mRNA_P-wetherbeei_contig1912.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1912.2.1 vs. uniprot
Match: K0SSL7_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SSL7_THAOC) HSP 1 Score: 149 bits (376), Expect = 1.860e-35 Identity = 150/454 (33.04%), Postives = 203/454 (44.71%), Query Frame = 1
Query: 49 LEARLAVVVASDAVYYRLYYLQVTGLTAPES----PWRVPAPHEYFGLPGLACNVA-AGLSAQEAFFR---------SAPLDALAVELFGGAGGFQLLAPPPSSASATGGPGNAA--ASEADHPLLALWQARWRETCRFFWAAEPGWARQRRPAALAARRRGAQHLL------PEFACHEAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAV-------ARLG--RG-----VVEVGAGMGYWAEVLRRGA----GIEVFAVDAAPPGEALVSNALWIRSKGATYHGDAPAFGPVALGGP-EAAAERPAFALLLCYPPPASDMAAAALRCY--RGG-FVMHVGEWRGLTGDASFETALQREFSLRETVPLPPWGTDASHLTVWERRPGIVPPGTTAGLAAAAALANLPACATCGARARWRCRLARSLDYCGARCCVAHEPTRRAVLAFAML 1278
+E RLAV+ A D VYYR YY +T VP P YF P LA +V AGL + + +APLD ++ + G + GG GN + S +++PLLALWQ+R+ ET R W ++ + AL++R R + E HEA A ++LG RG +VE GAG GYWA +L++ G+ V D PP VS+ +S+G YHG+ P F PV EA + + LLLCYPPP S+MA AL Y RGG ++H+GEW+GLTG ASFE+ L++ + V LP WGTDA++LTVW R G A + AA ++ C R R AR L YC C H R++ LA M+
Sbjct: 288 VERRLAVMAACDGVYYRCYYSVLTSRIPDRLGALVATLVPHPPTYFSCPNLAWDVEHAGLDSFRLYLGKCNKFGKSFAAPLDNPTRQMILSSWGLR---------DRLGGVGNISNDQSSSNNPLLALWQSRFIETIRHLWVTR--YSELQSHQALSSRSRSDEKRQMVRSHGSELDRHEAEALKPAMAEWRDSTRDYPANLMAYATPTPDALQAVLESLVSSQLGASRGDRLTSLVEAGAGTGYWAALLQKSLEKNEGLSVVPYDIVPPSGNEVSS----QSQGNEYHGEVPCFTPVRQSAQLEATTDANSACLLLCYPPPESEMAHDALASYLSRGGRTIIHIGEWQGLTGSASFESLLKQSCLVHRVVCLPCWGTDAAYLTVWNARVADSQKGCDASSSPAAGYCSVQGCNCPALR---RSLHARMLQYCSQECFEKHSVQRQSTLALHMV 723
BLAST of mRNA_P-wetherbeei_contig1912.2.1 vs. uniprot
Match: B8BTG3_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BTG3_THAPS) HSP 1 Score: 125 bits (314), Expect = 2.580e-27 Identity = 137/450 (30.44%), Postives = 185/450 (41.11%), Query Frame = 1
Query: 49 LEARLAVVVASDAVYYRLYYLQVTGLTAP---ESPWRVPAPHEYFGLPGLACNVA-AGLSAQEAFFRS--APLDALAVELFGGAGGFQLLAPPPSSASATGGPGNAAASEADHPLLALWQARWRETCRFFWAAEPGWARQRRPAALAARRRG--------AQHLLPEFACHEAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVARL-----GRGVVEVGAGMGYWAEVLRRGAGIEVFAV---DAAPPGEALVSNALWIRSKGATYHGDAPAFGPVALGGPEAAA----ERPAFA--LLLCYPPPASDMAAAALRCYR---GGFVMHVGEWRGLTGDASFETALQREFSLRE--TVPLPPWGTDASHLTVWERRPGIVPPGTTAGLAAAAALANLPACATCGAR-----ARWRCRLARSLDYCGARCCVAHEPTRRAVLAFAMLDV 1284
++ARL V+ +SD VYYR YY +T A + +P P YF PGL + + G A F S + + A L G + + A +PLL LWQ+R ET R W RR R+G AQ + + ++ A R G G VE GAG GYWA ++ R G F+V D APP S+A+ YHG P F V A ER + L+LCYPPP SDM A AL + G ++H+GEW+GLTG+A+FE+ L + F + L WG+DA++LT+W+RR A A + PA C ++ A+ RCR AR L YC C H RR+ LA M+ V
