mRNA_P-wetherbeei_contig1912.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1912.2.1
Unique NamemRNA_P-wetherbeei_contig1912.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1912.2.1 vs. uniprot
Match: K0SSL7_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SSL7_THAOC)

HSP 1 Score: 149 bits (376), Expect = 1.860e-35
Identity = 150/454 (33.04%), Postives = 203/454 (44.71%), Query Frame = 1
Query:   49 LEARLAVVVASDAVYYRLYYLQVTGLTAPES----PWRVPAPHEYFGLPGLACNVA-AGLSAQEAFFR---------SAPLDALAVELFGGAGGFQLLAPPPSSASATGGPGNAA--ASEADHPLLALWQARWRETCRFFWAAEPGWARQRRPAALAARRRGAQHLL------PEFACHEAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAV-------ARLG--RG-----VVEVGAGMGYWAEVLRRGA----GIEVFAVDAAPPGEALVSNALWIRSKGATYHGDAPAFGPVALGGP-EAAAERPAFALLLCYPPPASDMAAAALRCY--RGG-FVMHVGEWRGLTGDASFETALQREFSLRETVPLPPWGTDASHLTVWERRPGIVPPGTTAGLAAAAALANLPACATCGARARWRCRLARSLDYCGARCCVAHEPTRRAVLAFAML 1278
            +E RLAV+ A D VYYR YY  +T              VP P  YF  P LA +V  AGL +   +           +APLD    ++   + G +            GG GN +   S +++PLLALWQ+R+ ET R  W     ++  +   AL++R R  +          E   HEA A                                       ++LG  RG     +VE GAG GYWA +L++      G+ V   D  PP    VS+    +S+G  YHG+ P F PV      EA  +  +  LLLCYPPP S+MA  AL  Y  RGG  ++H+GEW+GLTG ASFE+ L++   +   V LP WGTDA++LTVW  R      G  A  + AA   ++  C     R   R   AR L YC   C   H   R++ LA  M+
Sbjct:  288 VERRLAVMAACDGVYYRCYYSVLTSRIPDRLGALVATLVPHPPTYFSCPNLAWDVEHAGLDSFRLYLGKCNKFGKSFAAPLDNPTRQMILSSWGLR---------DRLGGVGNISNDQSSSNNPLLALWQSRFIETIRHLWVTR--YSELQSHQALSSRSRSDEKRQMVRSHGSELDRHEAEALKPAMAEWRDSTRDYPANLMAYATPTPDALQAVLESLVSSQLGASRGDRLTSLVEAGAGTGYWAALLQKSLEKNEGLSVVPYDIVPPSGNEVSS----QSQGNEYHGEVPCFTPVRQSAQLEATTDANSACLLLCYPPPESEMAHDALASYLSRGGRTIIHIGEWQGLTGSASFESLLKQSCLVHRVVCLPCWGTDAAYLTVWNARVADSQKGCDASSSPAAGYCSVQGCNCPALR---RSLHARMLQYCSQECFEKHSVQRQSTLALHMV 723          
BLAST of mRNA_P-wetherbeei_contig1912.2.1 vs. uniprot
Match: B8BTG3_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BTG3_THAPS)

HSP 1 Score: 125 bits (314), Expect = 2.580e-27
Identity = 137/450 (30.44%), Postives = 185/450 (41.11%), Query Frame = 1
Query:   49 LEARLAVVVASDAVYYRLYYLQVTGLTAP---ESPWRVPAPHEYFGLPGLACNVA-AGLSAQEAFFRS--APLDALAVELFGGAGGFQLLAPPPSSASATGGPGNAAASEADHPLLALWQARWRETCRFFWAAEPGWARQRRPAALAARRRG--------AQHLLPEFACHEAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVARL-----GRGVVEVGAGMGYWAEVLRRGAGIEVFAV---DAAPPGEALVSNALWIRSKGATYHGDAPAFGPVALGGPEAAA----ERPAFA--LLLCYPPPASDMAAAALRCYR---GGFVMHVGEWRGLTGDASFETALQREFSLRE--TVPLPPWGTDASHLTVWERRPGIVPPGTTAGLAAAAALANLPACATCGAR-----ARWRCRLARSLDYCGARCCVAHEPTRRAVLAFAMLDV 1284
