mRNA_P-wetherbeei_contig19812.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig19812.1.1 vs. uniprot
Match: A0A7X9KIX2_9ACTN (Uncharacterized protein (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X9KIX2_9ACTN) HSP 1 Score: 81.6 bits (200), Expect = 8.110e-15 Identity = 46/106 (43.40%), Postives = 62/106 (58.49%), Query Frame = 1
Query: 205 LAQRIVEVNLGRTMNDGARFVTGALIEPGWQLNVPANAPPPGP--STHTVQAGDSYWAVSEHHLDEELHREATNREVLEYVHRMMDQNAPLLHHRDPALIIPGEVL 516
L RI+E+N GR G + G + G ++ +P P P H V AGDSYW +++ HL L R+AT EVL+Y +M N PLL HR+PALIIPGE++
Sbjct: 185 LRDRIIELNAGR-FGPGGQQWQGGVFPAGMEVVLPQEQAVPTPLGPAHAVIAGDSYWEIADDHLSTALARQATPAEVLDYTLDLMSYNHPLLGHREPALIIPGELV 289
BLAST of mRNA_P-wetherbeei_contig19812.1.1 vs. uniprot
Match: A0A812JVD8_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812JVD8_9DINO) HSP 1 Score: 75.5 bits (184), Expect = 1.160e-12 Identity = 48/126 (38.10%), Postives = 67/126 (53.17%), Query Frame = 1
Query: 40 PALAVAPAISISHEATVSSVPQTLAPVGHTVE--VVRAGDSVWSIAERVAGGGD--VSVLAQRIVEVNLGRTMNDGARFVTGALIEPGWQLNVPANAPPPGPST-----HTVQAGDSYWAVSEHHL 390
P +A APA+ + EA + P+ AP VR GDSV+ IAER+AG +S LA I+++NLG+ M DG F A I+ GW L +P P P T H V G++ W+++E L
Sbjct: 531 PTVAAAPAVGGNVEA--APAPERSAPASDATGSYTVRPGDSVYGIAERLAGPDQAAISALANGILDLNLGQRMVDGQMFSNAAYIDVGWVLQLPPGTPSPSSDTVTAAAHVVDEGETLWSIAEDEL 654
BLAST of mRNA_P-wetherbeei_contig19812.1.1 vs. uniprot
Match: UPI0011612A98 (LysM peptidoglycan-binding domain-containing protein n=1 Tax=Streptomyces sp. CB02009 TaxID=1703938 RepID=UPI0011612A98) HSP 1 Score: 73.9 bits (180), Expect = 2.860e-12 Identity = 56/145 (38.62%), Postives = 76/145 (52.41%), Query Frame = 1
Query: 124 HTVEVVRAGDSVWSIAERVAGGGDVSVLAQRIVEVNLGRTMNDGARFVTGALIEPGWQLNVP------ANAPPPGPS--THTVQAGDSYWAVSEHHLDEELHREATNREVLEYVHRMMDQNAPLLH---HRDPALIIPGEVLQFP 525
+TV R +S+WSIAE+V G G+ L +I + N GR M DG+ F A I+PGW L +P A A P PS ++TVQ GD+ W V+E EEL E+ E ++ AP +P LI+PG+VL P
Sbjct: 171 YTVRDARPAESLWSIAEKVYGHGE---LYTKIADANEGRQMTDGSTFHADAPIQPGWILALPEAPTTQAPAAPSQPSGGSYTVQGGDTLWNVAE----EELGDGERYGELFE-----ANKGAPTPDGGTFDNPDLIVPGQVLDLP 303
BLAST of mRNA_P-wetherbeei_contig19812.1.1 vs. uniprot
Match: A0A2G6KFH6_9ACTN (LysM domain-containing protein n=1 Tax=Ilumatobacter coccineus TaxID=467094 RepID=A0A2G6KFH6_9ACTN) HSP 1 Score: 72.4 bits (176), Expect = 1.330e-11 Identity = 55/141 (39.01%), Postives = 72/141 (51.06%), Query Frame = 1
Query: 136 VVRAGDSVWSIAERVAGGGDVSV--LAQRIVEVNLGRTMNDGARFVTGALIEPGWQLNVP-----ANAP---PPGPSTHTVQAGDSYWAVSEHHLDEELHREATNREVLEYVH-RMMDQNAPLLHHRDPALIIPGEVLQFP 525
VVR+GDS++ IA+R+AG ++ A I+E NLGR M DG RFV A I+ GW L +P A AP P GP H V G+S W+++ + L RE+ + R D L DP LI PG L P
