prot_P-wetherbeei_contig1977.3.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1977.3.1
Unique Nameprot_P-wetherbeei_contig1977.3.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length121
Homology
[Close]
BLAST of mRNA_P-wetherbeei_contig1977.3.1 vs. uniprot
Match: A0A6H5KQJ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQJ2_9PHAE)

HSP 1 Score: 132 bits (332), Expect = 1.320e-37
Identity = 63/117 (53.85%), Postives = 85/117 (72.65%), Query Frame = 0 
Query:    4 VSWFNRGFPRLAKLGYAPKFQALAAHWPPRSTNVQKWRSAQVLQLLEILGLQSLEGCLREQEFLPEGDTEESPFGSLDAPEVDEIFSGSGADAGEVEALKVSLRYLKGEFFDVSVMA 120
            ++W   G P L K GYA KF+ L+  +PP S++V KW  +++++++ ILGL  LE  LREQEFLPE   EESPFGSLDA E++E+F  SG    E++A+KV+LRYLKGEF +VSV A
Sbjct:    3 IAWLYAGHPALVKNGYAEKFEELSRQYPPSSSDVSKWTGSELMKMIGILGLSGLEPALREQEFLPENPEEESPFGSLDASELEEVFEDSGVPRIEIDAIKVALRYLKGEFTNVSVKA 119
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1977.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KQJ2_9PHAE1.320e-3753.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1977contigP-wetherbeei_contig1977:2921..3862 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1977.3.1mRNA_P-wetherbeei_contig1977.3.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1977 2466..3923 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1977.3.1 ID=prot_P-wetherbeei_contig1977.3.1|Name=mRNA_P-wetherbeei_contig1977.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=121bp
MGDVSWFNRGFPRLAKLGYAPKFQALAAHWPPRSTNVQKWRSAQVLQLLE
ILGLQSLEGCLREQEFLPEGDTEESPFGSLDAPEVDEIFSGSGADAGEVE
ALKVSLRYLKGEFFDVSVMA*
back to top