mRNA_P-wetherbeei_contig19980.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig19980.1.1
Unique NamemRNA_P-wetherbeei_contig19980.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig19980.1.1 vs. uniprot
Match: A0A1N6YCD6_9RHOO (Predicted arabinose efflux permease, MFS family n=8 Tax=Rhodocyclales TaxID=206389 RepID=A0A1N6YCD6_9RHOO)

HSP 1 Score: 300 bits (769), Expect = 4.130e-97
Identity = 149/253 (58.89%), Postives = 189/253 (74.70%), Query Frame = 1
Query:    7 ASREKQVAAAVLGNALEWYDFVVFGMLSVIIADLFFPGDDPYIRLLKTTATFGVGFVMRPIGGVVMGIYADKMGRKAAMQIIIALMTVSLLSIALAPTYSTIGYAAPAIIVFARLLQGFATGGQYAIATSFLVEVAPPGRRGLYGSMTQIGQALAALGGACAGMFLSVMLTPEQTAAWGWRLPFAIGLLIAPVGVYIARHLEESDAFLDHQKTAGKRLPLLTMLHENLRGVMVTFGLVICGTITYYVVLIYMP 765
            A R +Q+ AAV+GNALEWYDF+VFG L+V+I+ LFFP D  Y  LL  TATFGVGF MRP+GGV++GIYAD+ GRKAA+Q+IIA+MTVS+  IA AP Y+ IG AAP +IV ARLLQGFATGG++A ATSFL+E APP +RGLYGS    GQ LA   GA     ++  L+PE   AWGWR+PF IGLLI PVG++I RHLEE++AFL+  K   ++  +  ML  +LR V    G+ +CGT+ +YV+L+YMP
Sbjct:    7 APRARQIVAAVIGNALEWYDFIVFGFLAVVISRLFFPADSEYSSLLMATATFGVGFFMRPVGGVLLGIYADRKGRKAALQLIIAMMTVSIALIAFAPPYAAIGLAAPLLIVLARLLQGFATGGEFASATSFLIESAPPNKRGLYGSWQMFGQGLAVFAGAGVTALITRNLSPEALDAWGWRIPFMIGLLIGPVGLWIRRHLEETEAFLEAHKAPAEKQSIARMLRNHLREVFAVMGVTVCGTVGFYVILVYMP 259          
BLAST of mRNA_P-wetherbeei_contig19980.1.1 vs. uniprot
Match: H0Q4I4_9RHOO (Major facilitator superfamily MFS_1 n=1 Tax=Azoarcus sp. KH32C TaxID=748247 RepID=H0Q4I4_9RHOO)

HSP 1 Score: 295 bits (755), Expect = 5.180e-95
Identity = 147/253 (58.10%), Postives = 188/253 (74.31%), Query Frame = 1
Query:    7 ASREKQVAAAVLGNALEWYDFVVFGMLSVIIADLFFPGDDPYIRLLKTTATFGVGFVMRPIGGVVMGIYADKMGRKAAMQIIIALMTVSLLSIALAPTYSTIGYAAPAIIVFARLLQGFATGGQYAIATSFLVEVAPPGRRGLYGSMTQIGQALAALGGACAGMFLSVMLTPEQTAAWGWRLPFAIGLLIAPVGVYIARHLEESDAFLDHQKTAGKRLPLLTMLHENLRGVMVTFGLVICGTITYYVVLIYMP 765
            A R  Q+ AAV+GNALEWYDF+VFG L+V+I+ LFFP D  Y  LL  TATFGVGF MRP+GG+++GIYAD+ GRKAA+Q+II +MTV++  IA AP Y+ IG AAP +IV ARLLQGFATGG++A ATSFL+E APP RRGLYGS    GQ LA   GA     ++  L+PE   AWGWR+PF IGLLI PVG++I RHLEE++AFL+ ++   ++  L  ML  +LR V    G+ +CGT+ +YV+L+YMP
Sbjct:    7 APRTMQIVAAVIGNALEWYDFIVFGFLAVVISRLFFPADSEYSSLLMATATFGVGFFMRPVGGILLGIYADRKGRKAALQLIIGMMTVAIALIAFAPPYAAIGVAAPLLIVLARLLQGFATGGEFASATSFLIESAPPNRRGLYGSWQMFGQGLAVFCGASVTALVTRNLSPEALDAWGWRIPFMIGLLIGPVGLWIRRHLEETEAFLEARQAPAEKQSLGRMLRNHLREVFAVMGVTVCGTVGFYVILVYMP 259          