Sbjct: 330 IDARLVVMASSDDVYYRCYYAAITSNNATGGAKMMAMIPHPATYFTCPGLTWDSSNIGQRALRFFVDSDDSIIGDTATSLLLDTWGLRSRLSTDNLAGKD--------DRCSNPLLILWQSRLLETIRHIWTTRYSSVVSRRALLNTTNRKGRLDIKNNNAQEI--QLKLNDTTAISDAVSLWRDSVRDYPANYYAYAAPTDEALEAIRSILELSGGGAVEAGAGTGYWAALINRSLGKSKFSVIPYDIAPPSYLSESSAVSNE-----YHGRIPTFTNVQQANTFEMALSDSERQSMTKTLILCYPPPGSDMGANALSMHLSNGGDTLIHIGEWQGLTGNAAFESLLSKHFICADCNVKYLSMWGSDATYLTIWKRR-------RDANDATKHPASYSPAFGYCSSQPCSHLAKRRCRFARCLQYCSIGCFEKHATARRSFLALHMVHV 757
BLAST of mRNA_P-wetherbeei_contig1912.2.1 vs. uniprot
Match: A0A7S2LLY3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LLY3_9STRA) HSP 1 Score: 120 bits (302), Expect = 1.320e-26 Identity = 126/412 (30.58%), Postives = 177/412 (42.96%), Query Frame = 1
Query: 76 ASDAVYYRLYYLQVTGLTA----PESPWRVPAPHEYFGLPGLACNVAAGLSAQEAFFRSAPLDALAVELFGGAGGFQLLAPPPSSASATGGPGNAAASEADHPLLALWQARWRETCRFFWAAEPGW------ARQRRPAALAARRRGAQHLLPEFACHEAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVARLGRGVVEVGAGMGYWAEVLRRGAGIEVFAVDAAPPGEALVSNALWIRSKGATYHGDAPAFGPVALGGPEAA---AERPAFALLLCYPPPASDMAAAALRCYR---GGFVMHVGEWRGLTGDASFETALQREFSLRETVPLPPWGTDASHLTVWERRPGIVPPGTTAGLAAAAALANLPACATCGAR-ARWRCRLARSLDYCGARCCVAHEPTRRAV 1260
A+DA+YYRLYY QV G TA VP ++F P LA +V G + ++F + E P + + +A+ S +PL L++AR +ET F+A+ GW RQ A A R Q E +A V+ ++E+GAG GY A ++ + AG+ + A+D AP + S YHG +P+F V GGP + + ALLLCYPPP S MA L+ + G +++H+GE+ GLTG A FET L F + P WGTDA+ LT+++R A L C+ C R A RC LARSL YCG C + H +RR +
Sbjct: 1 AADALYYRLYYNQVAGNTANLMEASRHSHVPNLRDHFVTPNLARDVYEGEESWKSFLSNTNEHVEGKEAI------------PCTIADMVRFDDASPSNISNPLFELYKARMKETVHLFYAS--GWYKHASVQRQHIDALRAYRSSTQQQEEHETPAAKALVMWRDSCRDFACNVYAYASITSPMLKKMKEVLVSNGIESMIEIGAGTGYIANLIEQ-AGLPIQALDIAPTSNCIDSFN--------DYHGKSPSFTLVEEGGPSSLLSIVQIKKKALLLCYPPPGSLMARDCLKNFMRSGGNYIVHIGEFAGLTGCARFETILSTNFRCELRMSCPSWGTDAAFLTIFKRNDRRCKEEN----------AVLIPCSNCSVRPATKRCLLARSLAYCGKNCFLQHARSRREI 379
BLAST of mRNA_P-wetherbeei_contig1912.2.1 vs. uniprot
Match: A0A8J9RQA9_9CHLO (Uncharacterized protein n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RQA9_9CHLO) HSP 1 Score: 121 bits (304), Expect = 4.610e-26 Identity = 72/146 (49.32%), Postives = 88/146 (60.27%), Query Frame = 1
Query: 646 VVEVGAGMGYWAEVLRRGAGIEVFAVDAAPPGEALVSNALWIRSKGATYHGDAPAFGPVALGGPEAAAERP-AFALLLCYPPPASDMAAAALRCYRGGFVMHVGEWRGLTGDASFETALQREFSLRETVPLPPWGTDASHLTVWER 1080