            ++ARL V+ +SD VYYR YY  +T   A    +    +P P  YF  PGL  + +  G  A   F  S  + +   A  L     G +      + A               +PLL LWQ+R  ET R  W         RR       R+G        AQ +  +   ++  A                                 R      G G VE GAG GYWA ++ R  G   F+V   D APP     S+A+        YHG  P F  V        A    ER +    L+LCYPPP SDM A AL  +    G  ++H+GEW+GLTG+A+FE+ L + F   +     L  WG+DA++LT+W+RR         A  A     +  PA   C ++     A+ RCR AR L YC   C   H   RR+ LA  M+ V
Sbjct:  330 IDARLVVMASSDDVYYRCYYAAITSNNATGGAKMMAMIPHPATYFTCPGLTWDSSNIGQRALRFFVDSDDSIIGDTATSLLLDTWGLRSRLSTDNLAGKD--------DRCSNPLLILWQSRLLETIRHIWTTRYSSVVSRRALLNTTNRKGRLDIKNNNAQEI--QLKLNDTTAISDAVSLWRDSVRDYPANYYAYAAPTDEALEAIRSILELSGGGAVEAGAGTGYWAALINRSLGKSKFSVIPYDIAPPSYLSESSAVSNE-----YHGRIPTFTNVQQANTFEMALSDSERQSMTKTLILCYPPPGSDMGANALSMHLSNGGDTLIHIGEWQGLTGNAAFESLLSKHFICADCNVKYLSMWGSDATYLTIWKRR-------RDANDATKHPASYSPAFGYCSSQPCSHLAKRRCRFARCLQYCSIGCFEKHATARRSFLALHMVHV 757          
BLAST of mRNA_P-wetherbeei_contig1912.2.1 vs. uniprot
Match: A0A7S2LLY3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LLY3_9STRA)

HSP 1 Score: 120 bits (302), Expect = 1.320e-26
Identity = 126/412 (30.58%), Postives = 177/412 (42.96%), Query Frame = 1
Query:   76 ASDAVYYRLYYLQVTGLTA----PESPWRVPAPHEYFGLPGLACNVAAGLSAQEAFFRSAPLDALAVELFGGAGGFQLLAPPPSSASATGGPGNAAASEADHPLLALWQARWRETCRFFWAAEPGW------ARQRRPAALAARRRGAQHLLPEFACHEAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVARLGRGVVEVGAGMGYWAEVLRRGAGIEVFAVDAAPPGEALVSNALWIRSKGATYHGDAPAFGPVALGGPEAA---AERPAFALLLCYPPPASDMAAAALRCYR---GGFVMHVGEWRGLTGDASFETALQREFSLRETVPLPPWGTDASHLTVWERRPGIVPPGTTAGLAAAAALANLPACATCGAR-ARWRCRLARSLDYCGARCCVAHEPTRRAV 1260
            A+DA+YYRLYY QV G TA          VP   ++F  P LA +V  G  + ++F  +        E              P + +      +A+ S   +PL  L++AR +ET   F+A+  GW       RQ   A  A R    Q    E    +A                                 V+     ++E+GAG GY A ++ + AG+ + A+D AP    + S           YHG +P+F  V  GGP +     +    ALLLCYPPP S MA   L+ +    G +++H+GE+ GLTG A FET L   F     +  P WGTDA+ LT+++R                   A L  C+ C  R A  RC LARSL YCG  C + H  +RR +