BLAST of mRNA_P-wetherbeei_contig19980.1.1 vs. uniprot
Match: A0A010RPI2_PSEFL (Membrane protein n=1 Tax=Pseudomonas fluorescens HK44 TaxID=1042209 RepID=A0A010RPI2_PSEFL)

HSP 1 Score: 295 bits (754), Expect = 7.540e-95
Identity = 145/253 (57.31%), Postives = 192/253 (75.89%), Query Frame = 1
Query:    7 ASREKQVAAAVLGNALEWYDFVVFGMLSVIIADLFFPGDDPYIRLLKTTATFGVGFVMRPIGGVVMGIYADKMGRKAAMQIIIALMTVSLLSIALAPTYSTIGYAAPAIIVFARLLQGFATGGQYAIATSFLVEVAPPGRRGLYGSMTQIGQALAALGGACAGMFLSVMLTPEQTAAWGWRLPFAIGLLIAPVGVYIARHLEESDAFLDHQKTAGKRLPLLTMLHENLRGVMVTFGLVICGTITYYVVLIYMP 765
            A  ++Q+ AAV+GNALEWYDF+VFG L+V+I+ LFFP +  Y  LL TTATFGVGF MRP+GGV++GIYAD+ GRKAA+Q+II +MTV++  IA AP Y+ IG AAP +IVFARLLQGFATGG++A ATSFL+E APP RRGLYGS    GQ LA   GA     ++  L+PE   AWGWR+PF IGL+I PVG++I RHL E++AFL+ ++   ++  L+ ML  ++R V+    L +CGT+++YV+L+YMP
Sbjct:    7 APPKRQIVAAVIGNALEWYDFIVFGFLAVVISRLFFPAESEYSSLLMTTATFGVGFFMRPVGGVLLGIYADRRGRKAALQLIIGMMTVAIALIAFAPPYAAIGVAAPLLIVFARLLQGFATGGEFASATSFLIESAPPNRRGLYGSWQMFGQGLAVFCGAAITALVTRGLSPEALDAWGWRIPFIIGLIIGPVGLWIRRHLSETNAFLEARQAPKEKQSLVRMLRNHMREVITVMALTVCGTVSFYVILVYMP 259          
BLAST of mRNA_P-wetherbeei_contig19980.1.1 vs. uniprot
Match: A0A1N6I8L1_9BURK (Predicted arabinose efflux permease, MFS family n=3 Tax=Burkholderiaceae TaxID=119060 RepID=A0A1N6I8L1_9BURK)

HSP 1 Score: 294 bits (752), Expect = 1.030e-94
Identity = 146/249 (58.63%), Postives = 191/249 (76.71%), Query Frame = 1
Query:   19 KQVAAAVLGNALEWYDFVVFGMLSVIIADLFFPGDDPYIRLLKTTATFGVGFVMRPIGGVVMGIYADKMGRKAAMQIIIALMTVSLLSIALAPTYSTIGYAAPAIIVFARLLQGFATGGQYAIATSFLVEVAPPGRRGLYGSMTQIGQALAALGGACAGMFLSVMLTPEQTAAWGWRLPFAIGLLIAPVGVYIARHLEESDAFLDHQKTAGKRLPLLTMLHENLRGVMVTFGLVICGTITYYVVLIYMP 765
            +QV AA++GNALEWYDF+V+G L+++I+ LFFP D  Y  LL TTATFGVGF MRP+GG+++G+YAD+ GRKAA+Q+II LMTVS+  IA  PTY+ IG  AP IIV AR+LQGFATGG++A +T+FLVE AP  RRGLYGS    GQALA LGGA  G  ++  L+PE   AWGWR+PF  GL+I PVG++I RHLEE++AF++ QK    +  L ++  E+ RGV+V+  L IC T+++YVVL+YMP
Sbjct:   15 RQVIAAIIGNALEWYDFIVYGFLTIVISKLFFPTDSEYGSLLLTTATFGVGFFMRPVGGILIGMYADRKGRKAALQLIIGLMTVSIAMIAFTPTYAAIGIGAPLIIVLARMLQGFATGGEFASSTAFLVESAPADRRGLYGSWQMFGQALAVLGGALVGALVTKGLSPEAVEAWGWRIPFLGGLVIGPVGLWIRRHLEETEAFIEAQKDTKSQQTLGSVFREHRRGVLVSMCLTICATVSFYVVLVYMP 263          
