mRNA_P-wetherbeei_contig19735.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig19735.1.1 vs. uniprot
Match: A0A1Z9UBS6_9GAMM (Uncharacterized protein n=3 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A1Z9UBS6_9GAMM) HSP 1 Score: 269 bits (688), Expect = 5.230e-89 Identity = 134/171 (78.36%), Postives = 147/171 (85.96%), Query Frame = 1
Query: 1 PEDAYAYVVYQTGALQAALRVHGMKLHHIKPHGAFYSVLRTNEALAEAVADAIVAIADQPMLYWPAPTDAAMPVAARKRGIRVVGEIYPDLSYAPDGALVLQRAKHVTDTEFAAAQVRRYVETGKVLANDGSLLALDAESLCIHGDGPNATEVGAAVRAALAEIGCRIAPV 513
PEDA+AY VYQTGALQAAL+ GMKLHH+KPHGA YSVLRT+EALA AVADAI + D PMLYWPAPTDAAMPVAARK+GIRVVGEIYPDL YA DG LV+QR KH TD FA +QV+RYVETGKV A DGSL+ LDAE+LCIHGDGPNAT+VGAA+R L EIGC IAPV
Sbjct: 78 PEDAFAYTVYQTGALQAALKTAGMKLHHVKPHGALYSVLRTDEALATAVADAISLLTDNPMLYWPAPTDAAMPVAARKKGIRVVGEIYPDLQYAADGTLVIQREKHETDVGFAVSQVKRYVETGKVEAIDGSLVTLDAEALCIHGDGPNATDVGAAIRLTLGEIGCEIAPV 248
BLAST of mRNA_P-wetherbeei_contig19735.1.1 vs. uniprot
Match: A0A3D5DG85_9GAMM (LamB/YcsF family protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DG85_9GAMM) HSP 1 Score: 251 bits (641), Expect = 7.520e-82 Identity = 126/172 (73.26%), Postives = 143/172 (83.14%), Query Frame = 1
Query: 1 PEDAYAYVVYQTGALQAALRVHGMKLHHIKPHGAFYSVLRTNEALAEAVADAIVAIADQPMLYWPAPTDAAMPVAARKRGIRVVGEIYPDLSYAPDGALVLQRAKHVTDTEFAAAQVRRYVETGKVLANDGSLLALDAESLCIHGDGPNATEVGAAVRAALAEIGCRIAPVM 516
PEDAYAYVVYQ GALQ AL GM+LHHIKPHGAFYSVL+T+E LA AVA AI +++ P+LYWPAPT AAMP AA+K GIRVVGEIYPDL YAPDG+L+LQR KH TD +FAA+QV+RYVETGKV ANDGSL+ LDAESLCIHGDGPN+ V A+R L IGC+I PVM
Sbjct: 78 PEDAYAYVVYQVGALQGALATQGMQLHHIKPHGAFYSVLKTDEDLATAVAAAIKELSEDPILYWPAPTTAAMPSAAKKLGIRVVGEIYPDLMYAPDGSLILQREKHETDVKFAASQVQRYVETGKVEANDGSLVELDAESLCIHGDGPNSVSVADAIRETLDGIGCKIDPVM 249
BLAST of mRNA_P-wetherbeei_contig19735.1.1 vs. uniprot
Match: A0A7Y3M6T2_9DELT (5-oxoprolinase subunit PxpA n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7Y3M6T2_9DELT) HSP 1 Score: 235 bits (600), Expect = 1.540e-75 Identity = 115/173 (66.47%), Postives = 136/173 (78.61%), Query Frame = 1
Query: 1 PEDAYAYVVYQTGALQAALRVHGMKLHHIKPHGAFYSVLRTNEALAEAVADAIVAIADQPMLYWPAPTDAAMPVAARKRGIRVVGEIYPDLSYAPDGALVLQRAKHVTDTEFAAAQVRRYVETGKVLANDGSLLALDAESLCIHGDGPNATEVGAAVRAALAEIGCRIAPVMA 519
PEDA+AYVVYQ+GALQ AL +HG+ LHHIKPHGAFYS+LRT E LA AVA+A+ + P+LYWPAPTD+A+P A +K+GIRVVGEIYPDL YAPDG+L+LQRAKH TD A AQV RYV +G+V A DGS +ALDAESLCIHGDGPN EV A+R L + C + P A
