prot_P-wetherbeei_contig19231.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-wetherbeei_contig19231.2.1
Unique Name	prot_P-wetherbeei_contig19231.2.1
Type	polypeptide
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length	112

Homology

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BLAST of mRNA_P-wetherbeei_contig19231.2.1 vs. uniprot
Match: A0A0S8AX70_9PROT (Cytochrome c domain-containing protein n=1 Tax=Betaproteobacteria bacterium SG8_39 TaxID=1703390 RepID=A0A0S8AX70_9PROT)

HSP 1 Score: 142 bits (357), Expect = 1.110e-41
Identity = 75/111 (67.57%), Postives = 90/111 (81.08%), Query Frame = 0

Query:    1 VKHLLTLAAAAAFALGSAGVSAKGNAEAGKAKAAQVCAACHGPDGNKPTGPDFPILAGQLPDYLKKALSDYKTGKRNNAIMKGFAATLSNQEMDDLAAWFASQPSNLVTHR 111
            +K  LT+AA  A AL  A   A G+A AGKAKAAQVCAACHGP+GNKP+ PD PILAGQ PDYL KALSDYK+GKR+N IMKGFAATLS+++++D+AAWF+SQ S L + R
Sbjct:    1 MKRTLTIAALVALALSPA-AWAGGDAAAGKAKAAQVCAACHGPEGNKPSAPDQPILAGQYPDYLVKALSDYKSGKRSNPIMKGFAATLSDKDIEDIAAWFSSQSSGLHSTR 110

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BLAST of mRNA_P-wetherbeei_contig19231.2.1 vs. uniprot
Match: A0A1F4FWF4_9PROT (Cytochrome c domain-containing protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14 TaxID=1797501 RepID=A0A1F4FWF4_9PROT)

HSP 1 Score: 135 bits (341), Expect = 2.860e-39
Identity = 76/111 (68.47%), Postives = 87/111 (78.38%), Query Frame = 0

Query:    1 VKHLLTLAAAAAFALGSAGVSAKGNAEAGKAKAAQVCAACHGPDGNKPTGPDFPILAGQLPDYLKKALSDYKTGKRNNAIMKGFAATLSNQEMDDLAAWFASQPSNLVTHR 111
            ++ LL LAA AA  +  AG+ AKGNAEAGKAKAAQVCAACHG DGNKP+ PD PILAGQ  DYL +AL+DYK G+RNN IMKGFA  LS Q+++DLAAWFASQ S L   R
Sbjct:    1 MRKLLLLAALAAVPV--AGI-AKGNAEAGKAKAAQVCAACHGADGNKPSAPDQPILAGQHYDYLVRALTDYKIGRRNNPIMKGFAGQLSKQDIEDLAAWFASQKSALQYQR 108

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BLAST of mRNA_P-wetherbeei_contig19231.2.1 vs. uniprot
Match: A0A1F4AU27_9PROT (Cytochrome c domain-containing protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_66_14 TaxID=1797490 RepID=A0A1F4AU27_9PROT)

HSP 1 Score: 135 bits (341), Expect = 3.130e-39
Identity = 74/107 (69.16%), Postives = 85/107 (79.44%), Query Frame = 0

Query:    5 LTLAAAAAFALGSAGVSAKGNAEAGKAKAAQVCAACHGPDGNKPTGPDFPILAGQLPDYLKKALSDYKTGKRNNAIMKGFAATLSNQEMDDLAAWFASQPSNLVTHR 111
            +TLAAAAA  L SA  SAKGNAE+GKAKAAQ+CAACHG DG KP+ PD PILAGQ  DYL + L DYK+G R+NAIMKGFAA LS ++++DLAAWFASQ S L   R
Sbjct:    6 ITLAAAAALGLASA-ASAKGNAESGKAKAAQLCAACHGADGAKPSAPDQPILAGQYYDYLVQVLGDYKSGNRSNAIMKGFAAALSKKDIEDLAAWFASQKSALHFQR 111