BLAST of mRNA_P-wetherbeei_contig19980.1.1 vs. uniprot
Match: UPI00141270CA (citrate-proton symporter n=1 Tax=Pseudomonas sp. R5(2019) TaxID=2697566 RepID=UPI00141270CA)

HSP 1 Score: 292 bits (747), Expect = 5.670e-94
Identity = 150/253 (59.29%), Postives = 191/253 (75.49%), Query Frame = 1
Query:   10 SREKQVAAAVLGNALEWYDFVVFGMLSVIIADLFFPGDDPYIRLLKTTATFGVGFVMRPIGGVVMGIYADKMGRKAAMQIIIALMTVSLLSIALAPTYSTIGYAAPAIIVFARLLQGFATGGQYAIATSFLVEVAPPGRRGLYGSMTQIGQALAALGGACAGMFLSVMLTPEQTAAWGWRLPFAIGLLIAPVGVYIARHLEESDAFLDHQKTA-GKRLPLLTMLHENLRGVMVTFGLVICGTITYYVVLIYMP 765
            SR +QV AAV+GNALEWYDF+V+G LS IIA LFFP D+ Y  LL   ATFGVGF MRP+GGV++G+YAD+ GRKAAMQ+II LMT+++  IA AP Y+ IG  AP +IV AR+LQGFATGG+YA AT+FLVE AP  RRGLYG+    GQ LA   GA  G  ++ +L+PE   +WGWRLPF +GLLIAPVG+++ RH+EE+D F+D +K +  K + LL +L E  RGV+VT G  I GT+T+YV+L+ MP
Sbjct:    9 SRTRQVTAAVIGNALEWYDFIVYGFLSSIIARLFFPSDNEYTSLLMALATFGVGFFMRPVGGVLLGLYADRKGRKAAMQLIILLMTLAIAMIAFAPDYAAIGIGAPVLIVVARMLQGFATGGEYASATAFLVESAPANRRGLYGAWQLFGQCLAVFAGAGMGALVTHLLSPEALDSWGWRLPFVVGLLIAPVGLWMRRHMEETDDFIDARKASTDKPMGLLDVLREYRRGVLVTMGSTISGTVTFYVMLVNMP 261          
BLAST of mRNA_P-wetherbeei_contig19980.1.1 vs. uniprot
Match: UPI001FF3A7C6 (citrate-proton symporter n=1 Tax=Aromatoleum anaerobium TaxID=182180 RepID=UPI001FF3A7C6)

HSP 1 Score: 292 bits (747), Expect = 8.810e-94
Identity = 146/253 (57.71%), Postives = 187/253 (73.91%), Query Frame = 1
Query:    7 ASREKQVAAAVLGNALEWYDFVVFGMLSVIIADLFFPGDDPYIRLLKTTATFGVGFVMRPIGGVVMGIYADKMGRKAAMQIIIALMTVSLLSIALAPTYSTIGYAAPAIIVFARLLQGFATGGQYAIATSFLVEVAPPGRRGLYGSMTQIGQALAALGGACAGMFLSVMLTPEQTAAWGWRLPFAIGLLIAPVGVYIARHLEESDAFLDHQKTAGKRLPLLTMLHENLRGVMVTFGLVICGTITYYVVLIYMP 765
            A R  QV AAV+GNALEWYDF+VFG L+V+I+ LFFP D  Y  LL TTATFGVGF MRP+GG+++GIYAD+ GRKAA+Q+II +MTV++  IA AP Y+ IG AAP ++V ARLLQGFATGG++A AT+FL+E APP RRGLYGS    GQ LA   GA     ++  L+PE   AWGWR+PF IGLLI PVG++I RHL E++AFL+  +   ++  L  ML  +LR V    G+ +CGT+ +YV+L+YMP
Sbjct:    9 APRTSQVIAAVIGNALEWYDFIVFGFLAVVISRLFFPSDSEYSSLLMTTATFGVGFFMRPVGGILLGIYADRKGRKAALQLIIGMMTVAIALIAFAPPYAAIGIAAPLVLVLARLLQGFATGGEFASATAFLIESAPPNRRGLYGSWQMFGQGLAVFCGAGVTALVTRGLSPEALDAWGWRIPFLIGLLIGPVGLWIRRHLSETEAFLEAHQAPKEKQSLARMLRNHLREVFAVMGVSVCGTVGFYVILVYMP 261          
