mRNA_P-wetherbeei_contig20901.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig20901.1.1 vs. uniprot
Match: A0A521E8L3_9RHOB (Transcriptional regulator, AraC family n=1 Tax=Ruegeria faecimaris TaxID=686389 RepID=A0A521E8L3_9RHOB) HSP 1 Score: 375 bits (963), Expect = 9.340e-127 Identity = 197/324 (60.80%), Postives = 244/324 (75.31%), Query Frame = 1
Query: 1 IPMIISLLLFAFLAHRMLTRETHVTLLALIAACAVQGAIVALVQYYGFTSIRPLQPLWATLIPPIAWLAFSQAARGDTKPGDVPLHSAGFVLALLFLLLQPQLLDVWIPLLFAGYGITMMLQLVRGEDSLPHSRLESGTMPLLAWRIIAISLIASAASDVFIAYNLAAGENGVLLWVPSVFSSLILLSLGAVSLSYAIESHHDDGGEDSGLSSEDAERDQSIVTKLDEYVQTRKPFLDPDLTLSRLSRRMLIPAKQLSAAINRVKGENVSRYINRHRIDHACGMMSGGNSVTDAMLSSGFNTKSNFNREFLRVKGENPRKWLES 972
IPMI +LLL FL HR LTR+TH TLL LI CA Q A++ALVQYYGFT +R +QP+ AT+I AWL+F QA+ G + D+ LH+ G LA+ FL QP+ LDV IP LFA YGI + L+RGED LPHSRLE+G M + WR++AI+LIASA SD+FIA LA+G+ VLLW+PS+FS++ LL LGA+SLS+AIES S +D RD +IV KLD Y++T KP+LDPDLTL+RL+R++ +P KQLS+AIN+ K ENVSRYINRHRI HAC +M G SVT+AML+SGFNTKSNFNREFLRV G NPR+WL S
Sbjct: 6 IPMITALLLSGFLLHRFLTRKTHPTLLVLIGCCAAQSAVIALVQYYGFTGLRVVQPILATVIAASAWLSFRQASVGYLRRQDLYLHAVGPALAISFLATQPEALDVLIPFLFAAYGIAIAFMLLRGEDCLPHSRLENGRMIVWVWRVLAIALIASAGSDIFIAVRLASGDTEVLLWLPSLFSAITLLILGALSLSHAIESQSIGSDTRDAYSKQDKTRDTAIVEKLDAYMETHKPYLDPDLTLARLARKLQVPEKQLSSAINKGKSENVSRYINRHRISHACAVMKTGKSVTEAMLASGFNTKSNFNREFLRVIGVNPRRWLRS 329
BLAST of mRNA_P-wetherbeei_contig20901.1.1 vs. uniprot
Match: A0A1I6PXG4_9RHOB (AraC-type DNA-binding protein n=1 Tax=Sulfitobacter marinus TaxID=394264 RepID=A0A1I6PXG4_9RHOB) HSP 1 Score: 370 bits (950), Expect = 7.140e-125 Identity = 191/325 (58.77%), Postives = 252/325 (77.54%), Query Frame = 1
Query: 1 IPMIISLLLFAFLAHRMLTRETHVTLLALIAACAVQGAIVALVQYYGFTSIRPLQPLWATLIPPIAWLAFSQAARGDTKPGDVPLHSA-GFVLALLFLLLQPQLLDVWIPLLFAGYGITMMLQLVRGEDSLPHSRLESGTMPLLAWRIIAISLIASAASDVFIAYNLAAGENGVLLWVPSVFSSLILLSLGAVSLSYAIESHHDDGGEDSGLSSEDAERDQSIVTKLDEYVQTRKPFLDPDLTLSRLSRRMLIPAKQLSAAINRVKGENVSRYINRHRIDHACGMMSGGNSVTDAMLSSGFNTKSNFNREFLRVKGENPRKWLES 972