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BLAST of mRNA_P-wetherbeei_contig19231.2.1 vs. uniprot
Match: A0A537DPG3_9PROT (Cytochrome c n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537DPG3_9PROT)

HSP 1 Score: 136 bits (343), Expect = 2.790e-38
Identity = 66/90 (73.33%), Postives = 74/90 (82.22%), Query Frame = 0

Query:   22 AKGNAEAGKAKAAQVCAACHGPDGNKPTGPDFPILAGQLPDYLKKALSDYKTGKRNNAIMKGFAATLSNQEMDDLAAWFASQPSNLVTHR 111
            A GNAE G+A+AAQVCAACHGPDGN+P+ PD P+LAGQ  DYL KAL DYKTG+RNN IMKGFAA LS Q+MDDLAAWF+SQ S L   R
Sbjct:  120 ASGNAEGGRARAAQVCAACHGPDGNRPSTPDQPVLAGQYADYLAKALHDYKTGRRNNPIMKGFAAQLSRQDMDDLAAWFSSQKSRLHDQR 209

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BLAST of mRNA_P-wetherbeei_contig19231.2.1 vs. uniprot
Match: A0A537CRM8_9PROT (Cytochrome c n=2 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537CRM8_9PROT)

HSP 1 Score: 134 bits (338), Expect = 1.510e-37
Identity = 65/90 (72.22%), Postives = 74/90 (82.22%), Query Frame = 0

Query:   22 AKGNAEAGKAKAAQVCAACHGPDGNKPTGPDFPILAGQLPDYLKKALSDYKTGKRNNAIMKGFAATLSNQEMDDLAAWFASQPSNLVTHR 111
            A+G+AE+GKAK AQVCAACHGPDGN+P  PD P++AGQ  DYL KAL DYKTGKRNN IMKGFAA LS Q+M+DLAAWF+SQ S L   R
Sbjct:  118 ARGDAESGKAKVAQVCAACHGPDGNRPLTPDQPVIAGQYADYLAKALHDYKTGKRNNQIMKGFAAQLSRQDMEDLAAWFSSQKSRLHDQR 207

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BLAST of mRNA_P-wetherbeei_contig19231.2.1 vs. uniprot
Match: A0A1F3Y7X2_9PROT (Cytochrome c domain-containing protein n=1 Tax=Betaproteobacteria bacterium RBG_16_66_20 TaxID=1797479 RepID=A0A1F3Y7X2_9PROT)

HSP 1 Score: 130 bits (328), Expect = 2.890e-37
Identity = 73/110 (66.36%), Postives = 82/110 (74.55%), Query Frame = 0

Query:    2 KHLLTLAAAAAFALGSAGVSAKGNAEAGKAKAAQVCAACHGPDGNKPTGPDFPILAGQLPDYLKKALSDYKTGKRNNAIMKGFAATLSNQEMDDLAAWFASQPSNLVTHR 111
             H L  A  A FA+ +A V AKGNAE GKAKAAQVCAACHG DG KPT PD PILAGQ PDYL KAL+DYK+GKR N IMK FA  LS Q+++D++AWFASQ S L   R
Sbjct:    3 SHALVFALIA-FAVSTA-VEAKGNAEKGKAKAAQVCAACHGADGAKPTAPDQPILAGQYPDYLVKALADYKSGKRANPIMKAFADQLSKQDIEDVSAWFASQKSALHFQR 110

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BLAST of mRNA_P-wetherbeei_contig19231.2.1 vs. uniprot
Match: A0A177R1S7_9PROT (Cytochrome c domain-containing protein n=1 Tax=Betaproteobacteria bacterium SCGC AG-212-J23 TaxID=1799662 RepID=A0A177R1S7_9PROT)

HSP 1 Score: 128 bits (322), Expect = 2.160e-36
Identity = 63/95 (66.32%), Postives = 74/95 (77.89%), Query Frame = 0