Sbjct:    1 AADALYYRLYYNQVAGNTANLMEASRHSHVPNLRDHFVTPNLARDVYEGEESWKSFLSNTNEHVEGKEAI------------PCTIADMVRFDDASPSNISNPLFELYKARMKETVHLFYAS--GWYKHASVQRQHIDALRAYRSSTQQQEEHETPAAKALVMWRDSCRDFACNVYAYASITSPMLKKMKEVLVSNGIESMIEIGAGTGYIANLIEQ-AGLPIQALDIAPTSNCIDSFN--------DYHGKSPSFTLVEEGGPSSLLSIVQIKKKALLLCYPPPGSLMARDCLKNFMRSGGNYIVHIGEFAGLTGCARFETILSTNFRCELRMSCPSWGTDAAFLTIFKRNDRRCKEEN----------AVLIPCSNCSVRPATKRCLLARSLAYCGKNCFLQHARSRREI 379          
BLAST of mRNA_P-wetherbeei_contig1912.2.1 vs. uniprot
Match: A0A8J9RQA9_9CHLO (Uncharacterized protein n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RQA9_9CHLO)

HSP 1 Score: 121 bits (304), Expect = 4.610e-26
Identity = 72/146 (49.32%), Postives = 88/146 (60.27%), Query Frame = 1
Query:  646 VVEVGAGMGYWAEVLRRGAGIEVFAVDAAPPGEALVSNALWIRSKGATYHGDAPAFGPVALGGPEAAAERP-AFALLLCYPPPASDMAAAALRCYRGGFVMHVGEWRGLTGDASFETALQREFSLRETVPLPPWGTDASHLTVWER 1080
            ++E+GAG+GYWA  LR   G+++ A+D+ PPG   V+          TYHG  PAF  VA GGP AAA    A +L LCYPPPAS MA   LR +RG  V  VGEW G TGD SF  AL  ++SL   V LP W   A  LT+W+R
Sbjct:  459 LLEIGAGLGYWAAALRA-RGVQISALDSHPPGNNAVN----------TYHGRIPAFTKVAQGGPRAAAAASEAHSLFLCYPPPASPMATDCLRSFRGRVVCVVGEWLGDTGDESFAAALLSDWSLIRRVALPNWTDTAHELTIWQR 593          
BLAST of mRNA_P-wetherbeei_contig1912.2.1 vs. uniprot
Match: B7G2R3_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G2R3_PHATC)

HSP 1 Score: 113 bits (282), Expect = 2.590e-23
Identity = 86/223 (38.57%), Postives = 117/223 (52.47%), Query Frame = 1
Query:  640 RGVVEVGAGMGYWAEVLRRGAGIEVFAVDAAPPGEALVSNALWIRSKGATYHGDAPAFGPVALGGPEAAAERPAF------ALLLCYPPPASDMAAAALRCY---RGGFVMHVGEWRGLTGDASFETALQREFSLRETVPLPPWGTDASHLTVWERRPGIVPPGTTAGLAAAAALANLPACATCGARAR-WRCRLARSLDYCGARCCVAHEPTRRAVLAFAML 1278
            +G++E GAG GY A +  R AGI   A D  P      SN+  + +    YHG  P++  V  G  +++A    F      ALLLCYPPP S MA  ALR +    G   +HVGE+RGLTG+++FE  L  +F+L +  P  PWGTDA+ LT+W RR            +   + + L  C++CG R    R RL R L YC A C   H+P+    L +A L
Sbjct:  409 QGIIEAGAGTGYIANLFIR-AGISTEAFDVHPTNSG--SNSSSVHNG---YHGATPSYVSVRQG--KSSALHKYFSHTFSKALLLCYPPPDSTMAYDALRSFVQHGGSLFVHVGEFRGLTGNSTFEQLLMDDFALLQRFPCLPWGTDAAELTIWRRRKA----------SDNTSKSRLLPCSSCGTRESVQRLRLVRYLTYCSAECAQQHQPSISEHLRWAFL 613          
BLAST of mRNA_P-wetherbeei_contig1912.2.1 vs. uniprot
Match: A0A7S3Q2U7_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q2U7_9STRA)

HSP 1 Score: 107 bits (266), Expect = 3.710e-21
Identity = 134/450 (29.78%), Postives = 186/450 (41.33%), Query Frame = 1