+PMI+SLLL F+ HRMLTR+TH+TLL LI CAVQ AI+ALVQYYG S+R +Q L AT+IP IAWLAF QA+ G + ++ +H G VLA++ +++ P LDV IP LFAGYG+ +++ L +GEDSLPHSRLE+G + +L WR++A++LI SAA+D+FIA ++ G + +LLW+PS+ SS+ LL LGA+ LS+AIES E S + +D +RD +IV KL+ Y++T KP+LDPDL+LSRLSR++L+P KQLS+AIN+ KGENVSRYIN HR+ HAC M+ G SVTDAM +SGFNTKSNFNREFLRV G NPR W++S
Sbjct: 6 VPMIVSLLLLGFVLHRMLTRKTHITLLVLITVCAVQSAIIALVQYYGVPSLRIVQALLATIIPAIAWLAFRQASAGHLRNQNIYIHLVIGPVLAVIGMIVNPDWLDVVIPSLFAGYGLAILIVLRQGEDSLPHSRLENGYLIVLVWRVLALALIGSAATDIFIAVRISLGHSDMLLWLPSLLSSITLLILGAIGLSHAIESQDAPQAERSPDTEQDRKRDSAIVEKLETYIETNKPYLDPDLSLSRLSRKLLVPEKQLSSAINKYKGENVSRYINAHRVQHACLMIQDGASVTDAMFASGFNTKSNFNREFLRVMGTNPRLWMKS 330
BLAST of mRNA_P-wetherbeei_contig20901.1.1 vs. uniprot
Match: A0A238Y4M1_9RHOB (Transcriptional regulator, AraC family n=1 Tax=Puniceibacterium sediminis TaxID=1608407 RepID=A0A238Y4M1_9RHOB) HSP 1 Score: 364 bits (935), Expect = 1.300e-122 Identity = 192/324 (59.26%), Postives = 244/324 (75.31%), Query Frame = 1
Query: 1 IPMIISLLLFAFLAHRMLTRETHVTLLALIAACAVQGAIVALVQYYGFTSIRPLQPLWATLIPPIAWLAFSQAARGDTKPGDVPLHSAGFVLALLFLLLQPQLLDVWIPLLFAGYGITMMLQLVRGEDSLPHSRLESGTMPLLAWRIIAISLIASAASDVFIAYNLAAGENGVLLWVPSVFSSLILLSLGAVSLSYAIESHHDDGGEDSGLSSEDAERDQSIVTKLDEYVQTRKPFLDPDLTLSRLSRRMLIPAKQLSAAINRVKGENVSRYINRHRIDHACGMMSGGNSVTDAMLSSGFNTKSNFNREFLRVKGENPRKWLES 972
IPMII+LLL FL HR LTRETH LL LI CA Q A++ALVQYYG T +R +QPL AT+IP ++WLAF QA+ G D LH G V A++ L + P+ LDV IP LFAGYGI + + L+RGEDSLPHSRLE+G M +L WR++A++L+ASA +D+FIA LA+G VLLW+PS+FSS+ LL LGA+ LS+AI+S + S +D RD +IV KL Y++ KP+LDPDLTL+RL+R++ +P KQ+S+AIN+ +GENVSRYINRHRI HAC +M G SVT+AML+SGFNTKSNFNREFLRV G +PR WL+S
Sbjct: 6 IPMIIALLLSGFLLHRALTRETHPALLVLIGCCAAQSAVIALVQYYGLTGLRIVQPLLATVIPAVSWLAFRQASVGYLGRHD-HLHLLGPVAAVVCLAISPEALDVLIPALFAGYGIAIAVALLRGEDSLPHSRLENGRMTVLVWRVLAVALVASAGTDIFIAIRLASGHANVLLWLPSLFSSVTLLVLGALGLSHAIDSQSTSPDARTEYSVQDKNRDTAIVEKLATYLEAHKPYLDPDLTLARLARKLQVPEKQVSSAINKAQGENVSRYINRHRIHHACALMQDGKSVTEAMLASGFNTKSNFNREFLRVMGASPRLWLKS 328
BLAST of mRNA_P-wetherbeei_contig20901.1.1 vs. uniprot
