mRNA_P-wetherbeei_contig199.5.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig199.5.1 vs. uniprot
Match: D8LLE4_ECTSI (PRLI-interacting factor L-like (ISS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLE4_ECTSI) HSP 1 Score: 98.2 bits (243), Expect = 4.960e-25 Identity = 43/83 (51.81%), Postives = 61/83 (73.49%), Query Frame = 1
Query: 1 FNDFMADLMGSVAPDLYRYKGVLSFDGQLPKFVFQGIHDQVDCQPSSHDWAEGEERVNRLVFIGHDLDQKSIEAGLRECMVAE 249
FN FMA+ + + +L+R KGVL+F Q KFVFQG+H+Q+DC+P+ + WAEGEERV+++VFIG DLD+ I + C+V E
Sbjct: 2 FNKFMAEFLRENSANLFRSKGVLAFKDQERKFVFQGVHEQIDCEPAINGWAEGEERVSKIVFIGLDLDKDYITESFKACIVPE 84
BLAST of mRNA_P-wetherbeei_contig199.5.1 vs. uniprot
Match: A0A7S2K368_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K368_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 5.640e-25 Identity = 48/85 (56.47%), Postives = 59/85 (69.41%), Query Frame = 1
Query: 1 FNDFMADLMGSVAPDLYRYKGVLSFDGQ-LPKFVFQGIHDQVDCQPSSHDWAEGEERVNRLVFIGHDLDQKSIEAGLRECMVAEE 252
FN FM DL+ A DLYR KG+LSF GQ KFVFQG+H+Q++ PS W EGEER+NR VFIG +LD+ + GL EC+ EE
Sbjct: 21 FNMFMMDLLKERAADLYRTKGLLSFQGQGNSKFVFQGVHEQINFGPSKKPWEEGEERLNRFVFIGKNLDRDELTKGLMECLYKEE 105
BLAST of mRNA_P-wetherbeei_contig199.5.1 vs. uniprot
Match: A0A7S2SGY9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SGY9_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 3.610e-24 Identity = 47/86 (54.65%), Postives = 61/86 (70.93%), Query Frame = 1
Query: 1 FNDFMADLMGSVAPDLYRYKGVLSFDGQ-LPKFVFQGIHDQVDCQPSSHDWAEGEERVNRLVFIGHDLDQKSIEAGLRECMVAEEA 255
FN FM DL+ A DLYR KG+LSF GQ KFVFQG+H+Q++ P+ + WAEGE R+N+ VFIG +LD+ + GL EC+ EEA
Sbjct: 49 FNMFMMDLLRERAADLYRTKGLLSFHGQGNTKFVFQGVHEQINFGPAKNPWAEGETRLNKFVFIGKNLDRAELTKGLMECLYKEEA 134
BLAST of mRNA_P-wetherbeei_contig199.5.1 vs. uniprot
Match: A0A7S0AEA3_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AEA3_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 2.280e-23 Identity = 46/85 (54.12%), Postives = 61/85 (71.76%), Query Frame = 1
Query: 1 FNDFMADLMGSVAPDLYRYKGVLSFDGQLP-KFVFQGIHDQVDCQPSSHDWAEGEERVNRLVFIGHDLDQKSIEAGLRECMVAEE 252
FN FM DL+ A DLYR KG+LSF GQ KFVFQG+H+Q++ P+ + WAEGEER+N+ VFIG +LD+K + L EC+ E+
Sbjct: 120 FNMFMMDLLKDRAADLYRTKGLLSFHGQGDTKFVFQGVHEQINFGPAKNPWAEGEERINKFVFIGKNLDRKELTKSLMECIYKED 204
BLAST of mRNA_P-wetherbeei_contig199.5.1 vs. uniprot
Match: A0A7S2K434_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K434_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 9.380e-23 Identity = 48/85 (56.47%), Postives = 59/85 (69.41%), Query Frame = 1
Query: 1 FNDFMADLMGSVAPDLYRYKGVLSFDGQ-LPKFVFQGIHDQVDCQPSSHDWAEGEERVNRLVFIGHDLDQKSIEAGLRECMVAEE 252
FN FM DL+ A DLYR KG+LSF GQ KFVFQG+H+Q++ PS W EGEER+NR VFIG +LD+ + GL EC+ EE
Sbjct: 259 FNMFMMDLLKERAADLYRTKGLLSFQGQGNSKFVFQGVHEQINFGPSKKPWEEGEERLNRFVFIGKNLDRDELTKGLMECLYKEE 343
BLAST of mRNA_P-wetherbeei_contig199.5.1 vs. uniprot
Match: K0S4D8_THAOC (CobW C-terminal domain-containing protein n=2 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S4D8_THAOC) HSP 1 Score: 97.8 bits (242), Expect = 2.450e-22 Identity = 46/84 (54.76%), Postives = 59/84 (70.24%), Query Frame = 1
Query: 1 FNDFMADLMGSVAPDLYRYKGVLSFDGQ-LPKFVFQGIHDQVDCQPSSHDWAEGEERVNRLVFIGHDLDQKSIEAGLRECMVAE 249
FN FM DL+ A DLYR KGVLSF GQ KFVFQG+HDQ++ P+ + W E E+R+N+ VFIG +LD+K + GL EC+ E
