mRNA_P-wetherbeei_contig2004.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig2004.4.1 vs. uniprot
Match: A0A836C9Q5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9Q5_9STRA) HSP 1 Score: 141 bits (355), Expect = 1.730e-38 Identity = 71/130 (54.62%), Postives = 97/130 (74.62%), Query Frame = 1
Query: 244 PVSAAVGEGDLPDGARQFLNVLNAQRDWVALGKTVAERKGELSESEWKNVQLFLRKFYQACDDMAFMAKGLAAPLKKEALSLIDAMKKEVKAADKPAAARDDDGFLAAQSSVASKLDIFLQLFNDVPDEL 633
P AAVGEG+LPD A FL ++ Q+DW A+GKTV ER+ +++ EW+NVQL+LRK YQ +++ MAKG A P + +AL+L++A++ E +AADKPA ARD D FLAAQ S+ +K+ F+ LF DVPDEL
Sbjct: 7 PAFAAVGEGNLPDEAYAFLKLIQLQKDWAAIGKTVRERE-DVAGDEWQNVQLYLRKMYQQGEELKGMAKGFAEPKRAQALALVEAVRAEARAADKPAGARDRDAFLAAQRSIEAKIGEFVDLFQDVPDEL 135
BLAST of mRNA_P-wetherbeei_contig2004.4.1 vs. uniprot
Match: D8LPW5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPW5_ECTSI) HSP 1 Score: 126 bits (316), Expect = 2.410e-31 Identity = 62/125 (49.60%), Postives = 87/125 (69.60%), Query Frame = 1
Query: 259 VGEGDLPDGARQFLNVLNAQRDWVALGKTVAERKGELSESEWKNVQLFLRKFYQACDDMAFMAKGLAAPLKKEALSLIDAMKKEVKAADKPAAARDDDGFLAAQSSVASKLDIFLQLFNDVPDEL 633
VGEG LPDGARQF N++ Q+DW ALGK++ + +++ EWKNV LFLRK YQ ++ ++A KK AL+L+ +++KEV+AAD PA +D F+ AQ+SV K + F++LFNDVP EL
Sbjct: 121 VGEGGLPDGARQFSNLVKVQKDWAALGKSIERQGADVTADEWKNVALFLRKVYQLGGELEYLAGTFPPDKKKSALALVRSIQKEVQAADVPAREKDAAAFMKAQASVQKKFEDFMELFNDVPSEL 245
BLAST of mRNA_P-wetherbeei_contig2004.4.1 vs. uniprot
Match: A0A7S2SX15_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SX15_9STRA) HSP 1 Score: 122 bits (305), Expect = 1.590e-30 Identity = 75/159 (47.17%), Postives = 103/159 (64.78%), Query Frame = 1
Query: 163 EMETSRQELLQRTALFVSTVGAAAIPKPVSAA--VGEGDLPDGARQFLNVLNAQRDWVALGKTVAERKGELSESEWKNVQLFLRKFYQACDDMAFMAKGLAAPLKKEALSLIDAMKKEVKAADKPAAARDDDGFLAAQSSVASKLDIFLQLFNDVPDEL 633
E SR+ LLQ A + S A A P VSAA VGEG LP+GARQF NVL + +W +GKTV + + ELS ++W+N+Q FLR+ YQ +DM F+AKG++ + A ++A++K ++ ADKPA D FL AQ VA ++ FL+L +DVPDEL
Sbjct: 19 EPSLSRRSLLQLPA-WASAGLALAGPARVSAAAPVGEGGLPEGARQFDNVLRMRVEWDVMGKTVQDSE-ELSAAQWRNIQGFLRRAYQVGNDMKFVAKGVSKDKQAAAFKAVEAIQKSIEGADKPAQQNDRAAFLVAQKDVARQIADFLELISDVPDEL 175
BLAST of mRNA_P-wetherbeei_contig2004.4.1 vs. uniprot
Match: A0A7S2H2F6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H2F6_9STRA) HSP 1 Score: 120 bits (302), Expect = 1.300e-29 Identity = 65/141 (46.10%), Postives = 90/141 (63.83%), Query Frame = 1
Query: 217 TVGAAAIPKPVSAAVGEGDLPDGARQFLNVLNAQRDWVALGKTVAERKGELSESEWKNVQLFLRKFYQACDDMAFMAKGLAAPLKKEALSLIDAMKKEVKAADKPAAARDDDGFLAAQSSVASKLDIFLQLFND--VPDEL 633
TV +A+ KPV GEG LPDGARQF N++ AQRDW+ LGK V R E ++ EWKNV +LRK Y DDM F+++ + A K +A +L+ + K++VK A KP +D + F+A + +S+L FL L + VPDEL