Sbjct: 85 PEDAHAYVVYQSGALQGALTMHGLSLHHIKPHGAFYSILRTEEDLAAAVAEAVGKLTADPVLYWPAPTDSALPAACKKKGIRVVGEIYPDLEYAPDGSLILQRAKHETDVAQACAQVERYVTSGEVEAIDGSRIALDAESLCIHGDGPNCVEVVTAIRQTLKNLECEVKPATA 257
BLAST of mRNA_P-wetherbeei_contig19735.1.1 vs. uniprot
Match: A0A4R4XSF7_9ACTN (LamB/YcsF family protein n=1 Tax=Actinomadura sp. KC06 TaxID=2530369 RepID=A0A4R4XSF7_9ACTN) HSP 1 Score: 169 bits (427), Expect = 2.360e-49 Identity = 87/172 (50.58%), Postives = 115/172 (66.86%), Query Frame = 1
Query: 1 PEDAYAYVVYQTGALQAALRVHGMKLHHIKPHGAFYSVLRTNEALAEAVADAIVAIADQPMLYWPAPT-DAAMPVAARKRGIRVVGEIYPDLSYAPDGALVLQRAKHVTDTEFAAAQVRRYVETGKVLANDGSLLALDAESLCIHGDGPNATEVGAAVRAALAEIGCRIAPV 513
PEDAYAY VYQ GA+QAAL GM+LHH+KPHG+F S++ EA A+AV A+ PM+Y AP D + AA G+RVV E+YPDL YA DG++++QR KH TD E A Q++R + G+VL G L++ AES+C+HGDGPNA EV A+ + E G R++ V
Sbjct: 84 PEDAYAYTVYQVGAVQAALAAEGMELHHVKPHGSFMSMVMYEEATAQAVMSAVKNTCRSPMVYVTAPVRDTELEAAAEAHGVRVVQEVYPDLEYADDGSVIVQRRKHETDIEKAQDQLKRVLNDGEVLTVTGKRLSVQAESVCVHGDGPNALEVAQALLDVVGESGRRVSAV 255
BLAST of mRNA_P-wetherbeei_contig19735.1.1 vs. uniprot
Match: A0A1G6A8L8_9HYPH (UPF0271 protein n=1 Tax=Bauldia litoralis TaxID=665467 RepID=A0A1G6A8L8_9HYPH) HSP 1 Score: 164 bits (414), Expect = 2.770e-47 Identity = 85/166 (51.20%), Postives = 114/166 (68.67%), Query Frame = 1
Query: 1 PEDAYAYVVYQTGALQAALRVHGMKLHHIKPHGAFYSVLRTNEALAEAVADAIVAIADQPMLYWPAPTDA-AMPVAARKRGIRVVGEIYPDLSYAPDGALVLQRAKHVTDTEFAAAQVRRYVETGKVLANDGSLLALDAESLCIHGDGPNATEVGAAVRAALAEIG 495
P +AYA VVYQ GAL+ L GM LHH+KPHGA Y +L + LA AVA+AI P+LYWPAP + A+P AA K GI VVGE+Y DLSY+ + L+++R K V D + A+++RRY++ G+V++ G + LDA+++CIHGDGPNA E+ VRA L E G
Sbjct: 82 PAEAYAAVVYQVGALKGFLAPLGMTLHHVKPHGALYGMLNDQDDLAAAVAEAIRDTCPSPLLYWPAPVERHALPRAAAKLGIPVVGEVYFDLSYSDEANLMVERKKSVKDLDDVASRLRRYLDKGEVVSVSGKAIPLDAQTICIHGDGPNAVEIAQRVRAVLEEDG 247
BLAST of mRNA_P-wetherbeei_contig19735.1.1 vs. uniprot
Match: UPI0003F66183 (LamB/YcsF family protein n=1 Tax=Pseudonocardia spinosispora TaxID=103441 RepID=UPI0003F66183) HSP 1 Score: 160 bits (404), Expect = 7.510e-46 Identity = 83/172 (48.26%), Postives = 110/172 (63.95%), Query Frame = 1
Query: 1 PEDAYAYVVYQTGALQAALRVHGMKLHHIKPHGAFYSVLRTNEALAEAVADAIVAIADQPMLYWPAPTD-AAMPVAARKRGIRVVGEIYPDLSYAPDGALVLQRAKHVTDTEFAAAQVRRYVETGKVLANDGSLLALDAESLCIHGDGPNATEVGAAVRAALAEIGCRIAPV 513