Match: A0A847ZVP2_9HYPH (Helix-turn-helix transcriptional regulator n=1 Tax=Phyllobacteriaceae bacterium TaxID=1871068 RepID=A0A847ZVP2_9HYPH) HSP 1 Score: 365 bits (937), Expect = 1.320e-122 Identity = 192/326 (58.90%), Postives = 248/326 (76.07%), Query Frame = 1
Query: 1 IPMIISLLLFAFLAHRMLTRETHVTLLALIAACAVQGAIVALVQYYGFTSIRPLQPLWATLIPPIAWLAFSQAARGDTKPGD----VPLHSAGFVLALLFLLLQPQLLDVWIPLLFAGYGITMMLQLVRGEDSLPHSRLESGTMPLLAWRIIAISLIASAASDVFIAYNLAAGENGVLLWVPSVFSSLILLSLGAVSLSYAIESHHDDGGEDSGLSSEDAERDQSIVTKLDEYVQTRKPFLDPDLTLSRLSRRMLIPAKQLSAAINRVKGENVSRYINRHRIDHACGMMSGGNSVTDAMLSSGFNTKSNFNREFLRVKGENPRKWL 966
+P+II+LLL FL R+ ETH++LLALIA CAVQ AI+ALVQYYG +RP+QPL AT+IPPIAW AF +A+ G + LH+ G +L L L++ P LD IPL F YG+ M+ +L GEDSLPHS L+ G L+AWRI+A++LIASA DV IAY LA G++GVL W+PSV SSL LLSLGA+SL+ A+E+ + G+D+ ++E+ ERDQ+IV +LDEYV+++KP+LDPDLTL+RLSR++++PAKQLS+AINRVKGENVSRY+NR RI+HAC ++ G SVT AML SGFNTKSNFNREFLR + PR W+
Sbjct: 6 VPLIIALLLLGFLVLRIARDETHISLLALIAVCAVQAAIIALVQYYGVAPLRPVQPLLATVIPPIAWFAFERASGGQASARASAWAMALHAIGPILGLFCLIVNPMFLDALIPLSFTCYGVAMLTRLWAGEDSLPHSLLDGGGASLMAWRIVALALIASAGCDVLIAYGLAHGQSGVLGWIPSVVSSLSLLSLGALSLTNAVEARREALGDDATPNAEELERDQAIVARLDEYVKSQKPYLDPDLTLARLSRKLIVPAKQLSSAINRVKGENVSRYVNRKRIEHACTLLERGASVTTAMLDSGFNTKSNFNREFLRTRKLAPRDWV 331
BLAST of mRNA_P-wetherbeei_contig20901.1.1 vs. uniprot
Match: UPI001C5DB039 (AraC family transcriptional regulator n=1 Tax=Sulfitobacter sp. CW3 TaxID=2861965 RepID=UPI001C5DB039) HSP 1 Score: 363 bits (931), Expect = 5.830e-122 Identity = 192/326 (58.90%), Postives = 249/326 (76.38%), Query Frame = 1
Query: 1 IPMIISLLLFAFLAHRMLTRETHVTLLALIAACAVQGAIVALVQYYGFTSIRPLQPLWATLIPPIAWLAFSQAARGDTKPGDVPLH-SAGFVLALLFLLLQPQLLDVWIPLLFAGYGITMMLQLVRGEDSLPHSRLESGTMPLLAWRIIAISLIASAASDVFIAYNLAAGENGVLLWVPSVFSSLILLSLGAVSLSYAIESHHDDGGEDSGLSSEDAERDQSIVTKLDEYVQTRKPFLDPDLTLSRLSRRMLIPAKQLSAAINRVKGENVSRYINRHRIDHACGMMSGGNSVTDAMLSSGFNTKSNFNREFLRVKGENPRKWLESQ 975