Sbjct: 79 TVATSAMAKPV----GEGGLPDGARQFDNLVRAQRDWIKLGKAVESRHEEFTDEEWKNVGFYLRKLYSVGDDMTFLSQNMEAAKKTDAAALVKSFKQKVKDAAKPVETKDWEAFVAVEKETSSQLSTFLGLLSSGSVPDEL 215
BLAST of mRNA_P-wetherbeei_contig2004.4.1 vs. uniprot
Match: A0A7S1XVU1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XVU1_9STRA) HSP 1 Score: 118 bits (295), Expect = 1.580e-29 Identity = 63/135 (46.67%), Postives = 82/135 (60.74%), Query Frame = 1
Query: 229 AAIPKPVSAAVGEGDLPDGARQFLNVLNAQRDWVALGKTVAERKGELSESEWKNVQLFLRKFYQACDDMAFMAKGLAAPLKKEALSLIDAMKKEVKAADKPAAARDDDGFLAAQSSVASKLDIFLQLFNDVPDEL 633
AA P P AAVGEGDLP+GARQF NVL AQ+ W LGK V +R + + EW NVQ LR YQ DDM +AKG +K+ +L+ M+ +++ AD+PA +D FL A + + F L +DVPDEL
Sbjct: 4 AAAPAPTLAAVGEGDLPEGARQFQNVLKAQKTWAELGKAVKDRGSQFDDKEWVNVQTLLRSVYQVGDDMKAVAKGNGN--EKQLFALVKEMQGKIQGADEPAKQKDAAAFLVAVTDIGKSFTSFFDLLSDVPDEL 136
BLAST of mRNA_P-wetherbeei_contig2004.4.1 vs. uniprot
Match: A0A7S2H2F4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H2F4_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 1.600e-18 Identity = 44/85 (51.76%), Postives = 56/85 (65.88%), Query Frame = 1
Query: 217 TVGAAAIPKPVSAAVGEGDLPDGARQFLNVLNAQRDWVALGKTVAERKGELSESEWKNVQLFLRKFYQACDDMAFMAKGLAAPLK 471
TV +A+ KPV GEG LPDGARQF N++ AQRDW+ LGK V R E ++ EWKNV +LRK Y DDM F+++ + A K
Sbjct: 79 TVATSAMAKPV----GEGGLPDGARQFDNLVRAQRDWIKLGKAVESRHEEFTDEEWKNVGFYLRKLYSVGDDMTFLSQNMEAAKK 159
BLAST of mRNA_P-wetherbeei_contig2004.4.1 vs. uniprot
Match: L1ISU0_GUITC (Uncharacterized protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1ISU0_GUITC) HSP 1 Score: 85.9 bits (211), Expect = 2.080e-16 Identity = 51/154 (33.12%), Postives = 81/154 (52.60%), Query Frame = 1
Query: 205 LFVSTVGAAAIPKPVSAA-VGEGDLPDGARQFLNVLNAQRDWVALGKTVAERKGELSESEWKNVQLFLRKFYQACDDMAFMAKGLAAPLKKEALSLIDAMKKEVKAADKPAAARDDDGFLAAQSSVASKLDIFLQLFND----------VPDEL 633
+ ++T G A K V A V +G LP G ++++++ +++ W +G V+ E+SE EWKNVQ +LRKF+ DM +AK + +K + +K VK DKPAAA+D + F+A + +D F + + VPDEL
Sbjct: 61 IMLATAGMLAQTKDVGAKDVADGGLPGGLAEYMSIIKSKKQWGEIGNRVSNGHAEMSEEEWKNVQGYLRKFFDTGKDMEVVAKAFSPEEQKAVAEVSKEFRKAVKGIDKPAAAKDWETFMAQHKVILGYIDEFQDIRSGKKKIQSNAQYVPDEL 214
BLAST of mRNA_P-wetherbeei_contig2004.4.1 vs. uniprot
Match: A0A7S3NJV4_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NJV4_9STRA) HSP 1 Score: 84.3 bits (207), Expect = 3.250e-16 Identity = 50/149 (33.56%), Postives = 77/149 (51.68%), Query Frame = 1
Query: 187 LLQRTALFVSTVGAAAIPKPVSAAVGEGDLPDGARQFLNVLNAQRDWVALGKTVAERKGELSESEWKNVQLFLRKFYQACDDMAFMAKGLAAPLKKEALSLIDAMKKEVKAADKPAAARDDDGFLAAQSSVASKLDIFLQLFNDVPDEL 633
