prot_P-wetherbeei_contig19984.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-wetherbeei_contig19984.1.1
Unique Name	prot_P-wetherbeei_contig19984.1.1
Type	polypeptide
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length	142

Homology

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BLAST of mRNA_P-wetherbeei_contig19984.1.1 vs. uniprot
Match: A0A537TN09_9PROT (Ldh family oxidoreductase (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537TN09_9PROT)

HSP 1 Score: 159 bits (402), Expect = 1.460e-47
Identity = 81/134 (60.45%), Postives = 102/134 (76.12%), Query Frame = 0

Query:    1 LGLSLPAGVALDAGGNPTTDPDAAKRGALLPFGGHKGFALGLAMQALGVLAGSGMNAAKDYGYLIIAMRPDLLLPLDDFKRELAIMLSRIKSVSRQPGVPEIRLPSEHSYRSRERALREGIVIDRIVHDRLVAM 134
            LG  LP GVAL  GG PT DP AA+RGALLPFGG+KGF L L MQALG+LAGSG +A  +YGYL +A RPDL+   D F+R++  ++ RIK+  R+PGV +IR+PSE ++ SRERAL EG+ IDR+V D LVA+
Sbjct:    8 LGELLPEGVALGPGGEPTRDPTAARRGALLPFGGYKGFGLALMMQALGLLAGSGSDAESEYGYLFVAFRPDLIASADAFERQVTQLIERIKATPRRPGVDDIRIPSERAFHSRERALHEGLEIDRVVFDALVAL 141

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BLAST of mRNA_P-wetherbeei_contig19984.1.1 vs. uniprot
Match: A0A7X1P0E2_9PROT (Ldh family oxidoreductase n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A7X1P0E2_9PROT)

HSP 1 Score: 160 bits (406), Expect = 7.560e-46
Identity = 85/139 (61.15%), Postives = 106/139 (76.26%), Query Frame = 0

Query:    2 GLSLPAGVALDAGGNPTTDPDAAKRGALLPFGGHKGFALGLAMQALGVLAGSGMNAAKDYGYLIIAMRPDLLLPLDDFKRELAIMLSRIKSVSRQPGVPEIRLPSEHSYRSRERALREGIVIDRIVHDRLVAMAREQQP 140
            G  LP GVA+DA G PT DP  AK  ALLPFGG+KGFAL L MQALGVLAGSG    K YGY ++A++PDLLLPLDDF+R+++ ML+R+K+  RQPGV EIRLP E + R R +ALREGI IDR ++D L+A+ + + P
Sbjct:  197 GAVLPEGVAIDAHGQPTRDP--AKVHALLPFGGYKGFALALTMQALGVLAGSGYGDDKTYGYFVMAIKPDLLLPLDDFRRDMSAMLARVKATPRQPGVDEIRLPGERALRERAKALREGIEIDRQIYDALLALPQGELP 333

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BLAST of mRNA_P-wetherbeei_contig19984.1.1 vs. uniprot
Match: A0A537RGW3_9PROT (Ldh family oxidoreductase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537RGW3_9PROT)

HSP 1 Score: 157 bits (396), Expect = 1.350e-44
Identity = 83/140 (59.29%), Postives = 101/140 (72.14%), Query Frame = 0

Query:    1 LGLSLPAGVALDAGGNPTTDPDAAKRGALLPFGGHKGFALGLAMQALGVLAGSGMNAAKDYGYLIIAMRPDLLLPLDDFKRELAIMLSRIKSVSRQPGVPEIRLPSEHSYRSRERALREGIVIDRIVHDRLVAMAREQQP 140
            LG  LP GVAL   G PT D   A+RGALLPFGG+KGF L L MQALG+LAG G N  +DYGYL IA +PDLL P D F+RE+  +L R+K+  RQ GV EIR+PSE ++RSRERALREG+ +DR+V+D L A+     P
Sbjct:  155 LGELLPEGVALGPDGEPTRDATLARRGALLPFGGYKGFGLALMMQALGLLAGFGPNGERDYGYLFIAFKPDLLGPADVFEREVTHLLERVKATPRQSGVNEIRIPSERAFRSRERALREGLEVDRLVYDALEALRAPSAP 294

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BLAST of mRNA_P-wetherbeei_contig19984.1.1 vs. uniprot
Match: A0A537THS9_9PROT (Ldh family oxidoreductase (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537THS9_9PROT)