PE+ A + YQ GAL L M LHH+KPHGAFY+ LR NE A A A+ IA + ++YWPAP AA G +V+ EIYPDLSY+P+G L++QR K TD FA++QV+R++ G V A DG+ + +A S+CIH DGPNA +V VRAA+ E+G IA +
Sbjct: 87 PEEVAAIITYQVGALTGFLTARNMPLHHVKPHGAFYAYLRDNETAGAAAAAAVHRIAPETLVYWPAPAQGAAFCEELGALGHQVITEIYPDLSYSPEGKLIIQRRKLKTDLAFASSQVKRFLTEGVVAAEDGTPIRHEASSVCIHSDGPNAVDVAHTVRAAITEVGSSIAAI 258
BLAST of mRNA_P-wetherbeei_contig19735.1.1 vs. uniprot
Match: A0A2E9M8Z4_9CHLR (Uncharacterized protein n=1 Tax=Dehalococcoidales bacterium TaxID=2026733 RepID=A0A2E9M8Z4_9CHLR) HSP 1 Score: 155 bits (393), Expect = 4.330e-44 Identity = 79/172 (45.93%), Postives = 107/172 (62.21%), Query Frame = 1
Query: 1 PEDAYAYVVYQTGALQAALRVHGMKLHHIKPHGAFYSVLRTNEALAEAVADAIVAIADQPMLYWPAPTDA-AMPVAARKRGIRVVGEIYPDLSYAPDGALVLQRAKHVTDTEFAAAQVRRYVETGKVLANDGSLLALDAESLCIHGDGPNATEVGAAVRAALAEIGCRIAPV 513
PE+AYAY++YQ GAL+A L H M LHHIKPHGA Y +L + LA V AI + QP +YWP P D +P AR GI VV E+Y D Y DG L++ R + D + + +VR ++ + +V+ D L +DA S+C+HGDGPNA E+ AA++ LAE CR+ V
Sbjct: 94 PEEAYAYILYQVGALRAILNSHNMTLHHIKPHGALYMMLNDDVDLARPVVRAIQELCPQPRMYWPGPVDGLVLPELARDAGIEVVSEVYFDREYDNDGRLIVPREQSAIDLDTISERVRIFLHSNEVITIDNDRLKIDARSICVHGDGPNARELLAAIKVVLAEEECRVEAV 265
BLAST of mRNA_P-wetherbeei_contig19735.1.1 vs. uniprot
Match: A0A2S6R3D6_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium MarineAlpha10_Bin2 TaxID=2013104 RepID=A0A2S6R3D6_9PROT) HSP 1 Score: 154 bits (390), Expect = 1.100e-43 Identity = 79/173 (45.66%), Postives = 115/173 (66.47%), Query Frame = 1
Query: 1 PEDAYAYVVYQTGALQAALRVHGMKLHHIKPHGAFYSVLRTNEALAEAVADAIVAIADQPMLYWPAPTDA-AMPVAARKRGIRVVGEIYPDLSYAPDGALVLQRAKHVTDTEFAAAQVRRYVETGKVLANDGSLLALDAESLCIHGDGPNATEVGAAVRAALAEIGCRIAPVM 516
PE+ YA +YQ GAL A LR HGM+LHHIKPHGA YS+L +E L+EA A A++ + QPM+Y+PAP + ++ A GI VV E+Y DLSY +G LVL+RA D + ++ R++E G+V++ +G +A+ A S+C+HGDGPNA ++ A+ LA +AP++
Sbjct: 82 PEEVYADTLYQAGALSAVLRAHGMELHHIKPHGALYSMLSVSEPLSEAFARAVIEVCPQPMIYYPAPAEKHSVTRIAADMGIDVVPELYFDLSYDDEGGLVLKRANEGADLDDTKQRLARFLEHGEVVSVNGKAVAMTARSICLHGDGPNAVDLARAIGDGLAAADYTLAPLV 254
BLAST of mRNA_P-wetherbeei_contig19735.1.1 vs. uniprot
Match: A0A2E8QZU6_9PROT (Uncharacterized protein (Fragment) n=2 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E8QZU6_9PROT) HSP 1 Score: 152 bits (383), Expect = 1.530e-42 Identity = 78/159 (49.06%), Postives = 109/159 (68.55%), Query Frame = 1