+PMIISL+L + HR LT +THVTLLALIA CA+Q AI+ALVQYYG +S+R +Q L A++IP IAWLAF QA+ G + +H G LA+ L++ P LDV IP LFAGYG +++ L +GEDSLPHSRLE+G + +L WRI+A++LI SAA+D+FIA LA+G + +LLW+PS+ SS+ LL LGA+ LS+AIES +D E S + +D +RD +I+ KL+ Y+ KP+LDPDL+LSRL+R++LIP KQLS+AIN+ KGENVSRYIN HR+ HAC MM G SVT+AM +SGFNTKSNFNREFLRV G NPR WL+S+
Sbjct: 6 VPMIISLVLLGLVLHRFLTGKTHVTLLALIAVCALQSAIIALVQYYGISSLRIVQGLVASIIPAIAWLAFRQASAGHLRNQKPYVHLMIGPALAVACLIINPNWLDVVIPSLFAGYGFAILIILRQGEDSLPHSRLENGYLIVLVWRILALALIGSAATDIFIALRLASGHSDMLLWLPSLLSSITLLVLGALGLSHAIESQNDPRSERSPDTDQDKDRDTAIIEKLETYIAMHKPYLDPDLSLSRLARKLLIPEKQLSSAINKYKGENVSRYINAHRVQHACAMMQDGTSVTEAMFASGFNTKSNFNREFLRVVGANPRLWLKSR 331
BLAST of mRNA_P-wetherbeei_contig20901.1.1 vs. uniprot
Match: A0A4V2V4S4_9HYPH (AraC family transcriptional regulator n=1 Tax=Martelella mediterranea TaxID=293089 RepID=A0A4V2V4S4_9HYPH) HSP 1 Score: 260 bits (665), Expect = 8.540e-82 Identity = 153/327 (46.79%), Postives = 209/327 (63.91%), Query Frame = 1
Query: 1 IPMIISLLLFAFLAHRMLTRETHVTLLAL-IAACAVQGAIVALVQYYGFTSIRPLQPLWATLIPPIAWLAFSQAARGDTKPGDVPLHSAGFVLALLFLLLQPQLLDVWIPLLFAGYGITMMLQLVRGEDSLPHSRLESGTMPLLAWRIIAISLIASAASDVFIAYNLAAGENGVLLWVPSVFSSLILLSLGAVSLSYAIESHHDDGGEDSGLSSEDAERDQSIVTKLDEYVQTRKPFLDPDLTLSRLSRRMLIPAKQLSAAINRVKGENVSRYINRHRIDHACGMMSGGNSVTDAMLSSGFNTKSNFNREFLRVKGENPRKWLESQS 978
+P++ +L+L F+ RML E A+ ++ACA+QG +VALV YYG T +RP+QP+ ATL+P +AWLAF + +H A L ++ P +D IPL+F GYG+ ++L L D+LP +RLE+G P W IA SL+ SA SD IAY +AAG + + S+F+S+ LL+ G +SLS D E +E D +IV +LD ++ P+LDPDLTLSRL+RR+ +PAK LS+AINR GENVSR+INR RIDHAC + G++VT AMLSSGFNTKSNFNREF+RV G++P WL+ Q+
Sbjct: 6 VPLVTALVL-GFMVLRMLAGERRPFETAVFLSACALQGLLVALVLYYGLTWLRPVQPVTATLVPALAWLAFRSSFIAPLNLKRDFIHLAAPAFTLFCVIFAPVTVDAVIPLIFLGYGLWILLALKARGDALPLARLEAGRQPQWLWAGIATSLLLSAVSDTLIAYVIAAGAPSLKPLIVSIFTSVALLAAGLLSLSPNAFGEGDPKEVARPEPPEASEADTAIVARLDALMRAETPYLDPDLTLSRLARRLKLPAKTLSSAINRATGENVSRHINRFRIDHACARLKAGDNVTAAMLSSGFNTKSNFNREFIRVTGKSPTAWLDGQA 331
BLAST of mRNA_P-wetherbeei_contig20901.1.1 vs. uniprot