Query:   67 VVVASDAVYYRLYYLQVTG----LTAPESPWR-------VPAPHEYFGLPGLACNVAAGLSAQEAFFRSAPLDA---LAVELFGGAGGFQLLAPPPSSASATGGPGNAAASEADHPLLALWQARWRETCRFFWAAEPGWARQRRPAALAARRRGAQHLLPEFAC---------HEAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVAR--LGRG---VVEVGAGMGYWAEVLRRGAGIEVFAVDAAPPGEALV------SNALWIRSKGATYHGDAPAFGPV--------ALGGPEAAAERPAFALLLCYPPPASDMAAAALRCYR---GGFVMHVGEWRGLTGDASFETALQREFSLRETVPLPPWGTDASHLTVWERRPGIVPPGTTAGLAAAAALANLPACATCG-ARARWRCRLARSLDYCGARCCVAHEPTRRAVLAFAML 1278
            +V+  D  YYRLYYLQ  G    L      W        +P P  YFG   +A NV  G      F++S   +       E+   AG F     P  +            S    PL  L Q R  ET   FW +  GW R   P  +A      Q L  ++A          H  PA                              A+ +  + +G   V+E+GAG GY A +L  G G+ V A D +P  EA V      S  + +      YHG+AP F  V        A+  P+  A+  A ALLLCYPPP S MA   +  +    G  ++H+GE+RGLTG   FE  L   F +   +    WGTDA+++ +  + P  V   T          A+L  C+ C  + ++ RCR+ARSL YC + C   H+  RR +L  +M+
Sbjct:  358 LVIKCDDAYYRLYYLQNAGYYNSLRYASIDWEQSHCQPFIPHPPTYFGTSNMAWNVTKGKERMLRFYKSMQCNKEHESMNEMLVNAGMFLDKDAPLKNEFGD-------KSTLLDPLSFLHQNRHCETVSIFWKS--GWLRS--PKTMAQTSEAMQPLSRKWASDTEEAFYRRHSTPAPLLLSEWRDSCRDLLCNLYAYAALSPAVVQALKKSLVEQGIQKVIEMGAGTGYIATLLS-GTGVTVAAYDISPT-EADVGQDYGPSQGMHVND----YHGNAPPFCKVTHASSKNTAMFFPDGTAQ--ATALLLCYPPPMSSMAEDTILEFLRIGGRTIVHIGEFRGLTGSEGFENILANHFQMCTRLSCLRWGTDAANVAILSKIPS-VKKSTYRRSEKGELSASLLNCSNCQRSGSKRRCRIARSLTYCSSECFKEHDKFRRIILGMSMI 787          
BLAST of mRNA_P-wetherbeei_contig1912.2.1 vs. uniprot
Match: A0A812UIX3_SYMMI (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812UIX3_SYMMI)

HSP 1 Score: 106 bits (264), Expect = 6.340e-21
Identity = 77/207 (37.20%), Postives = 102/207 (49.28%), Query Frame = 1
Query:  646 VVEVGAGMGYWAEVLRRGAGIEVFAVDAAPPGEALVSNALWIRSKGATYHGDAPAFGPVALGGPEAAAERPAFALLLCYPPPASDMAAAALRCYRGGFVMHVGEWRGLTGDASFETALQREFSLRETVPLPPWGTDASHLTVWERRPGI---VPPGTTAGLAAAAALANLPACATCGA-RARWRCRLARSLDYCGARCCVAHEPTRR 1254
            ++E+GAG GYWA +LRR + + V A D            + +      YHG +PA+  V  GGPEAAA     AL LCYPPP  +MA   L  + G  V+ VGEW G T    F+  L + F L +TVPLP W   A+ L+VW+RRP     +PP            A+   C  CGA     RCRL+    +C   C    + + R
Sbjct:  187 LLEIGAGTGYWAYLLRRRS-VVVHAYD------------IRLARDDNDYHGHSPAWTRVERGGPEAAANHAGSALFLCYPPP-GNMALQVLNFFPGNRVLLVGEWSGDTASQKFQEKLMQTFELVDTVPLPNWADTAAALSVWQRRPRPLKRIPPE-----------ASPLRCWHCGAAEGLKRCRLSYEATFCSKACASKKQTSTR 368          
BLAST of mRNA_P-wetherbeei_contig1912.2.1 vs. uniprot
Match: A0A812YGX0_9DINO (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812YGX0_9DINO)

HSP 1 Score: 103 bits (256), Expect = 1.110e-20
Identity = 114/372 (30.65%), Postives = 156/372 (41.94%), Query Frame = 1
