prot_P-wetherbeei_contig20311.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig20311.1.1
Unique Nameprot_P-wetherbeei_contig20311.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length67
Homology
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BLAST of mRNA_P-wetherbeei_contig20311.1.1 vs. uniprot
Match: A0A7X9AGP3_9BURK (Type II secretion system protein n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7X9AGP3_9BURK)

HSP 1 Score: 60.8 bits (146), Expect = 7.440e-10
Identity = 34/66 (51.52%), Postives = 47/66 (71.21%), Query Frame = 0 
Query:    1 MVRRRGTTLVETLVVVFLFSLLTTVILGFYMFANRASQNHEQLSENYRKMLTVLDRLETLMQGSKI 66
            M R  GTTL ETLVV+ +FS L  +ILGFY+  +R +   EQ S +YR++L VLDR+ETL+  S++
Sbjct:    1 MKRSPGTTLTETLVVMAVFSTLMILILGFYIEGSRVTARQEQSSGSYRRVLQVLDRVETLLAFSRV 66
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20311.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7X9AGP3_9BURK7.440e-1051.52Type II secretion system protein n=1 Tax=Burkholde... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 40..60

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig20311contigP-wetherbeei_contig20311:194..394 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig20311.1.1mRNA_P-wetherbeei_contig20311.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig20311 194..394 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig20311.1.1 ID=prot_P-wetherbeei_contig20311.1.1|Name=mRNA_P-wetherbeei_contig20311.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=67bp
MVRRRGTTLVETLVVVFLFSLLTTVILGFYMFANRASQNHEQLSENYRKM
LTVLDRLETLMQGSKIL
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