mRNA_P-wetherbeei_contig20093.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig20093.1.1 vs. uniprot
Match: A0A847ZSL4_9HYPH (DeoR/GlpR transcriptional regulator n=1 Tax=Phyllobacteriaceae bacterium TaxID=1871068 RepID=A0A847ZSL4_9HYPH) HSP 1 Score: 333 bits (853), Expect = 2.770e-112 Identity = 163/258 (63.18%), Postives = 208/258 (80.62%), Query Frame = 1
Query: 1 MHERERWQMILGAIKDRAVVTVRELIARTGASPATLRRDLAKLEEAGQIKRVHGGVEALNFDDRPHLETRAFEASQSMRASAKRAISRAAAGLCQDNDSIIINAGTTTFQMVDFLRDRKMQIITNSFPIAEALVAQSENRIIMPGGEIYREQGIVLSPFDGDASQHYTASKMFMSCFSFGPLGVIEGDALIARAEAKLLGRADKLIVLADSSKFETRGSMAVCPLSRVHTLITDDEAPEAVLDQVRQAGVNVIVVSAE 774
MHERERWQ+IL +++R V+ +REL+ T ASPATLRRD+ KLEE GQ++RVHGG+E + + +L TRAF SQ++ A+ KRA++RAAA +CQD +SIIINAG+TT+ M ++LR+ ++QI+TNSFPIA+ L+ NRI++PGGEIYREQGI+LSPFD DA QH+TASKMFMSC++ +G+IEGD LIARAEAKLL RA+ L+VLADSSKFE RGSMAVC SRVHTLITD+ AP A+LD +R GV VI+ E
Sbjct: 1 MHERERWQLILKQVRERGVIRLRELVTLTHASPATLRRDVTKLEEMGQLRRVHGGIEVIEAAQQTNLATRAFGVSQTINATRKRALARAAAAMCQDGESIIINAGSTTWFMAEYLRESRLQILTNSFPIAQELIVTGNNRIVVPGGEIYREQGIILSPFDEDAIQHFTASKMFMSCYAITQMGIIEGDPLIARAEAKLLSRAEHLVVLADSSKFEPRGSMAVCQFSRVHTLITDNGAPAALLDHIRSRGVQVIIAEDE 258
BLAST of mRNA_P-wetherbeei_contig20093.1.1 vs. uniprot
Match: UPI001BC2C7F6 (DeoR/GlpR transcriptional regulator n=5 Tax=Rhodobacteraceae TaxID=31989 RepID=UPI001BC2C7F6) HSP 1 Score: 315 bits (808), Expect = 2.590e-105 Identity = 159/266 (59.77%), Postives = 205/266 (77.07%), Query Frame = 1
Query: 1 MHERERWQMILGAIKDRAVVTVRELIARTGASPATLRRDLAKLEEAGQIKRVHGGVEALNFDDRPHLETRAFEASQSMRASAKRAISRAAAGLCQDNDSIIINAGTTTFQMVDFLRDRKMQIITNSFPIAEALVAQSENRIIMPGGEIYREQGIVLSPFDGDASQHYTASKMFMSCFSFGPLGVIEGDALIARAEAKLLGRADKLIVLADSSKFETRGSMAVCPLSRVHTLITDDEAPEAVLDQVRQAGVNVIVVSAERADVSFAA 798
MHERERWQ+IL ++DR +V V +L+ TGAS ATLRRDLAKLE+ GQ++RVHGG E++ P L +F+ASQ++ A K+A+++ AA LCQD DSII+NAG+TT+ M LR +MQ++TNSFPIA+ L+A S NR+++PGGE+YRE GI+LSPFD DA QH+ ASKMFMSC+S PLG+IE D L+ARAEAKLL R + LIV+ADSSKFE RG+M VCPL+RV TL+TD AP +LD +RQ GV VI++ + A V AA
Sbjct: 11 MHERERWQLILTRLRDRGIVRVADLVGVTGASVATLRRDLAKLEDTGQLRRVHGGAESVASGQTP-LTAPSFDASQTLNADLKQAVAQGAANLCQDGDSIILNAGSTTWFMAQCLRGHRMQVLTNSFPIAQELIAHSMNRVVLPGGELYREAGIILSPFDEDAIQHFAASKMFMSCYSITPLGIIESDPLVARAEAKLLTRTENLIVVADSSKFEARGNMVVCPLTRVSTLVTDTGAPPHMLDHLRQLGVEVILIDPKAAKVLTAA 275
BLAST of mRNA_P-wetherbeei_contig20093.1.1 vs. uniprot