Sbjct: 303 VVRSGDSIYGIAQRLAGPDAKAIDRFASAIIEANLGREMGDGQRFVNAAFIDVGWVLQLPPLPSLAQAPTLAPVGP-VHLVTEGESLWSIAA----DRLGAGERWREIFDLNQSRQFDDGRQL---DDPDLIHPGWELYLP 435
BLAST of mRNA_P-wetherbeei_contig19812.1.1 vs. uniprot
Match: A0A4R7HW13_9ACTN (Two-component SAPR family response regulator n=1 Tax=Ilumatobacter fluminis TaxID=467091 RepID=A0A4R7HW13_9ACTN) HSP 1 Score: 72.0 bits (175), Expect = 1.790e-11 Identity = 38/91 (41.76%), Postives = 52/91 (57.14%), Query Frame = 1
Query: 139 VRAGDSVWSIAERVAGG--GDVSVLAQRIVEVNLGRTMNDGARFVTGALIEPGWQLNVPANAPPPGPST-----HTVQAGDSYWAVSEHHL 390
VR GDSV+ IAER+AG +S LA I+++NLG+ M DG F A I+ GW L +P P P T H V G++ W+++E L
Sbjct: 206 VRPGDSVYGIAERLAGPDQASISALANSILDLNLGQRMVDGQMFSNAAYIDVGWVLQLPPGTPSPSSDTVTAAAHVVDEGETLWSIAEDEL 296
BLAST of mRNA_P-wetherbeei_contig19812.1.1 vs. uniprot
Match: UPI0018F72F85 (LysM peptidoglycan-binding domain-containing protein n=1 Tax=Streptomyces sp. N35 TaxID=2795730 RepID=UPI0018F72F85) HSP 1 Score: 71.6 bits (174), Expect = 2.460e-11 Identity = 57/158 (36.08%), Postives = 73/158 (46.20%), Query Frame = 1
Query: 115 PVGHTVEVVRAGDSVWSIAERVAGGGDVSVLAQRIVEVNLGRTMNDGARFVTGALIEPGWQLNVPANAPPPGPSTHTVQAG------DSYWAVSEHH-------------LDEELHREATNREVLEYVHRMMDQNAPLLH-HRDPALIIPGEVLQFPP 528
P +TV+ R +S+WSIAE++ G G++ L +V+ N GRTM DG RFV A I PGWQL +PA+ P S + Q G D A EH LDE + A E + P H DP LI PG+ L PP
Sbjct: 173 PPTYTVQDARPAESLWSIAEKLYGRGELYTL---LVDANEGRTMVDGQRFVAEAPIRPGWQLALPADVPLAEESRISAQGGSVSVTADDVPAGGEHERVVAPGDSLSGIALDETGNAHAWP----ELFEENQGEEQPYGHTFTDPDLIYPGQKLTLPP 323
BLAST of mRNA_P-wetherbeei_contig19812.1.1 vs. uniprot
Match: A0A3R9WCL2_9ACTN (LysM peptidoglycan-binding domain-containing protein n=1 Tax=Streptomyces sp. WAC01280 TaxID=2487424 RepID=A0A3R9WCL2_9ACTN) HSP 1 Score: 70.1 bits (170), Expect = 8.330e-11 Identity = 48/128 (37.50%), Postives = 66/128 (51.56%), Query Frame = 1
Query: 40 PALAVAPAISISHEATVSSVPQTLAPVGHTVEVVRAGDSVWSIAERVAGGGDVSVLAQRIVEVNLGRTMNDGARFVTGALIEPGWQLNVP-----------ANAPPPGPSTHTVQAGDSYWAVSEHHL 390
P A APA H A + +T A +TV+ R +S+WSIAE++ G G+ L +I + N GR M DG+ F A I PGW L +P A + GP+ +TVQ GD+ W V+E L
Sbjct: 144 PDAAAAPA---EHSAQTTGTERTAART-YTVQDARPAESLWSIAEKLYGHGE---LYTKIADANEGRRMADGSVFRADAPIHPGWILTLPDAPATRTDDPDAPSRQAGPAAYTVQGGDTLWKVAEEEL 264
BLAST of mRNA_P-wetherbeei_contig19812.1.1 vs. uniprot
Match: A0A6N2DFZ4_9ACTN (LysM peptidoglycan-binding domain-containing protein n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A6N2DFZ4_9ACTN) HSP 1 Score: 69.3 bits (168), Expect = 1.530e-10 Identity = 36/80 (45.00%), Postives = 50/80 (62.50%), Query Frame = 1
