mRNA_P-wetherbeei_contig19728.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig19728.1.1 vs. uniprot
Match: A0A7Y4XGJ2_HYPSQ (Recombinase family protein n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A7Y4XGJ2_HYPSQ) HSP 1 Score: 213 bits (543), Expect = 3.080e-64 Identity = 105/142 (73.94%), Postives = 125/142 (88.03%), Query Frame = 1
Query: 1 MRAAIYARFSSDLQDERSITDQIALARRYIETRGLTLIQIYQDAAISGASTMNRPGLQNLLADALVGRFNIIVTESLDRLSRGQADIAALYERLTFLGIRIETLADGAVSEIHIGLKGTMAALFLKDLAQKTRRGQVGRKRA 426
M AAIYARFSSDLQD RSITDQ+A+AR+Y +TRGL I +Y+DAAISGAS +NRPGLQ L++DA GR +++TESLDRLSR QADIAALY+RL FLG+ IETLADG V+E+H+GLKGTM+ALFLKDLAQKTRRGQ+GR +A
Sbjct: 1 MLAAIYARFSSDLQDNRSITDQVAMARKYADTRGLKQIAVYEDAAISGASVINRPGLQRLMSDAAAGRIQVLITESLDRLSRNQADIAALYQRLDFLGVHIETLADGLVNEMHVGLKGTMSALFLKDLAQKTRRGQMGRVKA 142
BLAST of mRNA_P-wetherbeei_contig19728.1.1 vs. uniprot
Match: UPI000B4C088D (recombinase family protein n=1 Tax=Rhodomicrobium TaxID=1068 RepID=UPI000B4C088D) HSP 1 Score: 213 bits (542), Expect = 5.480e-64 Identity = 105/142 (73.94%), Postives = 124/142 (87.32%), Query Frame = 1
Query: 1 MRAAIYARFSSDLQDERSITDQIALARRYIETRGLTLIQIYQDAAISGASTMNRPGLQNLLADALVGRFNIIVTESLDRLSRGQADIAALYERLTFLGIRIETLADGAVSEIHIGLKGTMAALFLKDLAQKTRRGQVGRKRA 426
M AAIYARFSSDLQD RS+TDQI+LA+ Y R L ++ IY+DAA+SGA+ +NRPG+Q LL DA GRF++++TES+DRLSRGQADIA LYERLTF G+RIETLADG +SEIHIGLKGTMAALFLKDLAQKTRRGQ+GR +A
Sbjct: 1 MHAAIYARFSSDLQDARSLTDQISLAKNYASARQLPVVSIYEDAALSGATIINRPGMQQLLEDAAAGRFDLLITESIDRLSRGQADIAWLYERLTFFGVRIETLADGQISEIHIGLKGTMAALFLKDLAQKTRRGQIGRVKA 142
BLAST of mRNA_P-wetherbeei_contig19728.1.1 vs. uniprot
Match: UPI001FD9E09E (recombinase family protein n=1 Tax=Bradyrhizobium pachyrhizi TaxID=280333 RepID=UPI001FD9E09E) HSP 1 Score: 162 bits (411), Expect = 2.690e-48 Identity = 77/138 (55.80%), Postives = 103/138 (74.64%), Query Frame = 1
Query: 1 MRAAIYARFSSDLQDERSITDQIALARRYIETRGLTLIQIYQDAAISGASTMNRPGLQNLLADALVGRFNIIVTESLDRLSRGQADIAALYERLTFLGIRIETLADGAVSEIHIGLKGTMAALFLKDLAQKTRRGQVG 414
M+AAIYARFSSD Q +RSI DQ+AL R E GL+++ +Y D A+SGAST+NR G Q L+ DA +F+++V E+LDR+SR Q D+A +++RL F G+ I T DG +IHIG+KG + +L+LKDLAQKTRRGQ G
Sbjct: 39 MKAAIYARFSSDKQTDRSIEDQVALCRAICEREGLSIVGVYDDRAVSGASTLNRIGWQRLMRDAKAAKFDVVVAEALDRISRDQEDLAGIHKRLRFAGVEIRTAQDGIAGDIHIGVKGLLGSLYLKDLAQKTRRGQAG 176
BLAST of mRNA_P-wetherbeei_contig19728.1.1 vs. uniprot
Match: UPI001FFA4CA1 (recombinase family protein n=1 Tax=Bradyrhizobium sp. 30 TaxID=2782669 RepID=UPI001FFA4CA1) HSP 1 Score: 162 bits (411), Expect = 3.770e-48 Identity = 79/138 (57.25%), Postives = 101/138 (73.19%), Query Frame = 1
Query: 1 MRAAIYARFSSDLQDERSITDQIALARRYIETRGLTLIQIYQDAAISGASTMNRPGLQNLLADALVGRFNIIVTESLDRLSRGQADIAALYERLTFLGIRIETLADGAVSEIHIGLKGTMAALFLKDLAQKTRRGQVG 414
M+AAIYARFSSD Q +RSI DQ+AL R E GL + +Y D AISGAST+NR G Q L+ DA G+F ++V E+LDR+SR Q D+A +++RL F G+ I T DG +IHIG+KG + +L+LKDLAQKTRRGQ G