Match: UPI001D083148 (DeoR/GlpR family DNA-binding transcription regulator n=1 Tax=Rhodobacter sp. Har01 TaxID=2883999 RepID=UPI001D083148) HSP 1 Score: 308 bits (789), Expect = 1.470e-102 Identity = 152/266 (57.14%), Postives = 200/266 (75.19%), Query Frame = 1
Query: 1 MHERERWQMILGAIKDRAVVTVRELIARTGASPATLRRDLAKLEEAGQIKRVHGGVEALNFDDRPHLETRAFEASQSMRASAKRAISRAAAGLCQDNDSIIINAGTTTFQMVDFLRDRKMQIITNSFPIAEALVAQSENRIIMPGGEIYREQGIVLSPFDGDASQHYTASKMFMSCFSFGPLGVIEGDALIARAEAKLLGRADKLIVLADSSKFETRGSMAVCPLSRVHTLITDDEAPEAVLDQVRQAGVNVIVVSAERADVSFAA 798
MHERERW +IL +++R +V + +L A TGAS ATLRRDLAKLE++GQ++RVHGG E + L +F ASQ+ A+ KRA++ AAGLC+D DSII+NAG+TT+ + LR +MQ++TNSFPIA+ L+A S NR+++PGGE+YRE GI+LSPFD DA QH+ ASKMFMSC++ PLGVIE D LIARAEAKLL R ++LIV+ADSSKFE RG+M VCPLSRV T++TD AP +++ +R GV V++ + V AA
Sbjct: 1 MHERERWHLILNRLRERGIVRIGDLAALTGASVATLRRDLAKLEDSGQLRRVHGGAEGAGVSGQNELTATSFGASQTQHATEKRAVAALAAGLCEDGDSIILNAGSTTWFLAQCLRGHRMQVLTNSFPIAQELIAHSANRVVLPGGELYREPGIILSPFDEDAIQHFAASKMFMSCYAITPLGVIESDPLIARAEAKLLTRTERLIVVADSSKFEARGNMVVCPLSRVSTVVTDTGAPPQMVEHLRSVGVEVLIADPQERKVLTAA 266
BLAST of mRNA_P-wetherbeei_contig20093.1.1 vs. uniprot
Match: A0A317I2H3_9PROT (DeoR family transcriptional regulator n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A317I2H3_9PROT) HSP 1 Score: 305 bits (780), Expect = 3.910e-101 Identity = 150/263 (57.03%), Postives = 203/263 (77.19%), Query Frame = 1
Query: 1 MHERERWQMILGAIKDRAVVTVRELIARTGASPATLRRDLAKLEEAGQIKRVHGGVEALNFD-----DRPHLETRAFEASQSMRASAKRAISRAAAGLCQDNDSIIINAGTTTFQMVDFLRDRKMQIITNSFPIAEALVAQSENRIIMPGGEIYREQGIVLSPFDGDASQHYTASKMFMSCFSFGPLGVIEGDALIARAEAKLLGRADKLIVLADSSKFETRGSMAVCPLSRVHTLITDDEAPEAVLDQVRQAGVNVIVVSAE 774
MHERERWQ+I +++R++V + + TGAS AT+RRD A L E G RVHGG+EAL+ D P L TR+F+ SQ++ AKRAI+++A LC D ++IIIN GTTT+QM ++LR+R+++++TNS+P+AE L+ S+ R+ +PGGE+YREQG+++SPFD DA QHY+A++MFMS S GPLGVIEGD L+ARAE+KLL RADKLIVLADSSKF +RGS+ VCPLSR+HTL+TD AP LD +R GV+++VV A+
Sbjct: 1 MHERERWQVIKALLRERSLVRIADACRATGASEATVRRDFASLAEQGVAVRVHGGLEALHDTANARGDVPSLATRSFDVSQTLNIDAKRAIAKSAVALCIDGETIIINGGTTTYQMGEYLRERRLKVLTNSYPLAEILIHHSKCRVALPGGEVYREQGMIVSPFDEDAIQHYSATRMFMSAISIGPLGVIEGDPLLARAESKLLKRADKLIVLADSSKFVSRGSLVVCPLSRIHTLVTDSGAPRPALDMLRDNGVHIVVVDAD 263
BLAST of mRNA_P-wetherbeei_contig20093.1.1 vs. uniprot
Match: V7EQY4_9RHOB (DeoR faimly transcriptional regulator n=1 Tax=Rhodobacter sp. CACIA14H1 TaxID=1408890 RepID=V7EQY4_9RHOB) HSP 1 Score: 303 bits (777), Expect = 9.750e-101 Identity = 154/266 (57.89%), Postives = 201/266 (75.56%), Query Frame = 1
