNREFTRLTGKSPTAWLDGQT 331          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20901.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A521E8L3_9RHOB9.340e-12760.80Transcriptional regulator, AraC family n=1 Tax=Rue... [more]
A0A1I6PXG4_9RHOB7.140e-12558.77AraC-type DNA-binding protein n=1 Tax=Sulfitobacte... [more]
A0A238Y4M1_9RHOB1.300e-12259.26Transcriptional regulator, AraC family n=1 Tax=Pun... [more]
A0A847ZVP2_9HYPH1.320e-12258.90Helix-turn-helix transcriptional regulator n=1 Tax... [more]
UPI001C5DB0395.830e-12258.90AraC family transcriptional regulator n=1 Tax=Sulf... [more]
A0A4V2V4S4_9HYPH8.540e-8246.79AraC family transcriptional regulator n=1 Tax=Mart... [more]
A0A510X5H7_9GAMM2.000e-8146.25AraC family transcriptional regulator n=1 Tax=Halo... [more]
A0A1H4KAK0_9HYPH1.390e-8047.20Transcriptional regulator, AraC family n=7 Tax=Nit... [more]
A0A2W6T944_9HYPH2.920e-8045.29AraC family transcriptional regulator n=2 Tax=Rhiz... [more]
A0A5C4JM68_9HYPH3.880e-8046.18Helix-turn-helix transcriptional regulator n=1 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig20901contigP-wetherbeei_contig20901:2..1009 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1231185.BAMP01000135_gene1108
PFAMsHTH_18
Model size1008
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categorysignal peptide
Exons1
Evalue2.86e-80
EggNOG OGsCOG2207@1|root,COG2207@2|Bacteria,1P4M5@1224|Proteobacteria,2V7HB@28211|Alphaproteobacteria,43PR5@69277|Phyllobacteriaceae
Descriptionhelix_turn_helix, arabinose operon control protein
Cds size1002
COG categoryK
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186211.6268938-UTR-P-wetherbeei_contig20901:1..71683186211.6268938-UTR-P-wetherbeei_contig20901:1..7Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig20901 2..7 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186211.6354299-CDS-P-wetherbeei_contig20901:7..10091683186211.6354299-CDS-P-wetherbeei_contig20901:7..1009Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig20901 8..1009 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig20901.1.1prot_P-wetherbeei_contig20901.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig20901 8..1009 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig20901.1.1

>prot_P-wetherbeei_contig20901.1.1 ID=prot_P-wetherbeei_contig20901.1.1|Name=mRNA_P-wetherbeei_contig20901.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=334bp
MIISLLLFAFLAHRMLTRETHVTLLALIAACAVQGAIVALVQYYGFTSIR
PLQPLWATLIPPIAWLAFSQAARGDTKPGDVPLHSAGFVLALLFLLLQPQ
LLDVWIPLLFAGYGITMMLQLVRGEDSLPHSRLESGTMPLLAWRIIAISL
IASAASDVFIAYNLAAGENGVLLWVPSVFSSLILLSLGAVSLSYAIESHH
DDGGEDSGLSSEDAERDQSIVTKLDEYVQTRKPFLDPDLTLSRLSRRMLI
PAKQLSAAINRVKGENVSRYINRHRIDHACGMMSGGNSVTDAMLSSGFNT
KSNFNREFLRVKGENPRKWLESQSWQPLPSAKK*