++E+GAG+GYWA LR G+++ A+D+ PPG V+ TYHG PAF VA GGP AAA A +L LCYPPPAS MA LR +RG V VGEW G TGD SF AL ++SL V LP W A LT+W+R
Sbjct: 459 LLEIGAGLGYWAAALRA-RGVQISALDSHPPGNNAVN----------TYHGRIPAFTKVAQGGPRAAAAASEAHSLFLCYPPPASPMATDCLRSFRGRVVCVVGEWLGDTGDESFAAALLSDWSLIRRVALPNWTDTAHELTIWQR 593
BLAST of mRNA_P-wetherbeei_contig1912.2.1 vs. uniprot
Match: B7G2R3_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G2R3_PHATC) HSP 1 Score: 113 bits (282), Expect = 2.590e-23 Identity = 86/223 (38.57%), Postives = 117/223 (52.47%), Query Frame = 1
Query: 640 RGVVEVGAGMGYWAEVLRRGAGIEVFAVDAAPPGEALVSNALWIRSKGATYHGDAPAFGPVALGGPEAAAERPAF------ALLLCYPPPASDMAAAALRCY---RGGFVMHVGEWRGLTGDASFETALQREFSLRETVPLPPWGTDASHLTVWERRPGIVPPGTTAGLAAAAALANLPACATCGARAR-WRCRLARSLDYCGARCCVAHEPTRRAVLAFAML 1278
+G++E GAG GY A + R AGI A D P SN+ + + YHG P++ V G +++A F ALLLCYPPP S MA ALR + G +HVGE+RGLTG+++FE L +F+L + P PWGTDA+ LT+W RR + + + L C++CG R R RL R L YC A C H+P+ L +A L
Sbjct: 409 QGIIEAGAGTGYIANLFIR-AGISTEAFDVHPTNSG--SNSSSVHNG---YHGATPSYVSVRQG--KSSALHKYFSHTFSKALLLCYPPPDSTMAYDALRSFVQHGGSLFVHVGEFRGLTGNSTFEQLLMDDFALLQRFPCLPWGTDAAELTIWRRRKA----------SDNTSKSRLLPCSSCGTRESVQRLRLVRYLTYCSAECAQQHQPSISEHLRWAFL 613
BLAST of mRNA_P-wetherbeei_contig1912.2.1 vs. uniprot
Match: A0A7S3Q2U7_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q2U7_9STRA) HSP 1 Score: 107 bits (266), Expect = 3.710e-21 Identity = 134/450 (29.78%), Postives = 186/450 (41.33%), Query Frame = 1
Query: 67 VVVASDAVYYRLYYLQVTG----LTAPESPWR-------VPAPHEYFGLPGLACNVAAGLSAQEAFFRSAPLDA---LAVELFGGAGGFQLLAPPPSSASATGGPGNAAASEADHPLLALWQARWRETCRFFWAAEPGWARQRRPAALAARRRGAQHLLPEFAC---------HEAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVAR--LGRG---VVEVGAGMGYWAEVLRRGAGIEVFAVDAAPPGEALV------SNALWIRSKGATYHGDAPAFGPV--------ALGGPEAAAERPAFALLLCYPPPASDMAAAALRCYR---GGFVMHVGEWRGLTGDASFETALQREFSLRETVPLPPWGTDASHLTVWERRPGIVPPGTTAGLAAAAALANLPACATCG-ARARWRCRLARSLDYCGARCCVAHEPTRRAVLAFAML 1278
+V+ D YYRLYYLQ G L W +P P YFG +A NV G F++S + E+ AG F P + S PL L Q R ET FW + GW R P +A Q L ++A H PA A+ + + +G V+E+GAG GY A +L G G+ V A D +P EA V S + + YHG+AP F V A+ P+ A+ A ALLLCYPPP S MA + + G ++H+GE+RGLTG FE L F + + WGTDA+++ + + P V T A+L C+ C + ++ RCR+ARSL YC + C H+ RR +L +M+
