mRNA_P-wetherbeei_contig19300.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig19300.2.1 vs. uniprot
Match: A0A6I3EX71_9ACTN (Urease accessory protein UreF n=2 Tax=root TaxID=1 RepID=A0A6I3EX71_9ACTN) HSP 1 Score: 149 bits (377), Expect = 4.360e-43 Identity = 82/122 (67.21%), Postives = 94/122 (77.05%), Query Frame = 1
Query: 1 AERAWPSAAYAALRSVQPDGPMQPLVLGATAAAAGLDPEEAALCSLHHLLGAITTAAVRLIGLDPFSVQALAASLAPRLDALATDAALAARLPVSELPSTTSLLADALAEHHATWEVRLFAS 366
AERAWPS LRS+ +GPMQ + LGATAAAAGL P +AALCSLHHL+GA+TTAAVRL+GLDPF VQA+AA+ P L+ LA +A A P LP+ SLLAD LAEHHATWEVRLFAS
Sbjct: 100 AERAWPSLPARELRSLHWEGPMQSVALGATAAAAGLTPADAALCSLHHLVGAVTTAAVRLLGLDPFDVQAIAANRTPLLERLAAEATARALGPADALPANNSLLADILAEHHATWEVRLFAS 221
BLAST of mRNA_P-wetherbeei_contig19300.2.1 vs. uniprot
Match: UPI000493E09C (urease accessory protein UreF n=1 Tax=Streptomyces xiaopingdaonensis TaxID=1565415 RepID=UPI000493E09C) HSP 1 Score: 111 bits (277), Expect = 5.440e-28 Identity = 69/122 (56.56%), Postives = 79/122 (64.75%), Query Frame = 1
Query: 1 AERAWPSAAYAALRSVQPDGPMQPLVLGATAAAAGLDPEEAALCSLHHLLGAITTAAVRLIGLDPFSVQALAASLAPRLDALATDAALAARLPVSELPSTTSLLADALAEHHATWEVRLFAS 366
A A P AL + +GP QPLVLGATA A GL P AA +LH TAAVRL+GLDPF+V AL A LAP+LDAL+ AA P SELP++ + L D AEHHATWEVRLFAS
Sbjct: 103 ARAASPDPLLDALTTAWSEGPHQPLVLGATAQAFGLTPHAAAAAALHEAATGPATAAVRLLGLDPFAVHALLAHLAPQLDALSHQAAALVDEPPSELPASGAPLLDISAEHHATWEVRLFAS 224
BLAST of mRNA_P-wetherbeei_contig19300.2.1 vs. uniprot
Match: UPI001951D22F (urease accessory protein UreF n=4 Tax=Micromonospora TaxID=1873 RepID=UPI001951D22F) HSP 1 Score: 107 bits (268), Expect = 1.300e-26 Identity = 66/120 (55.00%), Postives = 78/120 (65.00%), Query Frame = 1
Query: 7 RAWPSAAYAALRSVQPDGPMQPLVLGATAAAAGLDPEEAALCSLHHLLGAITTAAVRLIGLDPFSVQALAASLAPRLDALATDAALAARLPVSELPSTTSLLADALAEHHATWEVRLFAS 366
R WP+A + L +V PDGP QPLVLG AAAGLDP + A + H + +AAVRL+GLDP+ VQAL LA DA+A AA AA P LP+ + LAD AE HATWEVRLFAS
Sbjct: 109 RIWPAATFDDLPTV-PDGPHQPLVLGLVGAAAGLDPGQVATVAAHATVTGSASAAVRLLGLDPYQVQALLVRLAGACDAVAARAARAAEEPPERLPAAAAPLADIHAEAHATWEVRLFAS 227
BLAST of mRNA_P-wetherbeei_contig19300.2.1 vs. uniprot
Match: UPI0017B3A250 (Urease accessory protein UreF n=1 Tax=Hamadaea sp. TaxID=2024425 RepID=UPI0017B3A250) HSP 1 Score: 107 bits (267), Expect = 1.520e-26 Identity = 67/119 (56.30%), Postives = 82/119 (68.91%), Query Frame = 1
Query: 13 WPSAAYAALRSVQPDGPMQPLVLGATAAAAGLDPEEAALCSLHHLLGAITTAAVRLIGLDPFSVQALAASLAPRLDALATDAA-LAARLPVSELPSTTSLLADALAEHHATWEVRLFAS 366
WPS Y L PDG QP+ LG TAAAAGLDP +AAL + + +L +AAVRL+GLDP+ VQAL + LA D ++ AA +AA P S+LP+TT+ LAD AE HATWEVRLFAS