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mRNA from alignment at P-wetherbeei_contig20901:2..1009+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig20901.1.1 ID=mRNA_P-wetherbeei_contig20901.1.1|Name=mRNA_P-wetherbeei_contig20901.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1008bp|location=Sequence derived from alignment at P-wetherbeei_contig20901:2..1009+ (Phaeothamnion wetherbeei SAG_119_79)
ATCCCCATGATTATTTCGCTCTTGCTGTTTGCCTTTCTGGCGCACCGCAT GTTGACGCGTGAAACGCATGTCACCCTGCTGGCCCTTATTGCGGCTTGTG CCGTGCAAGGCGCCATCGTGGCGCTGGTGCAATACTATGGCTTTACCTCC ATCCGGCCTTTGCAGCCCTTGTGGGCCACTCTGATTCCGCCCATTGCGTG GCTGGCCTTCAGCCAGGCGGCACGAGGTGATACAAAGCCTGGCGACGTGC CATTACATTCAGCGGGCTTCGTGTTGGCGCTCCTGTTCCTTCTGCTGCAA CCACAACTGCTCGACGTTTGGATTCCACTTCTGTTTGCGGGTTACGGCAT CACCATGATGCTGCAGCTGGTGCGCGGTGAAGACAGCCTGCCGCACAGCC GACTGGAAAGCGGTACAATGCCACTGCTGGCATGGCGGATTATCGCAATA TCGCTGATAGCCTCCGCGGCCTCCGATGTGTTCATCGCGTACAACCTGGC GGCCGGTGAAAATGGCGTTCTGTTGTGGGTGCCCAGCGTTTTTTCGTCGC TTATTTTGCTCAGTCTCGGGGCGGTGAGCCTGTCGTATGCCATCGAAAGC CACCACGATGATGGGGGCGAAGACAGCGGTCTTTCATCGGAAGACGCTGA AAGGGACCAATCGATTGTCACGAAGCTCGATGAATATGTTCAGACACGGA AGCCCTTTCTCGACCCGGACCTGACCTTGTCACGTCTCTCCCGGCGAATG CTGATTCCGGCAAAGCAGCTTTCGGCTGCAATCAACAGGGTAAAAGGCGA AAATGTATCCCGCTATATCAACCGTCATCGCATCGACCATGCCTGCGGGA TGATGTCAGGGGGAAATTCGGTTACCGATGCGATGTTGTCGAGCGGCTTC AACACCAAATCAAATTTCAACCGCGAATTTCTGAGGGTGAAGGGTGAAAA TCCCCGTAAGTGGCTGGAGAGCCAGTCCTGGCAACCCTTACCTTCTGCAA AGAAATAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig20901:2..1009+

>mRNA_P-wetherbeei_contig20901.1.1 ID=mRNA_P-wetherbeei_contig20901.1.1|Name=mRNA_P-wetherbeei_contig20901.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1002bp|location=Sequence derived from alignment at P-wetherbeei_contig20901:2..1009+ (Phaeothamnion wetherbeei SAG_119_79)
ATGATTATTTCGCTCTTGCTGTTTGCCTTTCTGGCGCACCGCATGTTGAC
GCGTGAAACGCATGTCACCCTGCTGGCCCTTATTGCGGCTTGTGCCGTGC
AAGGCGCCATCGTGGCGCTGGTGCAATACTATGGCTTTACCTCCATCCGG
CCTTTGCAGCCCTTGTGGGCCACTCTGATTCCGCCCATTGCGTGGCTGGC
CTTCAGCCAGGCGGCACGAGGTGATACAAAGCCTGGCGACGTGCCATTAC
ATTCAGCGGGCTTCGTGTTGGCGCTCCTGTTCCTTCTGCTGCAACCACAA
CTGCTCGACGTTTGGATTCCACTTCTGTTTGCGGGTTACGGCATCACCAT
GATGCTGCAGCTGGTGCGCGGTGAAGACAGCCTGCCGCACAGCCGACTGG
AAAGCGGTACAATGCCACTGCTGGCATGGCGGATTATCGCAATATCGCTG
ATAGCCTCCGCGGCCTCCGATGTGTTCATCGCGTACAACCTGGCGGCCGG
TGAAAATGGCGTTCTGTTGTGGGTGCCCAGCGTTTTTTCGTCGCTTATTT
TGCTCAGTCTCGGGGCGGTGAGCCTGTCGTATGCCATCGAAAGCCACCAC
GATGATGGGGGCGAAGACAGCGGTCTTTCATCGGAAGACGCTGAAAGGGA
CCAATCGATTGTCACGAAGCTCGATGAATATGTTCAGACACGGAAGCCCT
TTCTCGACCCGGACCTGACCTTGTCACGTCTCTCCCGGCGAATGCTGATT
CCGGCAAAGCAGCTTTCGGCTGCAATCAACAGGGTAAAAGGCGAAAATGT
ATCCCGCTATATCAACCGTCATCGCATCGACCATGCCTGCGGGATGATGT
CAGGGGGAAATTCGGTTACCGATGCGATGTTGTCGAGCGGCTTCAACACC
AAATCAAATTTCAACCGCGAATTTCTGAGGGTGAAGGGTGAAAATCCCCG
TAAGTGGCTGGAGAGCCAGTCCTGGCAACCCTTACCTTCTGCAAAGAAAT
AA
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