BLAST of mRNA_P-wetherbeei_contig19980.1.1 vs. uniprot
Match: A0A3N8KFN5_9BURK (MFS transporter n=2 Tax=unclassified Burkholderia TaxID=2613784 RepID=A0A3N8KFN5_9BURK)

HSP 1 Score: 288 bits (738), Expect = 1.250e-92
Identity = 149/253 (58.89%), Postives = 192/253 (75.89%), Query Frame = 1
Query:   10 SREKQVAAAVLGNALEWYDFVVFGMLSVIIADLFFPGDDPYIRLLKTTATFGVGFVMRPIGGVVMGIYADKMGRKAAMQIIIALMTVSLLSIALAPTYSTIGYAAPAIIVFARLLQGFATGGQYAIATSFLVEVAPPGRRGLYGSMTQIGQALAALGGACAGMFLSVMLTPEQTAAWGWRLPFAIGLLIAPVGVYIARHLEESDAFLDHQKTAGK-RLPLLTMLHENLRGVMVTFGLVICGTITYYVVLIYMP 765
            +R +QVAAAV+GN LEWYDF+V+G  S IIA LFFP +  Y  LL + ATFGVGF MRP+GGV++G+YAD+ GRKAAMQ+II LMT+S+  IA APTY+TIG AAP +IV AR+LQGFATGG+YA +T+FLVE AP  RRGLYGS   IGQ L+   GA  G + +  L+P    +WGWR+PFAIGLLI PVG++I RH+EE+DAFLD  K AG+  + +  +L +NLRGV+V+ G  + GT  +YV+L+ +P
Sbjct:    9 TRHRQVAAAVVGNTLEWYDFIVYGFFSGIIARLFFPAESQYASLLMSLATFGVGFFMRPVGGVLLGLYADRKGRKAAMQLIIFLMTLSIALIAFAPTYATIGPAAPVLIVAARMLQGFATGGEYASSTAFLVESAPAHRRGLYGSWQLIGQCLSVFAGAAMGAWATRNLSPGALDSWGWRVPFAIGLLIGPVGLWIRRHMEETDAFLDASKAAGQPAISVSGVLRDNLRGVLVSIGQTVTGTAVFYVMLVNLP 261          
BLAST of mRNA_P-wetherbeei_contig19980.1.1 vs. uniprot
Match: A0A2R3ILF7_PSEAI (MFS transporter n=166 Tax=Bacteria TaxID=2 RepID=A0A2R3ILF7_PSEAI)

HSP 1 Score: 288 bits (737), Expect = 1.720e-92
Identity = 148/252 (58.73%), Postives = 190/252 (75.40%), Query Frame = 1
Query:   10 SREKQVAAAVLGNALEWYDFVVFGMLSVIIADLFFPGDDPYIRLLKTTATFGVGFVMRPIGGVVMGIYADKMGRKAAMQIIIALMTVSLLSIALAPTYSTIGYAAPAIIVFARLLQGFATGGQYAIATSFLVEVAPPGRRGLYGSMTQIGQALAALGGACAGMFLSVMLTPEQTAAWGWRLPFAIGLLIAPVGVYIARHLEESDAFLDHQKTAGKRLPLLTMLHENLRGVMVTFGLVICGTITYYVVLIYMP 765
            SR +QVAAAV+GNALEWYDF+V+G LS +IA LFFP  D Y  LL   ATFGVGF MRP GGV++G+YAD+ GRKAAMQ+II LMT+S+  IALAPT++ IG  AP +IV AR+LQGFATGG++A AT+FLVE APP RRGLYGS    GQ LA   GA  G  ++  L+     +WGWRLPF +GLLI PVG +I R++ E++AFL+ ++  G+RL LL +L  + RGV+V+ GL + GT+++YVVL+ MP
Sbjct:    9 SRTRQVAAAVIGNALEWYDFIVYGFLSSLIARLFFPSGDDYTSLLMALATFGVGFFMRPAGGVLLGLYADRKGRKAAMQLIILLMTLSIALIALAPTHAAIGLGAPLLIVIARMLQGFATGGEFASATAFLVESAPPHRRGLYGSWQLFGQCLAVFTGAGMGALVTHCLSAAALESWGWRLPFLVGLLIGPVGFWIRRYMSETEAFLEARQAPGERLGLLGVLRRHRRGVLVSMGLTVIGTVSFYVVLVNMP 260          
BLAST of mRNA_P-wetherbeei_contig19980.1.1 vs. uniprot
Match: A0A7D5I5Y1_9PSED (MFS transporter n=4 Tax=Pseudomonas TaxID=286 RepID=A0A7D5I5Y1_9PSED)