Query:   13 DTAKARKPTLAA----LEARLAVVVASDAVYYRLYYLQVTGLTAPESPWRVPAPHEYFGLPGLACNVAAGLSAQEAFFRSAPLDALAVELFGGAGGFQLLAPPPSSASATGGPGNAAASEADHPLLALWQARWRETCRFFWAAEPGWARQRRPAALAARRRGAQHLLPEFA-CHEAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVA--------RLGRG--VVEVGAGMGYWAEVLRRGAGIEVFAVDAAPPGEALVSNALWIRSKGATYHGDAPAFGPVALGGPEAAAERPAFALLLCYPPPASDMAAAALRCYRGGFVMHVGEWRGLTGDASFETALQREFSLRETVPLPPWGTDASHLTVWERR 1083
            + AK  K TL A       ++ ++++ D  Y+RL YL  + L AP +   VPAPH YF     A  + +G   Q    + +  +A   E+   AG  Q+L           G G    S  ++PL +L Q RW E+     AA+                     LLP    C + P                               + A        RL     ++E+GAG GYWA +LRR + + V A D            + +      YHG +PA+  V  GGPEAAA     AL LCYPPP  +MA   L  + G  V+ VGEW G T    F+  L + F L ETVPLP W   A+ L+VW+RR
Sbjct:   47 EAAKEVKSTLVAGKVNARGKVKMIISLDKAYHRLRYLCASFLGAPATE-TVPAPHVYF-----ASFLPSGDGVQRTLRQMS--EAAGTEVAAEAG--QML-----------GLGE---SLEENPLASLLQTRWVESGALLAAAD---------------------LLPSLGDCSDGPPGDTMKSPDPRTSQLVREWRDSVRVWACHLYSYAVPSERALRRLAAEAPLLEIGAGTGYWAYMLRRRS-VVVHAYD------------IRLARDDNEYHGHSPAWTRVERGGPEAAANHAGSALFLCYPPP-GNMALQVLNFFPGDRVLLVGEWSGDTASQKFQEKLMQTFELVETVPLPNWADTAAALSVWQRR 359          
BLAST of mRNA_P-wetherbeei_contig1912.2.1 vs. uniprot
Match: A0A7S3BJF5_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3BJF5_9EUKA)

HSP 1 Score: 97.1 bits (240), Expect = 3.760e-19
Identity = 63/147 (42.86%), Postives = 75/147 (51.02%), Query Frame = 1
Query:  649 VEVGAGMGYWAEVLRRGAGIEVFAVDAAPPGEALVSNALWIRSKGATYHGDAPAFGPVALGGPEAAAERP--AFALLLCYPPPASDMAAAALRCYRGGFVMHVGEWRGLTGDASFETALQREFSLRETVPLPPWGTDASHLTVWERR 1083
            VE+GAG GYWA +LR   G+ V A DA PP   L  +          +HG    F  V  G P   +E      ALLLCYPPP S MA A LR + G    HVGEW G TG  +FE  L   + L    PLP WG  +  L++W RR
Sbjct:  123 VEMGAGTGYWARLLRA-RGVSVVAFDAEPPERTLPGSN--------EFHGGCMTFVEVEQGEPNILSEPRWRGHALLLCYPPPRSKMALACLRNFCGELFAHVGEWLGDTGSCAFERHLLSHWELIRREPLPLWGDTSDDLSLWRRR 260          
BLAST of mRNA_P-wetherbeei_contig1912.2.1 vs. uniprot
Match: A0A7S0GWH5_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0GWH5_MICPS)

HSP 1 Score: 99.0 bits (245), Expect = 5.710e-19
Identity = 68/164 (41.46%), Postives = 83/164 (50.61%), Query Frame = 1
Query:  649 VEVGAGMGYWAEVLRRGAGIEVFAVDAAPPGEALVSNALWIRSKGATYHGDAPAFGPVALGGPEAAAERPAF-----------------ALLLCYPPPASD--MAAAALRCYRGGFVMHVGEWRGLTGDASFETALQREFSLRETVPLPPWGTDASHLTVWERR 1083