Query: 1 PEDAYAYVVYQTGALQAALRVHGMKLHHIKPHGAFYSVLRTNEALAEAVADAIVAIADQPMLYWPAPTD--AAMPVAARKRGIRVVGEIYPDLSYAPDGALVLQRAKHVTDTEFAAAQVRRYVETGKVLANDGSLLALDAESLCIHGDGPNATEVGAAV 471
PE+ YA +YQ GAL A L H M+LHH+KPHGA YS+L +E LAEA A++ + +PM+Y+PAP + AA +AA KRGI VV E+Y DLSY +G LVL+RA D E ++ ++E G+VL+ +G+ +AL+A S+C+HGDGPNA ++ V
Sbjct: 82 PEEVYADTLYQVGALTAVLNAHDMELHHVKPHGALYSMLSKSEPLAEAFVQAVIELCPRPMIYYPAPAERHAATRIAA-KRGIDVVSELYFDLSYDDEGGLVLKRANEGADLEDTKRRLAHFLEKGEVLSVNGNPVALEARSVCLHGDGPNAVDLARTV 239
BLAST of mRNA_P-wetherbeei_contig19735.1.1 vs. uniprot
Match: UPI001C00718A (5-oxoprolinase subunit PxpA n=1 Tax=Nocardioides sp. LMS-CY TaxID=2840457 RepID=UPI001C00718A) HSP 1 Score: 149 bits (377), Expect = 9.850e-42 Identity = 76/153 (49.67%), Postives = 104/153 (67.97%), Query Frame = 1
Query: 4 EDAYAYVVYQTGALQAALRVHGMKLHHIKPHGAFYSVLRTNEALAEAVADAIVAIADQPMLYWPAPT-DAAMPVAARKRGIRVVGEIYPDLSYAPDGALVLQRAKHVTDTEFAAAQVRRYVETGKVLANDGSLLALDAESLCIHGDGPNATEV 459
+DAYA VVYQ GA+QAALR G LHH+KPHG S+ ++ +A+AV AI + D P++Y +PT A+ AAR G+ VV E+YPDL Y+ DGA+++QR K T A AQ+RR++ +G V + +G + L+AESLC+HGD PNA EV
Sbjct: 88 DDAYALVVYQVGAVQAALRAQGASLHHVKPHGTLMSMTMYDDHIADAVLGAIADVCDAPLVYATSPTAGTALERAARSHGVAVVREVYPDLEYSDDGAVIVQRRKLATHVPTAQAQLRRFLRSGVVRSVNGIEIPLEAESLCVHGDSPNALEV 240 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19735.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig19735.1.1 >prot_P-wetherbeei_contig19735.1.1 ID=prot_P-wetherbeei_contig19735.1.1|Name=mRNA_P-wetherbeei_contig19735.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=174bp PEDAYAYVVYQTGALQAALRVHGMKLHHIKPHGAFYSVLRTNEALAEAVAback to top mRNA from alignment at P-wetherbeei_contig19735:3..524+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig19735.1.1 ID=mRNA_P-wetherbeei_contig19735.1.1|Name=mRNA_P-wetherbeei_contig19735.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=522bp|location=Sequence derived from alignment at P-wetherbeei_contig19735:3..524+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig19735:3..524+ >mRNA_P-wetherbeei_contig19735.1.1 ID=mRNA_P-wetherbeei_contig19735.1.1|Name=mRNA_P-wetherbeei_contig19735.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=522bp|location=Sequence derived from alignment at P-wetherbeei_contig19735:3..524+ (Phaeothamnion wetherbeei SAG_119_79)back to top |