Sbjct: 358 LVIKCDDAYYRLYYLQNAGYYNSLRYASIDWEQSHCQPFIPHPPTYFGTSNMAWNVTKGKERMLRFYKSMQCNKEHESMNEMLVNAGMFLDKDAPLKNEFGD-------KSTLLDPLSFLHQNRHCETVSIFWKS--GWLRS--PKTMAQTSEAMQPLSRKWASDTEEAFYRRHSTPAPLLLSEWRDSCRDLLCNLYAYAALSPAVVQALKKSLVEQGIQKVIEMGAGTGYIATLLS-GTGVTVAAYDISPT-EADVGQDYGPSQGMHVND----YHGNAPPFCKVTHASSKNTAMFFPDGTAQ--ATALLLCYPPPMSSMAEDTILEFLRIGGRTIVHIGEFRGLTGSEGFENILANHFQMCTRLSCLRWGTDAANVAILSKIPS-VKKSTYRRSEKGELSASLLNCSNCQRSGSKRRCRIARSLTYCSSECFKEHDKFRRIILGMSMI 787
BLAST of mRNA_P-wetherbeei_contig1912.2.1 vs. uniprot
Match: A0A812UIX3_SYMMI (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812UIX3_SYMMI) HSP 1 Score: 106 bits (264), Expect = 6.340e-21 Identity = 77/207 (37.20%), Postives = 102/207 (49.28%), Query Frame = 1
Query: 646 VVEVGAGMGYWAEVLRRGAGIEVFAVDAAPPGEALVSNALWIRSKGATYHGDAPAFGPVALGGPEAAAERPAFALLLCYPPPASDMAAAALRCYRGGFVMHVGEWRGLTGDASFETALQREFSLRETVPLPPWGTDASHLTVWERRPGI---VPPGTTAGLAAAAALANLPACATCGA-RARWRCRLARSLDYCGARCCVAHEPTRR 1254
++E+GAG GYWA +LRR + + V A D + + YHG +PA+ V GGPEAAA AL LCYPPP +MA L + G V+ VGEW G T F+ L + F L +TVPLP W A+ L+VW+RRP +PP A+ C CGA RCRL+ +C C + + R
Sbjct: 187 LLEIGAGTGYWAYLLRRRS-VVVHAYD------------IRLARDDNDYHGHSPAWTRVERGGPEAAANHAGSALFLCYPPP-GNMALQVLNFFPGNRVLLVGEWSGDTASQKFQEKLMQTFELVDTVPLPNWADTAAALSVWQRRPRPLKRIPPE-----------ASPLRCWHCGAAEGLKRCRLSYEATFCSKACASKKQTSTR 368
BLAST of mRNA_P-wetherbeei_contig1912.2.1 vs. uniprot
Match: A0A812YGX0_9DINO (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812YGX0_9DINO) HSP 1 Score: 103 bits (256), Expect = 1.110e-20 Identity = 114/372 (30.65%), Postives = 156/372 (41.94%), Query Frame = 1
Query: 13 DTAKARKPTLAA----LEARLAVVVASDAVYYRLYYLQVTGLTAPESPWRVPAPHEYFGLPGLACNVAAGLSAQEAFFRSAPLDALAVELFGGAGGFQLLAPPPSSASATGGPGNAAASEADHPLLALWQARWRETCRFFWAAEPGWARQRRPAALAARRRGAQHLLPEFA-CHEAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVA--------RLGRG--VVEVGAGMGYWAEVLRRGAGIEVFAVDAAPPGEALVSNALWIRSKGATYHGDAPAFGPVALGGPEAAAERPAFALLLCYPPPASDMAAAALRCYRGGFVMHVGEWRGLTGDASFETALQREFSLRETVPLPPWGTDASHLTVWERR 1083
+ AK K TL A ++ ++++ D Y+RL YL + L AP + VPAPH YF A + +G Q + + +A E+ AG Q+L G G S ++PL +L Q RW E+ AA+ LLP C + P + A RL ++E+GAG GYWA +LRR + + V A D + + YHG +PA+ V GGPEAAA AL LCYPPP +MA L + G V+ VGEW G T F+ L + F L ETVPLP W A+ L+VW+RR
Sbjct: 47 EAAKEVKSTLVAGKVNARGKVKMIISLDKAYHRLRYLCASFLGAPATE-TVPAPHVYF-----ASFLPSGDGVQRTLRQMS--EAAGTEVAAEAG--QML-----------GLGE---SLEENPLASLLQTRWVESGALLAAAD---------------------LLPSLGDCSDGPPGDTMKSPDPRTSQLVREWRDSVRVWACHLYSYAVPSERALRRLAAEAPLLEIGAGTGYWAYMLRRRS-VVVHAYD------------IRLARDDNEYHGHSPAWTRVERGGPEAAANHAGSALFLCYPPP-GNMALQVLNFFPGDRVLLVGEWSGDTASQKFQEKLMQTFELVETVPLPNWADTAAALSVWQRR 359
BLAST of mRNA_P-wetherbeei_contig1912.2.1 vs. uniprot