HSP 1 Score: 288 bits (738), Expect = 1.940e-92
Identity = 145/253 (57.31%), Postives = 186/253 (73.52%), Query Frame = 1
Query:    7 ASREKQVAAAVLGNALEWYDFVVFGMLSVIIADLFFPGDDPYIRLLKTTATFGVGFVMRPIGGVVMGIYADKMGRKAAMQIIIALMTVSLLSIALAPTYSTIGYAAPAIIVFARLLQGFATGGQYAIATSFLVEVAPPGRRGLYGSMTQIGQALAALGGACAGMFLSVMLTPEQTAAWGWRLPFAIGLLIAPVGVYIARHLEESDAFLDHQKTAGKRLPLLTMLHENLRGVMVTFGLVICGTITYYVVLIYMP 765
            A  + QV AAV+GNALEWYDF+VFG L+V+I+ LFFP +  Y  LL  TATFGVGF MRP+GG+++GIYAD+ GRKAA+Q+II +MTVS+  IA AP Y+ IG AAP +IV ARLLQGFATGG++A ATSFL+E AP  RRGLYGS    GQ LA   GA     ++  LTPE   AWGWR+PF IGL+I PVG+++ RHL E+ AFL+ ++   ++  L  ML  +LR V+   GL +CGT+ +YV+L+YMP
Sbjct:    7 APPKHQVIAAVIGNALEWYDFIVFGFLAVVISRLFFPSESEYSSLLMATATFGVGFFMRPVGGILLGIYADRRGRKAALQLIIGMMTVSIAMIAFAPPYAAIGVAAPMLIVLARLLQGFATGGEFASATSFLIESAPANRRGLYGSWQMFGQGLAVFCGAAITALVTNGLTPEALDAWGWRIPFIIGLIIGPVGLWMRRHLSETSAFLEARQAPKEKQSLARMLRNHLREVITVMGLTVCGTVGFYVILVYMP 259          
BLAST of mRNA_P-wetherbeei_contig19980.1.1 vs. uniprot
Match: A0A2D5VSG4_PSESP (MFS transporter n=1 Tax=Pseudomonas sp. TaxID=306 RepID=A0A2D5VSG4_PSESP)

HSP 1 Score: 288 bits (737), Expect = 2.670e-92
Identity = 144/253 (56.92%), Postives = 187/253 (73.91%), Query Frame = 1
Query:    7 ASREKQVAAAVLGNALEWYDFVVFGMLSVIIADLFFPGDDPYIRLLKTTATFGVGFVMRPIGGVVMGIYADKMGRKAAMQIIIALMTVSLLSIALAPTYSTIGYAAPAIIVFARLLQGFATGGQYAIATSFLVEVAPPGRRGLYGSMTQIGQALAALGGACAGMFLSVMLTPEQTAAWGWRLPFAIGLLIAPVGVYIARHLEESDAFLDHQKTAGKRLPLLTMLHENLRGVMVTFGLVICGTITYYVVLIYMP 765
            A    QV AAV+GNALEWYDF++FG L+V+I+ LFFP +  Y  LL  TATFGVGF MRP+GG+++GIYAD+ GRKAA+Q+IIA+MTVS+  IA AP ++ IG AAP +IVFARLLQGFATGG++A ATSFL+E AP  RRGLYGS    GQ LA   GA     ++  L+PE   +WGWR+PF IGL+I PVG++I RHL E++AFL+ ++   ++  L  ML  +LRGV     L +CGT+ +YV+L+YMP
Sbjct:    7 APPRNQVVAAVIGNALEWYDFIIFGFLAVVISRLFFPAESEYSSLLMATATFGVGFFMRPVGGILLGIYADRRGRKAALQLIIAMMTVSIALIAFAPPFAAIGIAAPLLIVFARLLQGFATGGEFASATSFLIESAPSNRRGLYGSWQMFGQGLAVFCGAGITALVTNGLSPEALDSWGWRIPFIIGLVIGPVGLWIRRHLSETEAFLEARQAPKEKQSLARMLRNHLRGVATVMALTVCGTVGFYVILVYMP 259          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19980.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1N6YCD6_9RHOO4.130e-9758.89Predicted arabinose efflux permease, MFS family n=... [more]