Sbjct: 1 MKAAIYARFSSDKQTDRSIEDQVALCRTICEREGLIVTAVYDDRAISGASTLNRLGWQRLMRDAKAGKFKVVVAEALDRISRDQEDLAGIHKRLQFAGVEIRTAQDGIAGDIHIGVKGLLGSLYLKDLAQKTRRGQAG 138
BLAST of mRNA_P-wetherbeei_contig19728.1.1 vs. uniprot
Match: A0A849FTJ2_9RHOB (Recombinase family protein (Fragment) n=1 Tax=Litoreibacter sp. TaxID=1969459 RepID=A0A849FTJ2_9RHOB) HSP 1 Score: 160 bits (404), Expect = 4.330e-47 Identity = 82/139 (58.99%), Postives = 104/139 (74.82%), Query Frame = 1
Query: 1 MRAAIYARFSSDLQDERSITDQIALARRYIETRGLTLIQIYQDAAISGASTMNRPGLQNLLADALVGRFNIIVTESLDRLSRGQADIAALYERLTFLGIRIETLADGAVSEIHIGLKGTMAALFLKDLAQKTRRGQVGR 417
M+A IYAR+S+DLQ+ SI DQ+ R I G T++++Y DAAISG S R GLQ LL DA + RF+ +V+E+LDRLSR Q DIA +Y+RLT+ + + TLA+G V+E+HIGLKGTM ALFLKDLAQKTRRG GR
Sbjct: 1 MKAVIYARYSTDLQNPASIADQVRSCRERIIAEGGTVVEVYSDAAISGGSMSARDGLQALLEDARLSRFDTVVSEALDRLSRDQEDIAGIYKRLTYADVTLTTLAEGEVNELHIGLKGTMNALFLKDLAQKTRRGLRGR 139
BLAST of mRNA_P-wetherbeei_contig19728.1.1 vs. uniprot
Match: A0A3D2F964_9RHOB (Resolvase (Fragment) n=1 Tax=Sulfitobacter sp. TaxID=1903071 RepID=A0A3D2F964_9RHOB) HSP 1 Score: 163 bits (413), Expect = 4.360e-47 Identity = 81/139 (58.27%), Postives = 110/139 (79.14%), Query Frame = 1
Query: 1 MRAAIYARFSSDLQDERSITDQIALARRYIETRGLTLIQIYQDAAISGASTMNRPGLQNLLADALVGRFNIIVTESLDRLSRGQADIAALYERLTFLGIRIETLADGAVSEIHIGLKGTMAALFLKDLAQKTRRGQVGR 417
+RAA+YARFS+DLQ + SI DQ+ R + +G+ ++++Y D AISGAS M R G+Q +L DA VGRF+I+V+E++DRLSR Q+DIAA++ER F GI IETL++G +SE+HIG+KGTM A+FLKDL KTRRG +GR
Sbjct: 5 LRAALYARFSTDLQRDASIEDQLRSCRAFATKQGIEVVEVYSDRAISGASLM-RSGMQKMLRDAQVGRFDIVVSEAMDRLSRSQSDIAAIFERFQFRGIMIETLSEGLLSELHIGMKGTMNAIFLKDLGIKTRRGLMGR 142
BLAST of mRNA_P-wetherbeei_contig19728.1.1 vs. uniprot
Match: UPI001FCCB275 (recombinase family protein n=1 Tax=Paracoccus versutus TaxID=34007 RepID=UPI001FCCB275) HSP 1 Score: 161 bits (407), Expect = 1.370e-46 Identity = 85/139 (61.15%), Postives = 103/139 (74.10%), Query Frame = 1
Query: 1 MRAAIYARFSSDLQDERSITDQIALARRYIETRGLTLIQIYQDAAISGASTMNRPGLQNLLADALVGRFNIIVTESLDRLSRGQADIAALYERLTFLGIRIETLADGAVSEIHIGLKGTMAALFLKDLAQKTRRGQVGR 417
+RA IYAR+SSDLQ SI DQI L R G ++ Y+DAA SGAS M RPG+Q L DA RF+++++E+LDRLSR QADIAALY+ LTF G+ IETLA+G + E+HIGLKGTM ALF+KDLA KTRRG GR
Sbjct: 3 LRAVIYARYSSDLQSASSIEDQIRLCRERAARAGWQIVGSYEDAATSGASLM-RPGIQRLQQDARERRFDVVISEALDRLSRNQADIAALYQNLTFAGVAIETLAEGRIDEMHIGLKGTMNALFIKDLAAKTRRGLRGR 140
BLAST of mRNA_P-wetherbeei_contig19728.1.1 vs. uniprot
Match: UPI000AA51525 (recombinase family protein n=1 Tax=Agrobacterium vitis TaxID=373 RepID=UPI000AA51525) HSP 1 Score: 159 bits (403), Expect = 1.410e-46 Identity = 83/139 (59.71%), Postives = 104/139 (74.82%), Query Frame = 1
Query: 1 MRAAIYARFSSDLQDERSITDQIALARRYIETRGLTLIQIYQDAAISGASTMNRPGLQNLLADALVGRFNIIVTESLDRLSRGQADIAALYERLTFLGIRIETLADGAVSEIHIGLKGTMAALFLKDLAQKTRRGQVGR 417