Match: A0A7S3BJF5_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3BJF5_9EUKA) HSP 1 Score: 97.1 bits (240), Expect = 3.760e-19 Identity = 63/147 (42.86%), Postives = 75/147 (51.02%), Query Frame = 1
Query: 649 VEVGAGMGYWAEVLRRGAGIEVFAVDAAPPGEALVSNALWIRSKGATYHGDAPAFGPVALGGPEAAAERP--AFALLLCYPPPASDMAAAALRCYRGGFVMHVGEWRGLTGDASFETALQREFSLRETVPLPPWGTDASHLTVWERR 1083
VE+GAG GYWA +LR G+ V A DA PP L + +HG F V G P +E ALLLCYPPP S MA A LR + G HVGEW G TG +FE L + L PLP WG + L++W RR
Sbjct: 123 VEMGAGTGYWARLLRA-RGVSVVAFDAEPPERTLPGSN--------EFHGGCMTFVEVEQGEPNILSEPRWRGHALLLCYPPPRSKMALACLRNFCGELFAHVGEWLGDTGSCAFERHLLSHWELIRREPLPLWGDTSDDLSLWRRR 260
BLAST of mRNA_P-wetherbeei_contig1912.2.1 vs. uniprot
Match: A0A7S0GWH5_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0GWH5_MICPS) HSP 1 Score: 99.0 bits (245), Expect = 5.710e-19 Identity = 68/164 (41.46%), Postives = 83/164 (50.61%), Query Frame = 1
Query: 649 VEVGAGMGYWAEVLRRGAGIEVFAVDAAPPGEALVSNALWIRSKGATYHGDAPAFGPVALGGPEAAAERPAF-----------------ALLLCYPPPASD--MAAAALRCYRGGFVMHVGEWRGLTGDASFETALQREFSLRETVPLPPWGTDASHLTVWERR 1083
+EVGAG GYWA +R +G++V AVD APPGE ++ YHG + PV + G AAA R A AL +CYPPP D MA L YRGG + VGEW G T D +F + L + F L+ LP WG A LTVW RR
Sbjct: 160 LEVGAGAGYWAAQMRL-SGMDVVAVDVAPPGEETHND----------YHGSTATWHPV-VRGDAAAAFRSAGDKTTSSETREEGGEEGRALFMCYPPPGFDSRMAVETLELYRGGVLALVGEWDGNTADGAFASVLTKHFYLKRRAALPQWGDTAHELTVWVRR 311 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1912.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1912.2.1 >prot_P-wetherbeei_contig1912.2.1 ID=prot_P-wetherbeei_contig1912.2.1|Name=mRNA_P-wetherbeei_contig1912.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=428bp AAAADTAKARKPTLAALEARLAVVVASDAVYYRLYYLQVTGLTAPESPWRback to top mRNA from alignment at P-wetherbeei_contig1912:604..2430- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1912.2.1 ID=mRNA_P-wetherbeei_contig1912.2.1|Name=mRNA_P-wetherbeei_contig1912.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1827bp|location=Sequence derived from alignment at P-wetherbeei_contig1912:604..2430- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1912:604..2430- >mRNA_P-wetherbeei_contig1912.2.1 ID=mRNA_P-wetherbeei_contig1912.2.1|Name=mRNA_P-wetherbeei_contig1912.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1284bp|location=Sequence derived from alignment at P-wetherbeei_contig1912:604..2430- (Phaeothamnion wetherbeei SAG_119_79)back to top |