Query: 1 MHERERWQMILGAIKDRAVVTVRELIARTGASPATLRRDLAKLEEAGQIKRVHGGVEALNFDDRPHLETRAFEASQSMRASAKRAISRAAAGLCQDNDSIIINAGTTTFQMVDFLRDRKMQIITNSFPIAEALVAQSENRIIMPGGEIYREQGIVLSPFDGDASQHYTASKMFMSCFSFGPLGVIEGDALIARAEAKLLGRADKLIVLADSSKFETRGSMAVCPLSRVHTLITDDEAPEAVLDQVRQAGVNVIVVSAERADVSFAA 798
MHERERW +IL +++R +V V +L TGAS ATLRRDLAKLE++GQ++RVHGG E + L +F ASQ++ A+ K+AI+ AAAGLC+D DSII+NAG+TT+ M LR ++MQ++TNSFPIA+ L+A S NR+++PGGE+YRE GI+LSPFD DA QH+ ASKMFMS ++ PLGVIE D LIARAEAKLL R ++LIVL DSSKFE RG++ VCPL+RV T+ITD AP+ ++D +R GV VI+ + V AA
Sbjct: 1 MHERERWTLILTKLRERGIVRVSDLALWTGASVATLRRDLAKLEDSGQLRRVHGGAEQAEVSGQNELTATSFGASQTIHATEKQAIAAAAAGLCEDGDSIILNAGSTTWFMAQCLRAKRMQVLTNSFPIAQELIANSANRVVLPGGELYREPGIILSPFDEDAIQHFAASKMFMSAYAITPLGVIESDPLIARAEAKLLSRTERLIVLVDSSKFEARGNIVVCPLTRVSTVITDTGAPQHMVDHLRGVGVEVILTDPKDVKVPAAA 266
BLAST of mRNA_P-wetherbeei_contig20093.1.1 vs. uniprot
Match: A0A2S9QHG1_9HYPH (DeoR family transcriptional regulator n=4 Tax=Labrys TaxID=204476 RepID=A0A2S9QHG1_9HYPH) HSP 1 Score: 303 bits (776), Expect = 1.130e-100 Identity = 157/255 (61.57%), Postives = 193/255 (75.69%), Query Frame = 1
Query: 1 MHERERWQMILGAIKDRAVVTVRELIARTGASPATLRRDLAKLEEAGQIKRVHGGVEALNFDDRPHLETRAFEASQSMRASAKRAISRAAAGLCQDNDSIIINAGTTTFQMVDFLRDRKMQIITNSFPIAEALVAQSENRIIMPGGEIYREQGIVLSPFDGDASQHYTASKMFMSCFSFGPLGVIEGDALIARAEAKLLGRADKLIVLADSSKFETRGSMAVCPLSRVHTLITDDEAPEAVLDQVRQAGVNVIVV 765
MHE+ERWQ I+ +++R+V++ REL A T ASPAT+RRDL L G ++R+HGGV AL + LE R F SQ++ A KRA++ AA LC+D +SIIIN G+TTF MV+FLR ++QI+TNSFPIA AL+ S+NRII+PGGEIYR+Q ++LSPFD D+ QHYTASKMFMS S GPLG+IE D LIARAEAKLL RA LIVLADSSKFE RGSMAV PLSR+ LITDD P A D + +AGV V +V
Sbjct: 1 MHEQERWQAIVRLVQERSVISARELAAVTRASPATIRRDLTHLAAQGMVRRMHGGVRALASPEGSTLEARRFGVSQALNAGRKRAVAERAAALCRDGESIIINGGSTTFHMVEFLRTSRLQILTNSFPIAAALMQDSDNRIILPGGEIYRDQSLILSPFDQDSIQHYTASKMFMSAASIGPLGLIESDPLIARAEAKLLTRAADLIVLADSSKFEPRGSMAVAPLSRIRRLITDDGIPPAARDMLAEAGVEVEIV 255
BLAST of mRNA_P-wetherbeei_contig20093.1.1 vs. uniprot
Match: UPI00131C5B89 (DeoR/GlpR family DNA-binding transcription regulator n=1 Tax=Methylocapsa sp. S129 TaxID=1641869 RepID=UPI00131C5B89) HSP 1 Score: 301 bits (771), Expect = 1.040e-99 Identity = 152/268 (56.72%), Postives = 203/268 (75.75%), Query Frame = 1
Query: 1 MHERERWQMILGAIKDRAVVTVRELIARTGASPATLRRDLAKLEEAGQIKRVHGGVEA-----LNFDDRPHLETRAFEASQSMRASAKRAISRAAAGLCQDNDSIIINAGTTTFQMVDFLRDRKMQIITNSFPIAEALVAQSENRIIMPGGEIYREQGIVLSPFDGDASQHYTASKMFMSCFSFGPLGVIEGDALIARAEAKLLGRADKLIVLADSSKFETRGSMAVCPLSRVHTLITDDEAPEAVLDQVRQAGVNVIVVSAERADVS 789