HSP 1 Score: 154 bits (390), Expect = 2.480e-44
Identity = 79/134 (58.96%), Postives = 100/134 (74.63%), Query Frame = 0

Query:    1 LGLSLPAGVALDAGGNPTTDPDAAKRGALLPFGGHKGFALGLAMQALGVLAGSGMNAAKDYGYLIIAMRPDLLLPLDDFKRELAIMLSRIKSVSRQPGVPEIRLPSEHSYRSRERALREGIVIDRIVHDRLVAM 134
            LG  LP GVAL  GG PT DP AA+RGALLPFGG+KGF L L MQALG+LA S  +A  +YGYL +A RPDL+   D F+R++  ++ RIK+  R+PGV +IR+PSE ++ SRERAL EG+ IDR+V D LVA+
Sbjct:  118 LGELLPEGVALGPGGEPTRDPTAARRGALLPFGGYKGFGLALMMQALGLLASSSSDAESEYGYLFVAFRPDLIASADAFERQVTQLIERIKATPRRPGVDDIRIPSERAFHSRERALHEGLEIDRVVFDALVAL 251

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BLAST of mRNA_P-wetherbeei_contig19984.1.1 vs. uniprot
Match: A0A1H0WAA6_9BURK (Malate/lactate/ureidoglycolate dehydrogenase, LDH2 family n=1 Tax=Acidovorax cattleyae TaxID=80868 RepID=A0A1H0WAA6_9BURK)

HSP 1 Score: 157 bits (396), Expect = 4.140e-44
Identity = 82/134 (61.19%), Postives = 99/134 (73.88%), Query Frame = 0

Query:    2 GLSLPAGVALDAGGNPTTDPDAAKRGALLPFGGHKGFALGLAMQALGVLAGSGMNAAKDYGYLIIAMRPDLLLPLDDFKRELAIMLSRIKSVSRQPGVPEIRLPSEHSYRSRERALREGIVIDRIVHDRLVAMA 135
            G  LPAGVA+D+ G PTTDP  A+ GALLPFGGHKGFAL LA+QALGV AGSG NA KDYGYL++AM+PDLLLPL+ F+ +L   + RI++  RQPGV  IR+PSE +   R R    GI +DR V D L A+A
Sbjct:  203 GEPLPAGVAIDSEGRPTTDPHVARAGALLPFGGHKGFALALAVQALGVFAGSGFNADKDYGYLLLAMKPDLLLPLETFRNQLREEIERIRATPRQPGVDAIRIPSERAVELRRRHQASGIALDRTVFDALRALA 336

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BLAST of mRNA_P-wetherbeei_contig19984.1.1 vs. uniprot
Match: A0A7V8SZG9_9BACT (Ldh family oxidoreductase n=3 Tax=Bacteria TaxID=2 RepID=A0A7V8SZG9_9BACT)

HSP 1 Score: 154 bits (388), Expect = 3.540e-43
Identity = 79/138 (57.25%), Postives = 101/138 (73.19%), Query Frame = 0

Query:    1 LGLSLPAGVALDAGGNPTTDPDAAKRGALLPFGGHKGFALGLAMQALGVLAGSGMNAAKDYGYLIIAMRPDLLLPLDDFKRELAIMLSRIKSVSRQPGVPEIRLPSEHSYRSRERALREGIVIDRIVHDRLVAMAREQ 138
            LG  LP GVAL  GG PT DP AA+RGALLPFGG+KGF L L MQALG+LAGSG +A  +YG+L +A RPDL+   D F++ +  ++ RIK+  R+PGV +IR+P E ++ SRERAL EG+ IDR+V D LVA+   Q
Sbjct:  193 LGELLPEGVALGPGGEPTRDPTAARRGALLPFGGYKGFGLALMMQALGLLAGSGSDAESEYGFLFVAFRPDLIGSADTFEQRVTELIERIKATPRRPGVDDIRIPCERAFHSRERALHEGLEIDRVVFDALVALRARQ 330

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BLAST of mRNA_P-wetherbeei_contig19984.1.1 vs. uniprot
Match: A0A2V6QPV3_9BACT (Lactate dehydrogenase n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V6QPV3_9BACT)

HSP 1 Score: 151 bits (381), Expect = 2.270e-42
Identity = 81/135 (60.00%), Postives = 97/135 (71.85%), Query Frame = 0

