prot_P-wetherbeei_contig20796.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig20796.1.1
Unique Nameprot_P-wetherbeei_contig20796.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length109
Homology
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BLAST of mRNA_P-wetherbeei_contig20796.1.1 vs. uniprot
Match: UPI001E2F5250 (porin family protein n=1 Tax=Rhizobium sp. C4 TaxID=1349800 RepID=UPI001E2F5250)

HSP 1 Score: 60.5 bits (145), Expect = 1.750e-8
Identity = 32/98 (32.65%), Postives = 49/98 (50.00%), Query Frame = 0 
Query:   11 NVPPNQRSESEIMTADIGLMLPLAEGLTMRTGLTLNHTVSQTVLPGGVPALDNNWLAGSVGLTYKINKSFEVNAGYSGWLNSNKNEYSRASVGLGYRF 108
            N P      S +    +G+     + L + + +  NH + QTV  G  P L  NW    VG+ Y I  ++EVNA    W+ ++   Y+RASVG+ Y+F
Sbjct:  213 NTPARAAWGSTLALVQLGVSYQATDQLRLSSAVVFNHFIVQTVA-GNEPKLSPNWFTLQVGVNYDITPNWEVNAKALTWVGNSSMNYTRASVGVAYKF 309
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20796.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
UPI001E2F52501.750e-832.65porin family protein n=1 Tax=Rhizobium sp. C4 TaxI... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036709Autotransporter beta-domain superfamilyGENE3D2.40.128.130coord: 5..108
e-value: 2.2E-5
score: 25.9
IPR011250Outer membrane protein/outer membrane enzyme PagP, beta-barrelSUPERFAMILY56925OMPA-likecoord: 21..108

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig20796contigP-wetherbeei_contig20796:717..1043 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig20796.1.1mRNA_P-wetherbeei_contig20796.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig20796 717..1043 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig20796.1.1 ID=prot_P-wetherbeei_contig20796.1.1|Name=mRNA_P-wetherbeei_contig20796.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=109bp
KSNQDFSFANNVPPNQRSESEIMTADIGLMLPLAEGLTMRTGLTLNHTVS
QTVLPGGVPALDNNWLAGSVGLTYKINKSFEVNAGYSGWLNSNKNEYSRA
SVGLGYRF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036709Autotransporte_beta_dom_sf
IPR011250OMP/PagP_b-brl