Query:   17 SAGVSAKGNAEAGKAKAAQVCAACHGPDGNKPTGPDFPILAGQLPDYLKKALSDYKTGKRNNAIMKGFAATLSNQEMDDLAAWFASQPSNLVTHR 111
            +A   A+GNAE+GKAKAAQVCAACHGPDG+KP+ PD P+LAGQ  DYL +ALSDYK G R N IMKGFA  LS Q+++DLAAWF+ Q S L   R
Sbjct:   13 AASAQARGNAESGKAKAAQVCAACHGPDGSKPSAPDQPVLAGQYYDYLVRALSDYKAGHRTNGIMKGFAGQLSKQDIEDLAAWFSRQKSPLHNQR 107

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BLAST of mRNA_P-wetherbeei_contig19231.2.1 vs. uniprot
Match: A0A521YZU8_9PROT (Cytochrome c n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521YZU8_9PROT)

HSP 1 Score: 126 bits (316), Expect = 1.820e-35
Identity = 63/90 (70.00%), Postives = 74/90 (82.22%), Query Frame = 0

Query:   18 AGVSAKGNAEAGKAKAAQVCAACHGPDGNKPTGPDFPILAGQLPDYLKKALSDYKTGKRNNAIMKGFAATLSNQEMDDLAAWFASQPSNL 107
            A  SAKGNA++GK+KAAQVCAACHG +G KP+ PD PILAGQ  DYL +AL+DYK GKRNN IMKGFA  LS Q+++DLAAWF+SQ S L
Sbjct:   15 AAASAKGNADSGKSKAAQVCAACHGAEGTKPSAPDQPILAGQHYDYLVRALTDYKIGKRNNPIMKGFAGQLSKQDIEDLAAWFSSQRSAL 104

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BLAST of mRNA_P-wetherbeei_contig19231.2.1 vs. uniprot
Match: A0A536SXN0_9PROT (Cytochrome c n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536SXN0_9PROT)

HSP 1 Score: 124 bits (312), Expect = 7.630e-35
Identity = 63/92 (68.48%), Postives = 74/92 (80.43%), Query Frame = 0

Query:   12 AFALGSAGVSAKGNAEAGKAKAAQVCAACHGPDGNKPTGPDFPILAGQLPDYLKKALSDYKTGKRNNAIMKGFAATLSNQEMDDLAAWFASQ 103
            AFA+ +A   A GNA  GK KAAQVCAACHG DGNKP+ PD P+LAGQ  DYL +AL+DYK G+RNNAIMKGFA  LS Q+++DLAAWF+SQ
Sbjct:   10 AFAV-AASADAGGNAARGKNKAAQVCAACHGADGNKPSAPDQPVLAGQYQDYLARALTDYKNGRRNNAIMKGFAGQLSKQDIEDLAAWFSSQ 100

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BLAST of mRNA_P-wetherbeei_contig19231.2.1 vs. uniprot
Match: A0A1F4F946_9PROT (Cytochrome c domain-containing protein (Fragment) n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_67_28 TaxID=1797503 RepID=A0A1F4F946_9PROT)

HSP 1 Score: 122 bits (306), Expect = 3.360e-34
Identity = 62/88 (70.45%), Postives = 70/88 (79.55%), Query Frame = 0

Query:   24 GNAEAGKAKAAQVCAACHGPDGNKPTGPDFPILAGQLPDYLKKALSDYKTGKRNNAIMKGFAATLSNQEMDDLAAWFASQPSNLVTHR 111
            GN E GK KAAQ CAACHG DG KP+ PD PILAGQ  DYL +ALSDYK+GKR+NAIMKGFAA LS ++++DLAAWFASQ S L   R
Sbjct:    1 GNPENGKTKAAQACAACHGADGAKPSAPDQPILAGQHYDYLVQALSDYKSGKRSNAIMKGFAAALSKKDIEDLAAWFASQKSPLHFQR 88