Sbjct: 102 WPSPLYDQLPP-HPDGCHQPIALGLTAAAAGLDPHQAALVAAYAVLTGPASAAVRLLGLDPYQVQALLSRLAATCDEISAGAAAVAATAPPSDLPATTAPLADIHAETHATWEVRLFAS 219
BLAST of mRNA_P-wetherbeei_contig19300.2.1 vs. uniprot
Match: UPI0004CB2D5C (urease accessory protein UreF n=2 Tax=Streptomyces TaxID=1883 RepID=UPI0004CB2D5C) HSP 1 Score: 105 bits (263), Expect = 6.310e-26 Identity = 61/122 (50.00%), Postives = 76/122 (62.30%), Query Frame = 1
Query: 1 AERAWPSAAYAALRSVQPDGPMQPLVLGATAAAAGLDPEEAALCSLHHLLGAITTAAVRLIGLDPFSVQALAASLAPRLDALATDAALAARLPVSELPSTTSLLADALAEHHATWEVRLFAS 366
A WPSA AL ++ P G QP+VLG TA AAGLD E+AA C + +G TA VRL+GLDP+ A+ A L P +D +A AA AAR + LP+ ++ L D AE HA W VRLFAS
Sbjct: 100 ARATWPSARLDALAAMYPRGAHQPVVLGTTALAAGLDAEDAAYCVAYETVGGPATAVVRLLGLDPYQATAVLARLVPEMDQVAERAAAAARQGIDALPAASAPLLDLTAEQHAAWPVRLFAS 221
BLAST of mRNA_P-wetherbeei_contig19300.2.1 vs. uniprot
Match: UPI001991F038 (urease accessory protein UreF n=1 Tax=Streptomyces mashuensis TaxID=33904 RepID=UPI001991F038) HSP 1 Score: 106 bits (264), Expect = 6.450e-26 Identity = 67/126 (53.17%), Postives = 79/126 (62.70%), Query Frame = 1
Query: 1 AERAWPSAAYAALRSVQPDGPMQPLVLGATAAAAGLDPEEAALCSLHHLLGAITTAAVRLIGLDPFSVQALAASLAPRLDALATDAALAARLPVSE----LPSTTSLLADALAEHHATWEVRLFAS 366
A AWPSAA AL + +P G QP+VLG TA AAGL P +AA + + + TAAVRL+GLDPF A+ A LAP LD +A AA AAR V E LPS ++ L D AE HA W VRLFAS
Sbjct: 112 ARAAWPSAALDALAAARPRGAHQPVVLGLTARAAGLGPADAAYAAAYECVSGPATAAVRLLGLDPFDATAVLARLAPELDQVAARAARAARRAVDEGPDALPSASAPLLDITAEQHAAWPVRLFAS 237
BLAST of mRNA_P-wetherbeei_contig19300.2.1 vs. uniprot
Match: A0A3N6FLQ8_9ACTN (Urease accessory protein UreF n=10 Tax=Streptomyces TaxID=1883 RepID=A0A3N6FLQ8_9ACTN) HSP 1 Score: 105 bits (262), Expect = 8.910e-26 Identity = 62/122 (50.82%), Postives = 77/122 (63.11%), Query Frame = 1
Query: 1 AERAWPSAAYAALRSVQPDGPMQPLVLGATAAAAGLDPEEAALCSLHHLLGAITTAAVRLIGLDPFSVQALAASLAPRLDALATDAALAARLPVSELPSTTSLLADALAEHHATWEVRLFAS 366
A WPS AAL + +P G QP+VLG TA AAGL+PE+AA C + + TA VRL+ LDPF A+ A LAP LD +A +AA AAR + LP+ ++ L D AE HA W VRLFAS
Sbjct: 100 ARSTWPSPELAALAAARPRGAHQPVVLGLTARAAGLEPEDAAHCVAYEAVSGPATAVVRLLSLDPFEATAVLARLAPALDRVAEEAAAAARDGIDALPAASAPLLDITAEAHAAWPVRLFAS 221
BLAST of mRNA_P-wetherbeei_contig19300.2.1 vs. uniprot
Match: A0A8J3MJC1_9ACTN (Urease accessory protein UreF n=2 Tax=unclassified Catellatospora TaxID=2645785 RepID=A0A8J3MJC1_9ACTN) HSP 1 Score: 105 bits (261), Expect = 1.260e-25 Identity = 65/118 (55.08%), Postives = 77/118 (65.25%), Query Frame = 1
Query: 13 WPSAAYAALRSVQPDGPMQPLVLGATAAAAGLDPEEAALCSLHHLLGAITTAAVRLIGLDPFSVQALAASLAPRLDALATDAALAARLPVSELPSTTSLLADALAEHHATWEVRLFAS 366