Match: A0A510X5H7_9GAMM (AraC family transcriptional regulator n=1 Tax=Halomonas pacifica TaxID=77098 RepID=A0A510X5H7_9GAMM) HSP 1 Score: 259 bits (663), Expect = 2.000e-81 Identity = 154/333 (46.25%), Postives = 213/333 (63.96%), Query Frame = 1
Query: 1 IPMIISLLLFAFLAHRMLTRETHV-TLLALIAACAVQGAIVALVQYYGFTSIRPLQPLWATLIPPIAWLAFSQAARGDTKPGDVPLHSAGFVLALLFLLLQPQLLDVWIPLLFAGYGITMMLQLVRGEDSLPHSRLESGTMPLLAWRIIAISLIASAASDVFIAYNLAAGENGVLLWVPSVFSSLILLSLGAVSLSYAIESHHDDG---GEDSGLSSEDAERDQSIVTKLDEYVQTRKPFLDPDLTLSRLSRRMLIPAKQLSAAINRVKGENVSRYINRHRIDHACGMMSGGNSVTDAMLSSGFNTKSNFNREFLRVKGENPRKWLESQSWQP 987
IPMI+++LL A+LA L R + LI ACAVQG +++L Q+YG T +QP+ ATLIPP+AW+ F A P H + PQ+LD+ IP F YG+ +++ L +G +LP RLESG P L WR+IA++LIASA SD+ I + G+ + W+ VFSSLILL LGA+ LS ++ES ++ E + D E++++++ +LD V ++ FLDP LTL+RLSR++ +PAK LS+ IN+ GENVSRYIN +RI+HAC + G SVT AML+SGFNTKSNFNREF RVKG PR+WL +++ P
Sbjct: 6 IPMIVAILL-AYLAILTLARRDRPWPFVLLILACAVQGTVISLNQHYGVTLFHTVQPVTATLIPPLAWIIFQVTAIRAFAPSRHLPHLLLPAFVAFCMAFAPQVLDIVIPSGFVAYGVALLIALKQGPGNLPLPRLESGERPGLIWRVIALALIASAFSDILILLDQVLGQGRLQAWIIGVFSSLILLVLGALCLSRSLESEPNEACPAAEPPPVM--DLEQNRALIERLDHLVTSQTLFLDPGLTLNRLSRKLGVPAKLLSSTINQTTGENVSRYINAYRIEHACLQLEAGESVTSAMLNSGFNTKSNFNREFRRVKGHAPREWLATRAAVP 335
BLAST of mRNA_P-wetherbeei_contig20901.1.1 vs. uniprot
Match: A0A1H4KAK0_9HYPH (Transcriptional regulator, AraC family n=7 Tax=Nitratireductor TaxID=245876 RepID=A0A1H4KAK0_9HYPH) HSP 1 Score: 258 bits (659), Expect = 1.390e-80 Identity = 152/322 (47.20%), Postives = 209/322 (64.91%), Query Frame = 1
Query: 1 IPMIISLLLFAFLAHRMLTRETHVTLLALIAACAVQGAIVALVQYYGFTSIRPLQPLWATLIPPIAWLAFSQAA-RGDTKPGDVPLHSAGFVLALLFLLLQPQLLDVWIPLLFAGYGITMMLQLVRGEDSLPHSRLESGTMPLLAWRIIAISLIASAASDVFIAYNLAAGENGVLLWVPSVFSSLILLSLGAVSLSYAIESHHDDGGEDSGLSSEDAERDQSIVTKLDEYVQTRKPFLDPDLTLSRLSRRMLIPAKQLSAAINRVKGENVSRYINRHRIDHACGMMSGGNSVTDAMLSSGFNTKSNFNREFLRVKGENPRKW 963
IPMII+L+L AFL ++ E L+AL+AACA+Q IV+L Q+YG ++ PLQP+ AT +PP+ WLAF A+ R + P D+ +H A A ++ P LD +P +F YG+ ++++L R D LP +RLE+G +P W I ++LI SA SD IA + G+ G+ + SVFSS LL++G +S+S + E + +E D +V +LD +QT +LDP LTL+RL+RR+ +PAKQLS+AIN V GENVSRYINRHRI HAC + G +VT+AMLSSGFNTKSNFNREF R+ G PR+W