MHERERWQ+I +K+ +V + ++ TGAS A++RRD A+L E G RVHGG+EA L +D P L TR+FE S+++ +AKRAI++AA LC D D+IIIN GTTTF+M +FLR+R+++++TNS+P+AE L+ S+ R+ +PGGE+YREQ +++SPF+ DA QHY+AS+MFMS S GPLGVIEGD LIARAE KLL RADKL+VLADSSKF +RGS+ VCPLSR+ LITD+ A A LD +R+AGV V +V + A +S
Sbjct: 1 MHERERWQVIKAMLKEHTLVRIADVCRATGASEASVRRDFARLAELGSATRVHGGLEAIPGSQLASNDAPALATRSFEISKTLNVAAKRAIAKAAVALCSDGDAIIINGGTTTFEMGEFLRERRLKVLTNSYPLAETLIHDSKCRVALPGGEVYREQKLIVSPFEEDAIQHYSASRMFMSAISIGPLGVIEGDPLIARAETKLLKRADKLVVLADSSKFASRGSLVVCPLSRIDILITDNGASAAALDMLREAGVQVQLVDIDAAGLS 268
BLAST of mRNA_P-wetherbeei_contig20093.1.1 vs. uniprot
Match: A0A2M7YA25_9RHOB (DeoR family transcriptional regulator n=3 Tax=unclassified Rhodobacterales TaxID=285892 RepID=A0A2M7YA25_9RHOB) HSP 1 Score: 297 bits (760), Expect = 3.720e-98 Identity = 160/266 (60.15%), Postives = 194/266 (72.93%), Query Frame = 1
Query: 1 MHERERWQMILGAIKDRAVVTVRELIARTGASPATLRRDLAKLEEAGQIKRVHGGVEALNFDDRPHLETRAFEASQSMRASAKRAISRAAAGLCQDNDSIIINAGTTTFQMVDFLRDRKMQIITNSFPIAEALVAQSENRIIMPGGEIYREQGIVLSPFDGDASQHYTASKMFMSCFSFGPLGVIEGDALIARAEAKLLGRADKLIVLADSSKFETRGSMAVCPLSRVHTLITDDEAPEAVLDQVRQAGVNVIVVSAERADVSFAA 798
M E ER +MI + R VR+L TGASPATLRRDLAKL AG ++RVHGGVEA D RP L T F+ Q+ +AKRAI+RAAA LC D ++II+NAG+TTFQM FLR+R++QI+TNSFP+A ALV S+NR+++PGGEIYREQGIVLSPFD DA +H A +MFMS + GPLGVIEGD LIARAEAKLL RA +L+VL DS KF G++AVCPL+RV LITDD AP L +R AGV V VV+ + D + A
Sbjct: 1 MVESERVRMIAALVAARGFAAVRDLTEATGASPATLRRDLAKLAAAGAVRRVHGGVEAA--DARPRLATSPFDIGQTRAVAAKRAIARAAAALCADGETIIVNAGSTTFQMAAFLRERRLQIVTNSFPMAAALVETSDNRVLIPGGEIYREQGIVLSPFDDDALRHVAACRMFMSAVTVGPLGVIEGDPLIARAEAKLLDRAPELVVLLDSGKFARHGALAVCPLARVSRLITDDAAPPEALAMLRDAGVAVTVVAPDAEDRALGA 264
BLAST of mRNA_P-wetherbeei_contig20093.1.1 vs. uniprot
Match: H0TVP3_9BRAD (Transcriptional regulator, DeoR family n=1 Tax=Bradyrhizobium sp. STM 3843 TaxID=551947 RepID=H0TVP3_9BRAD) HSP 1 Score: 297 bits (760), Expect = 4.250e-98 Identity = 151/265 (56.98%), Postives = 197/265 (74.34%), Query Frame = 1
Query: 1 MHERERWQMILGAIKDRAVVTVRELIARTGASPATLRRDLAKLEEAGQIKRVHGGVEALNFDDRPH--------LETRAFEASQSMRASAKRAISRAAAGLCQDNDSIIINAGTTTFQMVDFLRDRKMQIITNSFPIAEALVAQSENRIIMPGGEIYREQGIVLSPFDGDASQHYTASKMFMSCFSFGPLGVIEGDALIARAEAKLLGRADKLIVLADSSKFETRGSMAVCPLSRVHTLITDDEAPEAVLDQVRQAGVNVIVVSA 771
MHERERWQ+I +++R++V + + TGAS A++RRD A L G RV GG+EAL PH L TR+F+ SQ++ AKR I++AA LC D D+IIIN GTTT+QM D+LRDR+++++TNS+P+AE L+ S+ R+ +PGGEIYREQG+++SPF+ DA QHY+A++MFMS S GPLGVIEGD L+ARAE+KLL RA+KLIVLADSSKF RGS+ VCPLSR+HTL+TD AP +D +RQ GV VIVV A