WPS YA L PDGP Q + LG AAAAGL E+AA ++ H + +AAVRL+GLDP+ VQ A LAP DA+A AA A P +ELPS ++ LAD AE HATWEVRLFAS
Sbjct: 105 WPSELYATLPP-HPDGPHQAITLGVVAAAAGLSAEQAAQIAVFHTVTGPASAAVRLLGLDPYQVQRQLALLAPVCDAVAAAAAALAHKPPAELPSHSAPLADISAELHATWEVRLFAS 221
BLAST of mRNA_P-wetherbeei_contig19300.2.1 vs. uniprot
Match: UPI0011EBCDFB (urease accessory protein UreF n=2 Tax=Streptomyces TaxID=1883 RepID=UPI0011EBCDFB) HSP 1 Score: 104 bits (259), Expect = 2.680e-25 Identity = 63/122 (51.64%), Postives = 75/122 (61.48%), Query Frame = 1
Query: 1 AERAWPSAAYAALRSVQPDGPMQPLVLGATAAAAGLDPEEAALCSLHHLLGAITTAAVRLIGLDPFSVQALAASLAPRLDALATDAALAARLPVSELPSTTSLLADALAEHHATWEVRLFAS 366
A WPS AL P G QP+VLGATA AAGL PEEAA C+++ + TAAVRL+ LDPF A+ A LAP +D +A A AAR V LP+ ++ L D AE HA W VRLFAS
Sbjct: 103 ARATWPSPELDALARAYPRGAHQPVVLGATARAAGLGPEEAAHCAVYETVSGPATAAVRLLSLDPFQATAVLARLAPDMDDVAARATAAAREGVDALPAASAPLLDITAEQHAAWPVRLFAS 224
BLAST of mRNA_P-wetherbeei_contig19300.2.1 vs. uniprot
Match: A0A6B2WWT3_9ACTN (Urease accessory protein UreF (Fragment) n=2 Tax=unclassified Streptomyces TaxID=2593676 RepID=A0A6B2WWT3_9ACTN) HSP 1 Score: 101 bits (251), Expect = 3.360e-25 Identity = 65/123 (52.85%), Postives = 80/123 (65.04%), Query Frame = 1
Query: 10 AWPSAAYAALRSVQPDGPMQPLVLGATAAAAGLDPEEAALCSLHHLLGAITTAAVRLIGLDPFSVQALAASLAPRLDALATDAALAARLPVSE----LPSTTSLLADALAEHHATWEVRLFAS 366
AWP+A L + +P G QP+VLG TA AAGL P +AA + + + TTAAVRL+GLDPFSV A+ A LAP LDA+A AALAA +E LP+ ++ L D AE HA W VRLFAS
Sbjct: 3 AWPAAELDRLAAARPRGAHQPIVLGVTARAAGLTPLDAAHVAAYESVTGPTTAAVRLLGLDPFSVGAVLARLAPELDAVAERAALAAARAATEGLQALPAASAPLLDIHAEQHAAWPVRLFAS 125 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19300.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig19300.2.1 >prot_P-wetherbeei_contig19300.2.1 ID=prot_P-wetherbeei_contig19300.2.1|Name=mRNA_P-wetherbeei_contig19300.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=123bp AERAWPSAAYAALRSVQPDGPMQPLVLGATAAAAGLDPEEAALCSLHHLLback to top mRNA from alignment at P-wetherbeei_contig19300:927..1295- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig19300.2.1 ID=mRNA_P-wetherbeei_contig19300.2.1|Name=mRNA_P-wetherbeei_contig19300.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=369bp|location=Sequence derived from alignment at P-wetherbeei_contig19300:927..1295- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig19300:927..1295- >mRNA_P-wetherbeei_contig19300.2.1 ID=mRNA_P-wetherbeei_contig19300.2.1|Name=mRNA_P-wetherbeei_contig19300.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=369bp|location=Sequence derived from alignment at P-wetherbeei_contig19300:927..1295- (Phaeothamnion wetherbeei SAG_119_79)back to top |