Sbjct: 28 IPMIIALVLGAFLIRIAISGERPPFLMALLAACALQSLIVSLRQHYGIGALLPLQPITATFVPPLTWLAFQTASFRPFSLPRDL-VHLAAPAFAAFCVVFAPGTLDTVVPAIFVLYGLAILVKLHRSGDDLPLARLEAGRLPARIWGGIGLALILSALSDALIALAIMTGQTGLPPVIVSVFSSAALLAIGLLSISPNAMGETE--AESPPQNPHPSEEDAHLVQRLDALLQTDTLYLDPALTLARLARRLHVPAKQLSSAINLVNGENVSRYINRHRIHHACRALEDGANVTEAMLSSGFNTKSNFNREFRRITGTTPREW 346
BLAST of mRNA_P-wetherbeei_contig20901.1.1 vs. uniprot
Match: A0A2W6T944_9HYPH (AraC family transcriptional regulator n=2 Tax=Rhizobiaceae TaxID=82115 RepID=A0A2W6T944_9HYPH) HSP 1 Score: 256 bits (655), Expect = 2.920e-80 Identity = 149/329 (45.29%), Postives = 207/329 (62.92%), Query Frame = 1
Query: 1 IPMIISLLLFAFLAHRMLTRETHVTLLALIAACAVQGAIVALVQYYGFTSIRPLQPLWATLIPPIAWLAFSQAARGDTKPGDVPLHSAGFVLALLFLLLQPQLLDVWIPLLFAGYGITMMLQLVRGEDSLPHSRLESGTMPLLAWRIIAISLIASAASDVFIAYNLAAGENGVLLWVPSVFSSLILLSLGAVSLSYAIESHHDDGGEDSGLSSEDAERDQSIVTKLDEYVQTRKPFLDPDLTLSRLSRRMLIPAKQLSAAINRVKGENVSRYINRHRIDHACGMMSGGNSVTDAMLSSGFNTKSNFNREFLRVKGENPRKWLESQSWQP 987
IP+++SL+L L + R+ LAL+AAC VQG IV+L Q+YGFT + +QP+ AT IPP+AW+ F AA +H A L +LL PQ LD +P +F YG M+ L G D LP ++L++G +P+ WR IA++L+ SA SD IA LA G + + + SVFSSL LL++GA+SLS +I E G E +E D +++ +L ++T K +LDP +TL+RL+RR+ +P K+LS A+NR G+NVSRYIN RI HAC + G ++T +ML SGFNTKSNFNREFLRV G++P WL Q +P
Sbjct: 6 IPLVVSLVLGFLLVRALFARQRPRPFLALLAACTVQGVIVSLSQHYGFTGVLAVQPVTATAIPPLAWVTFQTAAIRTADIRRDAMHVAAPAFTLFCVLLAPQALDFVVPAVFLVYGALMLAALRAGADGLPLTQLDAGDLPMHVWRAIAVALMLSALSDGMIAAALAYGIHWLQPIIVSVFSSLWLLAIGALSLSQSIGEGDAAPAERPG---EPSEPDTALMVELQTILETEKLYLDPGMTLARLARRLHVPVKRLSTAVNRASGDNVSRYINGFRIRHACQRLEEGANITASMLDSGFNTKSNFNREFLRVMGQSPSDWLAGQVAKP 331
BLAST of mRNA_P-wetherbeei_contig20901.1.1 vs. uniprot
Match: A0A5C4JM68_9HYPH (Helix-turn-helix transcriptional regulator n=1 Tax=Martelella lutilitoris TaxID=2583532 RepID=A0A5C4JM68_9HYPH) HSP 1 Score: 256 bits (654), Expect = 3.880e-80 Identity = 151/327 (46.18%), Postives = 206/327 (63.00%), Query Frame = 1