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig19231.2.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig19231.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A0S8AX70_9PROT	1.110e-41	67.57	Cytochrome c domain-containing protein n=1 Tax=Bet...	[more]
A0A1F4FWF4_9PROT	2.860e-39	68.47	Cytochrome c domain-containing protein n=1 Tax=Bet...	[more]
A0A1F4AU27_9PROT	3.130e-39	69.16	Cytochrome c domain-containing protein n=1 Tax=Bet...	[more]
A0A537DPG3_9PROT	2.790e-38	73.33	Cytochrome c n=1 Tax=Betaproteobacteria bacterium ...	[more]
A0A537CRM8_9PROT	1.510e-37	72.22	Cytochrome c n=2 Tax=Betaproteobacteria bacterium ...	[more]
A0A1F3Y7X2_9PROT	2.890e-37	66.36	Cytochrome c domain-containing protein n=1 Tax=Bet...	[more]
A0A177R1S7_9PROT	2.160e-36	66.32	Cytochrome c domain-containing protein n=1 Tax=Bet...	[more]
A0A521YZU8_9PROT	1.820e-35	70.00	Cytochrome c n=1 Tax=Betaproteobacteria bacterium ...	[more]
A0A536SXN0_9PROT	7.630e-35	68.48	Cytochrome c n=1 Tax=Betaproteobacteria bacterium ...	[more]
A0A1F4F946_9PROT	3.360e-34	70.45	Cytochrome c domain-containing protein (Fragment) ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036909	Cytochrome c-like domain superfamily	GENE3D	1.10.760.10		coord: 28..104 e-value: 5.5E-27 score: 96.0
IPR036909	Cytochrome c-like domain superfamily	SUPERFAMILY	46626	Cytochrome c	coord: 22..103
IPR009056	Cytochrome c-like domain	PFAM	PF13442	Cytochrome_CBB3	coord: 25..99 e-value: 2.0E-9 score: 37.6
IPR009056	Cytochrome c-like domain	PROSITE	PS51007	CYTC	coord: 24..104 score: 11.755113
None	No IPR available	PIRSR	PIRSR617512-3	PIRSR617512-3	coord: 23..103 e-value: 0.0057 score: 12.7
None	No IPR available	PIRSR	PIRSR000005-1	PIRSR000005-1	coord: 24..105 e-value: 2.7E-25 score: 87.1
None	No IPR available	PIRSR	PIRSR000025-1	PIRSR000025-1	coord: 23..103 e-value: 5.5E-4 score: 17.7
None	No IPR available	PIRSR	PIRSR617512-2	PIRSR617512-2	coord: 23..103 e-value: 0.0057 score: 12.7
None	No IPR available	PIRSR	PIRSR000005-2	PIRSR000005-2	coord: 24..105 e-value: 2.7E-25 score: 87.1
None	No IPR available	PIRSR	PIRSR000025-2	PIRSR000025-2	coord: 23..103 e-value: 5.5E-4 score: 17.7
None	No IPR available	PIRSR	PIRSR000006-2	PIRSR000006-2	coord: 21..51 e-value: 0.0025 score: 15.1
None	No IPR available	PANTHER	PTHR33751	CBB3-TYPE CYTOCHROME C OXIDASE SUBUNIT FIXP	coord: 3..108
None	No IPR available	PANTHER	PTHR33751:SF9	CYTOCHROME BC1 COMPLEX CYTOCHROME C SUBUNIT	coord: 3..108

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig19231	contig	P-wetherbeei_contig19231:229..564 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig19231.2.1	mRNA_P-wetherbeei_contig19231.2.1	Phaeothamnion wetherbeei SAG_119_79	mRNA	P-wetherbeei_contig19231 229..564 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-wetherbeei_contig19231.2.1 ID=prot_P-wetherbeei_contig19231.2.1|Name=mRNA_P-wetherbeei_contig19231.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=112bp
VKHLLTLAAAAAFALGSAGVSAKGNAEAGKAKAAQVCAACHGPDGNKPTG
PDFPILAGQLPDYLKKALSDYKTGKRNNAIMKGFAATLSNQEMDDLAAWF
ASQPSNLVTHR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036909	Cyt_c-like_dom_sf
IPR009056	Cyt_c-like_dom