Sbjct: 1 MHERERWQVIKTLLRERSLVRIVDACRATGASEASVRRDFASLAAQGVASRVRGGLEALAA---PHPTPGDVVTLATRSFDVSQTLNIDAKRTIAKAAVALCTDGDTIIINGGTTTYQMGDYLRDRRLKVLTNSYPLAEILIHHSKCRVALPGGEIYREQGVIVSPFEEDAIQHYSATRMFMSAISIGPLGVIEGDPLLARAESKLLKRAEKLIVLADSSKFAARGSLVVCPLSRIHTLVTDSGAPHTAIDMLRQHGVEVIVVDA 262
BLAST of mRNA_P-wetherbeei_contig20093.1.1 vs. uniprot
Match: UPI001FEFC3B0 (DeoR/GlpR family DNA-binding transcription regulator n=1 Tax=Aestuariivirga litoralis TaxID=2650924 RepID=UPI001FEFC3B0) HSP 1 Score: 296 bits (758), Expect = 6.110e-98 Identity = 147/244 (60.25%), Postives = 185/244 (75.82%), Query Frame = 1
Query: 31 LGAIKDRAVVTVRELIARTGASPATLRRDLAKLEEAGQIKRVHGGVEALNFDDRPHLETRAFEASQSMRASAKRAISRAAAGLCQDNDSIIINAGTTTFQMVDFLRDRKMQIITNSFPIAEALVAQSENRIIMPGGEIYREQGIVLSPFDGDASQHYTASKMFMSCFSFGPLGVIEGDALIARAEAKLLGRADKLIVLADSSKFETRGSMAVCPLSRVHTLITDDEAPEAVLDQVRQAGVNVIV 762
+ ++ R V+ VR+L+ TGAS AT+RRDL KL E GQI R+HGG+E ++PHL TRAF SQ + + KRA++ AAA LC D +SII+NAG+T + M +FLR +++QI+TNSFPIA+ L+A S NRII+ GGE+YREQGI+LSPFD DA Q +TASKMFMSC S +GVIEGD L+ R+E KLL RADKLIV+ADSSKFE RGSM VC SRVHTLITD+ AP +L +R GV VI+
Sbjct: 1 MAQVRQRGVIRVRDLVNATGASSATIRRDLTKLMEMGQINRIHGGIEMREMPEQPHLATRAFGVSQGLNVAKKRAVAAAAAQLCNDGESIILNAGSTMWYMAEFLRQKQLQILTNSFPIAQELIATSNNRIILAGGEVYREQGIILSPFDEDAIQQFTASKMFMSCSSITSMGVIEGDPLVTRSETKLLSRADKLIVVADSSKFEPRGSMVVCKFSRVHTLITDEGAPAELLKHIRDQGVEVII 244 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20093.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig20093.1.1 >prot_P-wetherbeei_contig20093.1.1 ID=prot_P-wetherbeei_contig20093.1.1|Name=mRNA_P-wetherbeei_contig20093.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=267bp MHERERWQMILGAIKDRAVVTVRELIARTGASPATLRRDLAKLEEAGQIKback to top mRNA from alignment at P-wetherbeei_contig20093:26..826- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig20093.1.1 ID=mRNA_P-wetherbeei_contig20093.1.1|Name=mRNA_P-wetherbeei_contig20093.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=801bp|location=Sequence derived from alignment at P-wetherbeei_contig20093:26..826- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig20093:26..826- >mRNA_P-wetherbeei_contig20093.1.1 ID=mRNA_P-wetherbeei_contig20093.1.1|Name=mRNA_P-wetherbeei_contig20093.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=801bp|location=Sequence derived from alignment at P-wetherbeei_contig20093:26..826- (Phaeothamnion wetherbeei SAG_119_79)back to top |