Query: 139 VRAGDSVWSIAERVAGGGDVSV--LAQRIVEVNLGRTMNDGARFVTGALIEPGWQLNVPANAPPPGPSTHTVQAGDSYWA 372
V GDSV++IAER+AG S +A+ I+++NLG M DG RF A IEPGW L++P +A S H+ AG + W+
Sbjct: 192 VAPGDSVYAIAERLAGADRSSTVSIAEEILDLNLGAVMPDGQRFTNAAYIEPGWVLHLPVSASGTIDSAHSRSAGANGWS 271
BLAST of mRNA_P-wetherbeei_contig19812.1.1 vs. uniprot
Match: UPI00165C69A9 (LysM peptidoglycan-binding domain-containing protein n=1 Tax=Streptomyces sp. TRM68367 TaxID=2758415 RepID=UPI00165C69A9) HSP 1 Score: 63.5 bits (153), Expect = 1.210e-8 Identity = 37/108 (34.26%), Postives = 55/108 (50.93%), Query Frame = 1
Query: 124 HTVEVVRAGDSVWSIAERVAGGGDVSVLAQRIVEVNLGRTMNDGARFVTGALIEPGWQLNVP--------------ANAPPPGPSTHTVQAGDSYWAVSEHHLDEELH 405
+TV+ R +S+WSIAE++ G G+ L +I + N G M DG+ F I+PGW L +P A A G ++TV AGD+ W ++E L + H
Sbjct: 177 YTVQDARPAESLWSIAEKLYGHGE---LYTKIADANEGHQMADGSVFHANEPIQPGWTLLLPDDPTTGLDAQLEQTAPAQSAGTESYTVHAGDTLWGIAEDELGDGAH 281
BLAST of mRNA_P-wetherbeei_contig19812.1.1 vs. uniprot
Match: UPI001C26E7B0 (LysM peptidoglycan-binding domain-containing protein n=1 Tax=Streptomyces sp. AC555_RSS877 TaxID=2823688 RepID=UPI001C26E7B0) HSP 1 Score: 60.1 bits (144), Expect = 2.390e-7 Identity = 35/86 (40.70%), Postives = 47/86 (54.65%), Query Frame = 1
Query: 124 HTVEVVRAGDSVWSIAERVAGGGDVSVLAQRIVEVNLGRTMNDGARFVTGALIEPGWQLNVPANAPPPGPSTHTVQAGDSYWAVSE 381
+TV +R +S+W IAER G G+ L + I +N GRTM DG F + ++PGWQL +P A P G Q GDS A +
Sbjct: 173 YTVRDMRPAESLWGIAERELGDGE---LWREIASLNEGRTMVDGQVFRANSFLQPGWQLKMPDTANPVGGVR--TQLGDSAPAAGQ 253 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19812.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig19812.1.1 >prot_P-wetherbeei_contig19812.1.1 ID=prot_P-wetherbeei_contig19812.1.1|Name=mRNA_P-wetherbeei_contig19812.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=176bp GLVGVLPVAGAAAPALAVAPAISISHEATVSSVPQTLAPVGHTVEVVRAGback to top mRNA from alignment at P-wetherbeei_contig19812:3..530- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig19812.1.1 ID=mRNA_P-wetherbeei_contig19812.1.1|Name=mRNA_P-wetherbeei_contig19812.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=528bp|location=Sequence derived from alignment at P-wetherbeei_contig19812:3..530- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig19812:3..530- >mRNA_P-wetherbeei_contig19812.1.1 ID=mRNA_P-wetherbeei_contig19812.1.1|Name=mRNA_P-wetherbeei_contig19812.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=528bp|location=Sequence derived from alignment at P-wetherbeei_contig19812:3..530- (Phaeothamnion wetherbeei SAG_119_79)back to top |