M+ A+YAR+SSD Q + SI DQ+ + R E G T++ Y D AISGAS + RPG+Q L+AD L RF++I+TESLDRLSR Q DIA LY+R+ F G+ I TL++G VSE+HIGLKGTM AL+LKDLA KTRRG GR
Sbjct: 1 MKVALYARYSSDNQRDASIEDQLRICRTRAEREGWTIVDSYTDRAISGASLI-RPGIQELIADGLKRRFDVILTESLDRLSRDQEDIAGLYKRMRFAGVSIVTLSEGEVSELHIGLKGTMGALYLKDLADKTRRGLRGR 138
BLAST of mRNA_P-wetherbeei_contig19728.1.1 vs. uniprot
Match: UPI000B1A71FE (recombinase family protein n=1 Tax=Mesorhizobium sp. YR577 TaxID=1884373 RepID=UPI000B1A71FE) HSP 1 Score: 159 bits (401), Expect = 1.620e-46 Identity = 81/138 (58.70%), Postives = 101/138 (73.19%), Query Frame = 1
Query: 4 RAAIYARFSSDLQDERSITDQIALARRYIETRGLTLIQIYQDAAISGASTMNRPGLQNLLADALVGRFNIIVTESLDRLSRGQADIAALYERLTFLGIRIETLADGAVSEIHIGLKGTMAALFLKDLAQKTRRGQVGR 417
R A+YAR+SSD Q E SI DQ L R + + Y+DAAISGAST+ RPG+Q L+ DA G FNI++ E+LDR+SR QAD+A LY++L F G+ I TLA+G +SE+H+GLKGTM ALFLKDLA KTRRG GR
Sbjct: 3 RVALYARYSSDNQSEASIEDQFRLCRDHARRERWETVGFYEDAAISGASTILRPGIQRLMRDAQHGEFNILLAEALDRISRDQADVAPLYKQLKFAGVGIVTLAEGEISELHVGLKGTMNALFLKDLAMKTRRGLRGR 140
BLAST of mRNA_P-wetherbeei_contig19728.1.1 vs. uniprot
Match: UPI001BC09671 (Recombinase family protein n=1 Tax=Roseovarius sp. TaxID=1486281 RepID=UPI001BC09671) HSP 1 Score: 167 bits (423), Expect = 2.010e-46 Identity = 86/139 (61.87%), Postives = 105/139 (75.54%), Query Frame = 1
Query: 1 MRAAIYARFSSDLQDERSITDQIALARRYIETRGLTLIQIYQDAAISGASTMNRPGLQNLLADALVGRFNIIVTESLDRLSRGQADIAALYERLTFLGIRIETLADGAVSEIHIGLKGTMAALFLKDLAQKTRRGQVGR 417
MRAAIYAR+S+DLQ+ SI DQI + + G T +QIY DAAISG S RPGLQ LLADA GRF+ ++ E+LDR+SR Q DIA +Y+RL + +++ TLA+G VSE+HIGLKGTM ALFLKDLAQKTRRG GR
Sbjct: 1 MRAAIYARYSTDLQNPASIEDQIRICEDQVRATGGTTVQIYTDAAISGGSMKTRPGLQALLADASQGRFDTVIAEALDRVSRDQEDIAGIYKRLQYADVQLVTLAEGVVSELHIGLKGTMNALFLKDLAQKTRRGLRGR 139 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19728.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig19728.1.1 >prot_P-wetherbeei_contig19728.1.1 ID=prot_P-wetherbeei_contig19728.1.1|Name=mRNA_P-wetherbeei_contig19728.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=151bp MRAAIYARFSSDLQDERSITDQIALARRYIETRGLTLIQIYQDAAISGASback to top mRNA from alignment at P-wetherbeei_contig19728:786..1238+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig19728.1.1 ID=mRNA_P-wetherbeei_contig19728.1.1|Name=mRNA_P-wetherbeei_contig19728.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=453bp|location=Sequence derived from alignment at P-wetherbeei_contig19728:786..1238+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig19728:786..1238+ >mRNA_P-wetherbeei_contig19728.1.1 ID=mRNA_P-wetherbeei_contig19728.1.1|Name=mRNA_P-wetherbeei_contig19728.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=453bp|location=Sequence derived from alignment at P-wetherbeei_contig19728:786..1238+ (Phaeothamnion wetherbeei SAG_119_79)back to top |