++ R+ + +++GA P +S A EGDLPDGA QF + Q +W G + + + EW+ V LFLRK Y +DM F+ + L + A + + VK ADKP +D + A + ++ + FL+L DVPDEL
Sbjct: 27 VVTRSQVLRASLGATLTPL-ISNARNEGDLPDGAFQFDRFIKVQSEWNRFGSRLKDESQVIDAKEWEAVGLFLRKLYDEGEDMIFITQNLDKTKQNAAKEIATRFRSSVKGADKPVREQDRPVVIYAYNETSALMRSFLELLQDVPDEL 174
BLAST of mRNA_P-wetherbeei_contig2004.4.1 vs. uniprot
Match: A0A7S2CQC3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CQC3_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 3.640e-15 Identity = 41/76 (53.95%), Postives = 52/76 (68.42%), Query Frame = 1
Query: 226 AAAIPKPVSAAVGEGDLPDGARQFLNVLNAQRDWVALGKTVAERKGELSESEWKNVQLFLRKFYQACDDMAFMAKG 453
AAA+P VGEG LPDGA+QF +++ A+R+W LGK++A R E S EWKNV LFLR+ Y DDM FMA+
Sbjct: 106 AAALP------VGEGGLPDGAKQFESLVRAKREWNKLGKSIATRHEEYSAEEWKNVALFLRQLYSTGDDMNFMARS 175
BLAST of mRNA_P-wetherbeei_contig2004.4.1 vs. uniprot
Match: A0A813F4Q6_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813F4Q6_POLGL) HSP 1 Score: 81.6 bits (200), Expect = 1.090e-14 Identity = 56/177 (31.64%), Postives = 87/177 (49.15%), Query Frame = 1
Query: 172 TSRQELLQRTALFVSTVGAAAIPKPVSAAVGEGDLPDGARQFLNVLNAQRDWV--------ALGKTVAERKGE-------LSESEWKNVQLFLRKFYQACDDMAFMAKGLAAPLKKE-ALSLIDAMKKEVKAADKPAAARDDDGFLAAQSSVASKLDIFLQLFNDVPDEL*TGVVSD 654
TSR+++L + G A P+ SA VGEGDLP GA+Q + W A+ A ++G+ + EW+N FLR+ Y DDM ++++G KKE A +LI+ KK+VK DKP A+D + FL + + ++ F L D ++L + +D
Sbjct: 56 TSRRDVLAAVLPLLGVGGLGAAPQSASAQVGEGDLPQGAKQEDRIRKGLEAWKKLPAKISDAVAAEAAAKEGDNATAATAAAAKEWENAVGFLRRLYGLNDDMTYLSRGFKPAEKKEKAETLINKFKKQVKLTDKPVKAKDYEKFLTFHTEITGYIEEFNSLLLDAEEDLSSAEATD 232 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig2004.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig2004.4.1 >prot_P-wetherbeei_contig2004.4.1 ID=prot_P-wetherbeei_contig2004.4.1|Name=mRNA_P-wetherbeei_contig2004.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=203bp MTLFSLALVALAVLHETDAFATIHPRPAAKAGQRSVFRTVSVMSTEMETSback to top mRNA from alignment at P-wetherbeei_contig2004:3912..5114- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig2004.4.1 ID=mRNA_P-wetherbeei_contig2004.4.1|Name=mRNA_P-wetherbeei_contig2004.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1203bp|location=Sequence derived from alignment at P-wetherbeei_contig2004:3912..5114- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig2004:3912..5114- >mRNA_P-wetherbeei_contig2004.4.1 ID=mRNA_P-wetherbeei_contig2004.4.1|Name=mRNA_P-wetherbeei_contig2004.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=609bp|location=Sequence derived from alignment at P-wetherbeei_contig2004:3912..5114- (Phaeothamnion wetherbeei SAG_119_79)back to top |