            +EVGAG GYWA  +R  +G++V AVD APPGE   ++          YHG    + PV + G  AAA R A                  AL +CYPPP  D  MA   L  YRGG +  VGEW G T D +F + L + F L+    LP WG  A  LTVW RR
Sbjct:  160 LEVGAGAGYWAAQMRL-SGMDVVAVDVAPPGEETHND----------YHGSTATWHPV-VRGDAAAAFRSAGDKTTSSETREEGGEEGRALFMCYPPPGFDSRMAVETLELYRGGVLALVGEWDGNTADGAFASVLTKHFYLKRRAALPQWGDTAHELTVWVRR 311          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1912.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
K0SSL7_THAOC1.860e-3533.04Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
B8BTG3_THAPS2.580e-2730.44Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S2LLY3_9STRA1.320e-2630.58Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A8J9RQA9_9CHLO4.610e-2649.32Uncharacterized protein n=1 Tax=Coccomyxa sp. Obi ... [more]
B7G2R3_PHATC2.590e-2338.57Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A7S3Q2U7_9STRA3.710e-2129.78Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A812UIX3_SYMMI6.340e-2137.20Hypothetical protein (Fragment) n=1 Tax=Symbiodini... [more]
A0A812YGX0_9DINO1.110e-2030.65Hypothetical protein (Fragment) n=1 Tax=Symbiodini... [more]
A0A7S3BJF5_9EUKA3.760e-1942.86Hypothetical protein (Fragment) n=1 Tax=Haptolina ... [more]
A0A7S0GWH5_MICPS5.710e-1941.46Hypothetical protein n=1 Tax=Micromonas pusilla Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1912contigP-wetherbeei_contig1912:604..2430 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog159749.K0SSL7
Model size1284
Max annot lvl2836|Bacillariophyta
Hectar predicted targeting categoryother localisation
Exons4
Evalue3.05e-36
EggNOG OGs29H2K@1|root,2RQ99@2759|Eukaryota,2XCT8@2836|Bacillariophyta
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-01_002890.1
Cds size1284
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186164.4379413-CDS-P-wetherbeei_contig1912:603..7881683186164.4379413-CDS-P-wetherbeei_contig1912:603..788Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1912 604..788 -
1683186164.4493067-CDS-P-wetherbeei_contig1912:998..13081683186164.4493067-CDS-P-wetherbeei_contig1912:998..1308Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1912 999..1308 -
1683186164.4587877-CDS-P-wetherbeei_contig1912:1578..20301683186164.4587877-CDS-P-wetherbeei_contig1912:1578..2030Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1912 1579..2030 -