H0Q4I4_9RHOO5.180e-9558.10Major facilitator superfamily MFS_1 n=1 Tax=Azoarc... [more]
A0A010RPI2_PSEFL7.540e-9557.31Membrane protein n=1 Tax=Pseudomonas fluorescens H... [more]
A0A1N6I8L1_9BURK1.030e-9458.63Predicted arabinose efflux permease, MFS family n=... [more]
UPI00141270CA5.670e-9459.29citrate-proton symporter n=1 Tax=Pseudomonas sp. R... [more]
UPI001FF3A7C68.810e-9457.71citrate-proton symporter n=1 Tax=Aromatoleum anaer... [more]
A0A3N8KFN5_9BURK1.250e-9258.89MFS transporter n=2 Tax=unclassified Burkholderia ... [more]
A0A2R3ILF7_PSEAI1.720e-9258.73MFS transporter n=166 Tax=Bacteria TaxID=2 RepID=A... [more]
A0A7D5I5Y1_9PSED1.940e-9257.31MFS transporter n=4 Tax=Pseudomonas TaxID=286 RepI... [more]
A0A2D5VSG4_PSESP2.670e-9256.92MFS transporter n=1 Tax=Pseudomonas sp. TaxID=306 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig19980contigP-wetherbeei_contig19980:486..1250 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog748247.AZKH_p0014
PFAMsMFS_1,Sugar_tr
Model size765
Max annot lvl1224|Proteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue8.48e-96
EggNOG OGsCOG0477@1|root,COG0477@2|Bacteria,1MU46@1224|Proteobacteria,2VHKK@28216|Betaproteobacteria,2KW0D@206389|Rhodocyclales
DescriptionSugar (and other) transporter
Cds size765
COG categoryEGP
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186186.6705885-CDS-P-wetherbeei_contig19980:485..12501683186186.6705885-CDS-P-wetherbeei_contig19980:485..1250Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig19980 486..1250 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig19980.1.1prot_P-wetherbeei_contig19980.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig19980 486..1250 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig19980.1.1

>prot_P-wetherbeei_contig19980.1.1 ID=prot_P-wetherbeei_contig19980.1.1|Name=mRNA_P-wetherbeei_contig19980.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=255bp
MPASREKQVAAAVLGNALEWYDFVVFGMLSVIIADLFFPGDDPYIRLLKT
TATFGVGFVMRPIGGVVMGIYADKMGRKAAMQIIIALMTVSLLSIALAPT
YSTIGYAAPAIIVFARLLQGFATGGQYAIATSFLVEVAPPGRRGLYGSMT
QIGQALAALGGACAGMFLSVMLTPEQTAAWGWRLPFAIGLLIAPVGVYIA
RHLEESDAFLDHQKTAGKRLPLLTMLHENLRGVMVTFGLVICGTITYYVV
LIYMP