Query: 1 IPMIISLLLFAFLAHRMLTRETHVTLLAL-IAACAVQGAIVALVQYYGFTSIRPLQPLWATLIPPIAWLAFSQAARGDTKPGDVPLHSAGFVLALLFLLLQPQLLDVWIPLLFAGYGITMMLQLVRGEDSLPHSRLESGTMPLLAWRIIAISLIASAASDVFIAYNLAAGENGVLLWVPSVFSSLILLSLGAVSLSYAIESHHDDGGEDSGLSSEDAERDQSIVTKLDEYVQTRKPFLDPDLTLSRLSRRMLIPAKQLSAAINRVKGENVSRYINRHRIDHACGMMSGGNSVTDAMLSSGFNTKSNFNREFLRVKGENPRKWLESQS 978
+PM+ +L+L F+ RML E +A+ ++ACA+QG IVALVQYYG ++P+QP+ A+++P AWLAF + +PG +H L +L P +D IPL+F YG ++L L G D+LP +RLE+G P W IA SL+ SA SD IAY +AAG + + S+F+S LL+ G +SLS D E +E D +IV +LD ++ +LDP LTLSRL+RR+ +PAK LS AINRV GENVSR+INR RI+HAC + G++VT AMLSSGFNTKSNFNREF R+ G++P WL+ Q+
Sbjct: 6 VPMVTALVL-GFMVLRMLAGERRPLAIAVFLSACALQGLIVALVQYYGVAFLQPVQPVTASVVPVCAWLAFRSSFIEPIRPGRDFIHLVAPTFTLFCVLFAPVTVDAIIPLVFLAYGARILLTLKTGGDALPLARLEAGRQPQWLWTGIAASLLLSAVSDTLIAYVIAAGAPALKPLIVSIFTSAALLAAGLLSLSPNAFGEGDPKEAARPFPPEASEADTAIVARLDALMRAEPLYLDPALTLSRLARRLKLPAKTLSTAINRVTGENVSRHINRFRIEHACKRLKAGDTVTTAMLSSGFNTKSNFNREFTRLTGKSPTAWLDGQT 331 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20901.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig20901.1.1 >prot_P-wetherbeei_contig20901.1.1 ID=prot_P-wetherbeei_contig20901.1.1|Name=mRNA_P-wetherbeei_contig20901.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=334bp MIISLLLFAFLAHRMLTRETHVTLLALIAACAVQGAIVALVQYYGFTSIRback to top mRNA from alignment at P-wetherbeei_contig20901:2..1009+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig20901.1.1 ID=mRNA_P-wetherbeei_contig20901.1.1|Name=mRNA_P-wetherbeei_contig20901.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1008bp|location=Sequence derived from alignment at P-wetherbeei_contig20901:2..1009+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig20901:2..1009+ >mRNA_P-wetherbeei_contig20901.1.1 ID=mRNA_P-wetherbeei_contig20901.1.1|Name=mRNA_P-wetherbeei_contig20901.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1002bp|location=Sequence derived from alignment at P-wetherbeei_contig20901:2..1009+ (Phaeothamnion wetherbeei SAG_119_79)back to top |