Sbjct: 280 FNMFMMDLLRERASDLYRTKGVLSFHGQGATKFVFQGVHDQINFGPAKNPWGEDEKRINKFVFIGKNLDRKELTEGLMECLYKE 363
BLAST of mRNA_P-wetherbeei_contig199.5.1 vs. uniprot
Match: A0A7S2IJ00_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IJ00_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 3.780e-22 Identity = 46/85 (54.12%), Postives = 60/85 (70.59%), Query Frame = 1
Query: 1 FNDFMADLMGSVAPDLYRYKGVLSFDGQLP-KFVFQGIHDQVDCQPSSHDWAEGEERVNRLVFIGHDLDQKSIEAGLRECMVAEE 252
FN FM DL+ A DLYR KG+LSF GQ KFVFQG+H+Q++ P+ W EGEER+N+ VFIG +LD++ + GL EC+ EE
Sbjct: 262 FNMFMMDLLRERAADLYRTKGMLSFHGQGDQKFVFQGVHEQINFGPAKKPWEEGEERINKFVFIGKNLDKQELTKGLMECLYKEE 346
BLAST of mRNA_P-wetherbeei_contig199.5.1 vs. uniprot
Match: A0A6S8VW86_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8VW86_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 7.170e-22 Identity = 47/85 (55.29%), Postives = 58/85 (68.24%), Query Frame = 1
Query: 1 FNDFMADLMGSVAPDLYRYKGVLSFDGQLP-KFVFQGIHDQVDCQPSSHDWAEGEERVNRLVFIGHDLDQKSIEAGLRECMVAEE 252
FN FM DL+ A DLYR KG+LSF GQ KFVFQG+H+Q++ PS W GEERVN+ VFIG +LD+ + GL EC+ EE
Sbjct: 260 FNMFMMDLLRERAADLYRTKGLLSFHGQGDTKFVFQGVHEQINFGPSKEPWKSGEERVNKFVFIGKNLDRTELTKGLMECLYKEE 344
BLAST of mRNA_P-wetherbeei_contig199.5.1 vs. uniprot
Match: A0A7S2RIA0_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RIA0_9STRA) HSP 1 Score: 92.0 bits (227), Expect = 1.090e-21 Identity = 44/85 (51.76%), Postives = 58/85 (68.24%), Query Frame = 1
Query: 1 FNDFMADLMGSVAPDLYRYKGVLSFDGQLP-KFVFQGIHDQVDCQPSSHDWAEGEERVNRLVFIGHDLDQKSIEAGLRECMVAEE 252
FN FM DL+ A DLYR KG+LSF GQ KFVFQG+H+Q++ P+ W EGEER+N+ VFIG +L++ + L EC+ EE
Sbjct: 80 FNMFMMDLLRERAADLYRTKGLLSFHGQGDTKFVFQGVHEQINFGPADKPWKEGEERINKFVFIGKNLNRDELTKSLMECLYKEE 164
BLAST of mRNA_P-wetherbeei_contig199.5.1 vs. uniprot
Match: A0A6U1ZV79_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A6U1ZV79_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 1.330e-21 Identity = 46/85 (54.12%), Postives = 60/85 (70.59%), Query Frame = 1
Query: 1 FNDFMADLMGSVAPDLYRYKGVLSFDGQLP-KFVFQGIHDQVDCQPSSHDWAEGEERVNRLVFIGHDLDQKSIEAGLRECMVAEE 252
FN FM DL+ A DLYR KG+LSF GQ KFVFQG+H+Q++ P+ WAEGEERVN+ VFIG +L++K + L EC+ E+
Sbjct: 256 FNMFMMDLLRERAEDLYRTKGLLSFHGQGDTKFVFQGVHEQINFGPAQKPWAEGEERVNKFVFIGKNLNRKELTKSLMECLYKED 340 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig199.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig199.5.1 >prot_P-wetherbeei_contig199.5.1 ID=prot_P-wetherbeei_contig199.5.1|Name=mRNA_P-wetherbeei_contig199.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=83bp MADLMGSVAPDLYRYKGVLSFDGQLPKFVFQGIHDQVDCQPSSHDWAEGEback to top mRNA from alignment at P-wetherbeei_contig199:10370..10979- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig199.5.1 ID=mRNA_P-wetherbeei_contig199.5.1|Name=mRNA_P-wetherbeei_contig199.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=610bp|location=Sequence derived from alignment at P-wetherbeei_contig199:10370..10979- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig199:10370..10979- >mRNA_P-wetherbeei_contig199.5.1 ID=mRNA_P-wetherbeei_contig199.5.1|Name=mRNA_P-wetherbeei_contig199.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=249bp|location=Sequence derived from alignment at P-wetherbeei_contig199:10370..10979- (Phaeothamnion wetherbeei SAG_119_79)back to top |