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mRNA from alignment at P-wetherbeei_contig19980:486..1250+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig19980.1.1 ID=mRNA_P-wetherbeei_contig19980.1.1|Name=mRNA_P-wetherbeei_contig19980.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=765bp|location=Sequence derived from alignment at P-wetherbeei_contig19980:486..1250+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCCTGCGTCGCGAGAGAAACAGGTAGCCGCTGCCGTGCTCGGCAACGC GCTCGAGTGGTACGACTTCGTCGTGTTCGGCATGTTGAGCGTGATCATCG CCGACCTGTTCTTTCCCGGCGACGATCCCTACATCCGTTTATTAAAGACT ACCGCGACCTTCGGCGTGGGCTTCGTCATGCGCCCCATCGGTGGGGTGGT GATGGGCATCTACGCCGACAAGATGGGCCGCAAGGCAGCCATGCAGATCA TCATCGCCCTGATGACGGTCTCGCTGCTGAGCATCGCCCTCGCACCGACC TATTCCACCATCGGCTATGCGGCGCCGGCCATCATCGTGTTCGCGCGGCT GCTGCAGGGTTTCGCTACGGGTGGCCAATACGCCATCGCCACCTCCTTTC TGGTGGAAGTAGCGCCGCCGGGGCGACGTGGGTTGTATGGCTCGATGACG CAGATAGGCCAGGCCTTGGCCGCCCTCGGCGGCGCCTGTGCCGGCATGTT TCTGAGCGTGATGCTGACCCCGGAGCAGACCGCTGCCTGGGGCTGGCGTT TGCCGTTTGCTATCGGTCTGTTGATTGCACCGGTAGGTGTTTATATCGCC CGTCACCTGGAAGAGAGCGATGCCTTTCTCGACCACCAGAAAACTGCCGG CAAGCGTCTGCCGCTGTTGACCATGCTGCACGAGAATCTGCGTGGCGTGA TGGTGACTTTCGGTCTGGTGATCTGCGGCACCATCACCTACTACGTGGTC CTGATCTACATGCCG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig19980:486..1250+

>mRNA_P-wetherbeei_contig19980.1.1 ID=mRNA_P-wetherbeei_contig19980.1.1|Name=mRNA_P-wetherbeei_contig19980.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=765bp|location=Sequence derived from alignment at P-wetherbeei_contig19980:486..1250+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCCTGCGTCGCGAGAGAAACAGGTAGCCGCTGCCGTGCTCGGCAACGC
GCTCGAGTGGTACGACTTCGTCGTGTTCGGCATGTTGAGCGTGATCATCG
CCGACCTGTTCTTTCCCGGCGACGATCCCTACATCCGTTTATTAAAGACT
ACCGCGACCTTCGGCGTGGGCTTCGTCATGCGCCCCATCGGTGGGGTGGT
GATGGGCATCTACGCCGACAAGATGGGCCGCAAGGCAGCCATGCAGATCA
TCATCGCCCTGATGACGGTCTCGCTGCTGAGCATCGCCCTCGCACCGACC
TATTCCACCATCGGCTATGCGGCGCCGGCCATCATCGTGTTCGCGCGGCT
GCTGCAGGGTTTCGCTACGGGTGGCCAATACGCCATCGCCACCTCCTTTC
TGGTGGAAGTAGCGCCGCCGGGGCGACGTGGGTTGTATGGCTCGATGACG
CAGATAGGCCAGGCCTTGGCCGCCCTCGGCGGCGCCTGTGCCGGCATGTT
TCTGAGCGTGATGCTGACCCCGGAGCAGACCGCTGCCTGGGGCTGGCGTT
TGCCGTTTGCTATCGGTCTGTTGATTGCACCGGTAGGTGTTTATATCGCC
CGTCACCTGGAAGAGAGCGATGCCTTTCTCGACCACCAGAAAACTGCCGG
CAAGCGTCTGCCGCTGTTGACCATGCTGCACGAGAATCTGCGTGGCGTGA
TGGTGACTTTCGGTCTGGTGATCTGCGGCACCATCACCTACTACGTGGTC
CTGATCTACATGCCG
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