Query:    1 LGLSLPAGVALDAGGNPTTDPDAAKRGALLPFGGHKGFALGLAMQALGVLAGSGMNAAKDYGYLIIAMRPDLLLPLDDFKRELAIMLSRIKSVSRQPGVPEIRLPSEHSYRSRERALREGIVIDRIVHDRLVAMA 135
            LG+ LP GVALDA G PTTD  AA+RGA+LPFGGHKG+AL LA  ALGVL G     A   GY+ IA +PDL +PLDD++R LA  + RIK++ RQ GV EIR+P E +YR R R  REGI IDR +HD LV +A
Sbjct:  173 LGMPLPEGVALDANGRPTTDARAARRGAILPFGGHKGYALALATHALGVLCGDQQEHA---GYIFIAFKPDLFMPLDDYRRALAGEIRRIKAIPRQDGVDEIRIPGERAYRERARLTREGIEIDRRIHDALVRLA 304

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BLAST of mRNA_P-wetherbeei_contig19984.1.1 vs. uniprot
Match: A0A208YAD5_9BURK (Uncharacterized protein n=2 Tax=Pigmentiphaga TaxID=152267 RepID=A0A208YAD5_9BURK)

HSP 1 Score: 150 bits (380), Expect = 7.800e-42
Identity = 83/135 (61.48%), Postives = 101/135 (74.81%), Query Frame = 0

Query:    2 GLSLPAGVALDAGGNPTTDPDAAKRGALLPFGGHKGFALGLAMQALGVLAGSGMNAAKDYGYLIIAMRPDLLLPLDDFKRELAIMLSRIKSVSRQPGVPEIRLPSEHSYRSRERALREGIVIDRIVHDRLVAMAR 136
            G +LP GVA+DA G PT DP  A  GA+LPFGGHKGFALGLAMQALG+LAGSG +  +  GYLIIA+RPDL++PL++++R L+  L+RIK+   QPGV  IRLPSE S + RER  R GIVIDR V   L  +AR
Sbjct:  202 GETLPEGVAIDANGEPTQDPILASMGAVLPFGGHKGFALGLAMQALGILAGSGDDNEERAGYLIIAIRPDLMVPLNEYRRTLSETLARIKATPLQPGVESIRLPSERSQQERERNQRTGIVIDRQVQVALQRLAR 336

[Close]

BLAST of mRNA_P-wetherbeei_contig19984.1.1 vs. uniprot
Match: A0A2V6YUN8_9BACT (Lactate dehydrogenase n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V6YUN8_9BACT)

HSP 1 Score: 150 bits (378), Expect = 1.210e-41
Identity = 78/141 (55.32%), Postives = 101/141 (71.63%), Query Frame = 0

Query:    1 LGLSLPAGVALDAGGNPTTDPDAAKRGALLPFGGHKGFALGLAMQALGVLAGSGMNAAKDYGYLIIAMRPDLLLPLDDFKRELAIMLSRIKSVSRQPGVPEIRLPSEHSYRSRERALREGIVIDRIVHDRLVAMAREQQPN 141
            LG+ LP  VA+D  G PTTD  AA+RGALLPFGGHKG+AL LAM ALGVL   G+   +  GYL IA +PDL +PL D++R LA  ++ IK++ RQ GV EIR+P E +YR R R  REGIV+DR +HD L+A+A  ++ +
Sbjct:  196 LGIPLPEDVAIDERGRPTTDAAAARRGALLPFGGHKGYALALAMHALGVLC-RGVATEESTGYLFIAFKPDLFVPLQDYRRALAAEIAAIKAIPRQEGVAEIRIPGERAYRERARLAREGIVVDRRIHDALIALAARKRQD 335

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BLAST of mRNA_P-wetherbeei_contig19984.1.1 vs. uniprot
Match: A0A2V6XS20_9BACT (Lactate dehydrogenase n=2 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V6XS20_9BACT)

HSP 1 Score: 148 bits (374), Expect = 1.140e-40
Identity = 77/135 (57.04%), Postives = 98/135 (72.59%), Query Frame = 0