1683186164.4681542-CDS-P-wetherbeei_contig1912:2093..24301683186164.4681542-CDS-P-wetherbeei_contig1912:2093..2430Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1912 2094..2430 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1912.2.1prot_P-wetherbeei_contig1912.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1912 604..2430 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1912.2.1

>prot_P-wetherbeei_contig1912.2.1 ID=prot_P-wetherbeei_contig1912.2.1|Name=mRNA_P-wetherbeei_contig1912.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=428bp
AAAADTAKARKPTLAALEARLAVVVASDAVYYRLYYLQVTGLTAPESPWR
VPAPHEYFGLPGLACNVAAGLSAQEAFFRSAPLDALAVELFGGAGGFQLL
APPPSSASATGGPGNAAASEADHPLLALWQARWRETCRFFWAAEPGWARQ
RRPAALAARRRGAQHLLPEFACHEAPAPAALAAWRDSCRDFPASMYAYAA
PTPAAVAAVARLGRGVVEVGAGMGYWAEVLRRGAGIEVFAVDAAPPGEAL
VSNALWIRSKGATYHGDAPAFGPVALGGPEAAAERPAFALLLCYPPPASD
MAAAALRCYRGGFVMHVGEWRGLTGDASFETALQREFSLRETVPLPPWGT
DASHLTVWERRPGIVPPGTTAGLAAAAALANLPACATCGARARWRCRLAR
SLDYCGARCCVAHEPTRRAVLAFAMLDV
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mRNA from alignment at P-wetherbeei_contig1912:604..2430-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1912.2.1 ID=mRNA_P-wetherbeei_contig1912.2.1|Name=mRNA_P-wetherbeei_contig1912.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1827bp|location=Sequence derived from alignment at P-wetherbeei_contig1912:604..2430- (Phaeothamnion wetherbeei SAG_119_79)
GCCGCTGCCGCGGACACAGCAAAAGCAAGAAAGCCCACTCTCGCGGCGCT GGAGGCGCGGCTGGCCGTCGTGGTCGCGTCCGACGCCGTGTACTACCGCC TCTACTACTTGCAGGTGACGGGGCTGACGGCACCGGAGAGCCCCTGGCGC GTGCCGGCGCCGCATGAGTATTTTGGGCTGCCCGGCCTGGCCTGCAATGT TGCCGCGGGACTGTCGGCCCAGGAGGCGTTCTTCCGGTCCGCACCGCTGG ATGCCCTCGCTGTGGAACTTTTTGGCGGTGCCGGCGGCTTTCAGCTCTTG GCGCCGCCGCCATCGTCTGCATCCGCCACCGGTGGCCGTCCTGCGTCGCC CGCCGCTGCAGCCGGTGGCCGTGGTACCGGTGCCGGCGCCGCCGCTGCAG CTGGAAATGCCGCCGCATCGGAAGCCGATCACCCGCTGCTGGCGCTCTGG CAGGCGCGTTGGCGCGAGACGTGCCGTTTCTTCTGGGCTGCCGAGCCCGG CTGGGCGCGGCAGCGGCGGCCGGCGGCGCTGGCGGCTCGCCGCCGCGGCG CGCAGCACCTGCTGCCGGAGTTCGCGTGCCACGAGGCGCCGGCGCCGGCT GCGCTGGCGGCGTGGCGCGACAGCTGCCGCGACTTCCCGGCCAGCATGTA CGCATACGCGGCGCCGACACCAGCCGCCGTCGCCGCCGTGGCGCGGCTGG GGCGCGGTGTGGTGGAGGTGGGGGCTGGGATGGGCTATTGGGCGGAGGTG CTGCGGCGAGGCGCGGGGATCGAGGTCTTCGCCGTCGACGCGGCGCCGCC GGGTGAGGCACTCGTCTCTAATGCTTTGTGGATTCGGAGTAAAGGAGCTA CGGTACGACACCATTGGTGGATATGATCCTGAAATCGCTCTTTTTCTCCT CTTTCTCAATGTCGATATGCGCTTCGTTTTAATCTTGCAGCTCCTGAGCG AACGTCTGGCGTCTGGTTTGAGGTCGACGACTCGTGCCGACACCGAAAAT GCCATTTCTGGGGTCTCGAACGTCATCTTTTCTGGTTCTGAAGCTGAATC TCGGTATCGAATACTCTTGTCCCGGGTACAACGGAACCGCTTTTGCGGCA