Query:    1 LGLSLPAGVALDAGGNPTTDPDAAKRGALLPFGGHKGFALGLAMQALGVLAGSGMNAAKDYGYLIIAMRPDLLLPLDDFKRELAIMLSRIKSVSRQPGVPEIRLPSEHSYRSRERALREGIVIDRIVHDRLVAMA 135
            LG+ LP GVA+D  G PTTD  AA+RGALLPFGGHKG+AL LAM ALGVL  SG    +  GYL IA +PDL +PL+D++R LA  ++ IK+  RQ GV EIR+P E +YR R R  R+G+ ID+ +HD L+A+A
Sbjct:  228 LGIPLPEGVAIDEDGRPTTDATAARRGALLPFGGHKGYALALAMHALGVLC-SGTTDTESAGYLFIAFKPDLFMPLEDYRRALAAEIALIKATPRQDGVDEIRIPGERAYRDRARLTRDGLEIDQRIHDALIALA 361

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig19984.1.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig19984.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A537TN09_9PROT	1.460e-47	60.45	Ldh family oxidoreductase (Fragment) n=1 Tax=Alpha...	[more]
A0A7X1P0E2_9PROT	7.560e-46	61.15	Ldh family oxidoreductase n=1 Tax=Betaproteobacter...	[more]
A0A537RGW3_9PROT	1.350e-44	59.29	Ldh family oxidoreductase n=1 Tax=Alphaproteobacte...	[more]
A0A537THS9_9PROT	2.480e-44	58.96	Ldh family oxidoreductase (Fragment) n=1 Tax=Alpha...	[more]
A0A1H0WAA6_9BURK	4.140e-44	61.19	Malate/lactate/ureidoglycolate dehydrogenase, LDH2...	[more]
A0A7V8SZG9_9BACT	3.540e-43	57.25	Ldh family oxidoreductase n=3 Tax=Bacteria TaxID=2...	[more]
A0A2V6QPV3_9BACT	2.270e-42	60.00	Lactate dehydrogenase n=1 Tax=Candidatus Rokubacte...	[more]
A0A208YAD5_9BURK	7.800e-42	61.48	Uncharacterized protein n=2 Tax=Pigmentiphaga TaxI...	[more]
A0A2V6YUN8_9BACT	1.210e-41	55.32	Lactate dehydrogenase n=1 Tax=Candidatus Rokubacte...	[more]
A0A2V6XS20_9BACT	1.140e-40	57.04	Lactate dehydrogenase n=2 Tax=Candidatus Rokubacte...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003767	Malate/L-lactate dehydrogenase-like	PFAM	PF02615	Ldh_2	coord: 2..131 e-value: 2.4E-31 score: 109.1
IPR003767	Malate/L-lactate dehydrogenase-like	PANTHER	PTHR11091	OXIDOREDUCTASE-RELATED	coord: 4..137
IPR043144	Malate/L-sulfolactate/L-lactate dehydrogenase-like, alpha-helical domain	GENE3D	1.10.1530.10		coord: 106..137 e-value: 1.5E-33 score: 118.3
IPR043143	Malate/L-sulfolactate/L-lactate dehydrogenase-like, NADPH binding domain	GENE3D	3.30.1370.60	Hypothetical oxidoreductase yiak; domain 2	coord: 2..105 e-value: 1.5E-33 score: 118.3
IPR036111	Malate/L-sulfolactate/L-lactate dehydrogenase-like superfamily	SUPERFAMILY	89733	L-sulfolactate dehydrogenase-like	coord: 2..137

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig19984	contig	P-wetherbeei_contig19984:9..434 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig19984.1.1	mRNA_P-wetherbeei_contig19984.1.1	Phaeothamnion wetherbeei SAG_119_79	mRNA	P-wetherbeei_contig19984 9..434 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-wetherbeei_contig19984.1.1 ID=prot_P-wetherbeei_contig19984.1.1|Name=mRNA_P-wetherbeei_contig19984.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=142bp
LGLSLPAGVALDAGGNPTTDPDAAKRGALLPFGGHKGFALGLAMQALGVL
AGSGMNAAKDYGYLIIAMRPDLLLPLDDFKRELAIMLSRIKSVSRQPGVP
EIRLPSEHSYRSRERALREGIVIDRIVHDRLVAMAREQQPN*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR003767	Malate/L-lactate_DH-like
IPR043144	Mal/L-sulf/L-lact_DH-like_ah
IPR043143	Mal/L-sulf/L-lact_DH-like_NADP
IPR036111	Mal/L-sulfo/L-lacto_DH-like_sf