CACAGGCCATTCCTACAATGAGTACCACGGCGACGCCCCCGCCTTCGGCC CCGTCGCCCTCGGCGGGCCCGAGGCGGCCGCCGAACGCCCGGCCTTCGCG CTGCTCCTCTGCTATCCGCCGCCCGCCTCTGACATGGCTGCGGCGGCGCT CCGCTGCTACCGCGGCGGCTTCGTCATGCACGTCGGCGAGTGGCGCGGGC TGACAGGCGACGCGAGCTTCGAGACGGCACTCCAGCGGGAGTTTTCGCTG CGGGAAACCGTGCCGCTGCCGCCGTGGGGCACTGACGCCAGCCACCTGAC GGTGTGGGAGCGGCGGCCGGGGATCGTTCCGCGTGGGCCGGGGCGCACCG GCGGCGGCGACCGCGGTGATGCCGCCGCCGACAGCACTGGTTGCAGCGGC CGCGGCAAAAAAAGGAAAGGCGGCAGCAAACGCGATGGCAGCGATGGCGG CGGCGATGCCGGAGCCAGCAACGGAGGCCCGGCGCGAGTGGAAACAGCAC AGACTGCAGCAACATCGGCGACGGCAGCCAGCGCGACCACAGCGGGTACA ACGGCAGGACTTGCAGCAGCCGCCGCCCTGGCGAACCTCCCGGCGTGCGC CACCTGCGGCGCCCGCGCCCGGTGGCGCTGCCGCCTCGCCCGCAGCCTTG ACTATTGCGGCGCCCGCTGTTGCGTGGCGCACGAGCCGACACGGCGGGCG GTGCTCGCCTTCGCCATGCTGGACGTC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1912:604..2430-

>mRNA_P-wetherbeei_contig1912.2.1 ID=mRNA_P-wetherbeei_contig1912.2.1|Name=mRNA_P-wetherbeei_contig1912.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1284bp|location=Sequence derived from alignment at P-wetherbeei_contig1912:604..2430- (Phaeothamnion wetherbeei SAG_119_79)
GCCGCTGCCGCGGACACAGCAAAAGCAAGAAAGCCCACTCTCGCGGCGCT
GGAGGCGCGGCTGGCCGTCGTGGTCGCGTCCGACGCCGTGTACTACCGCC
TCTACTACTTGCAGGTGACGGGGCTGACGGCACCGGAGAGCCCCTGGCGC
GTGCCGGCGCCGCATGAGTATTTTGGGCTGCCCGGCCTGGCCTGCAATGT
TGCCGCGGGACTGTCGGCCCAGGAGGCGTTCTTCCGGTCCGCACCGCTGG
ATGCCCTCGCTGTGGAACTTTTTGGCGGTGCCGGCGGCTTTCAGCTCTTG
GCGCCGCCGCCATCGTCTGCATCCGCCACCGGTGGCCCTGGAAATGCCGC
CGCATCGGAAGCCGATCACCCGCTGCTGGCGCTCTGGCAGGCGCGTTGGC
GCGAGACGTGCCGTTTCTTCTGGGCTGCCGAGCCCGGCTGGGCGCGGCAG
CGGCGGCCGGCGGCGCTGGCGGCTCGCCGCCGCGGCGCGCAGCACCTGCT
GCCGGAGTTCGCGTGCCACGAGGCGCCGGCGCCGGCTGCGCTGGCGGCGT
GGCGCGACAGCTGCCGCGACTTCCCGGCCAGCATGTACGCATACGCGGCG
CCGACACCAGCCGCCGTCGCCGCCGTGGCGCGGCTGGGGCGCGGTGTGGT
GGAGGTGGGGGCTGGGATGGGCTATTGGGCGGAGGTGCTGCGGCGAGGCG
CGGGGATCGAGGTCTTCGCCGTCGACGCGGCGCCGCCGGGTGAGGCACTC
GTCTCTAATGCTTTGTGGATTCGGAGTAAAGGAGCTACGTACCACGGCGA
CGCCCCCGCCTTCGGCCCCGTCGCCCTCGGCGGGCCCGAGGCGGCCGCCG
AACGCCCGGCCTTCGCGCTGCTCCTCTGCTATCCGCCGCCCGCCTCTGAC
ATGGCTGCGGCGGCGCTCCGCTGCTACCGCGGCGGCTTCGTCATGCACGT
CGGCGAGTGGCGCGGGCTGACAGGCGACGCGAGCTTCGAGACGGCACTCC
AGCGGGAGTTTTCGCTGCGGGAAACCGTGCCGCTGCCGCCGTGGGGCACT
GACGCCAGCCACCTGACGGTGTGGGAGCGGCGGCCGGGGATCGTTCCGCC
GGGTACAACGGCAGGACTTGCAGCAGCCGCCGCCCTGGCGAACCTCCCGG
CGTGCGCCACCTGCGGCGCCCGCGCCCGGTGGCGCTGCCGCCTCGCCCGC
AGCCTTGACTATTGCGGCGCCCGCTGTTGCGTGGCGCACGAGCCGACACG
GCGGGCGGTGCTCGCCTTCGCCATGCTGGACGTC
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