mRNA_P-wetherbeei_contig19072.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig19072.1.1 vs. uniprot
Match: A0A835Z7W2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7W2_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 5.280e-15 Identity = 50/145 (34.48%), Postives = 76/145 (52.41%), Query Frame = 1
Query: 13 QVIIQDNTFGTNRFGLPFFVIVCIDGDARTRVICQGFLRKEDTAAFTWAFENYVRWCCDAGSCRPGVILTDDAKAAAAGIKKTMPITKHFLCSWHLYKNLKEQTDKHLRGDADLLRACRAAFRKAEYAATEEEFGGCWDDLMVSM 447
VI QD T GTN++GL +IV ++GD++TR+ CQ L +EDT AF+W F +YV+ G P V TD + A G+K ++ C + YK +E +H+ R+ ++A A TE F G W L+ ++
Sbjct: 273 DVIQQDCTLGTNKYGLALSIIVGVNGDSKTRMFCQALLEREDTEAFSWFFVHYVKMV---GGHYPFVCFTDRLSSQAIGVK-AQACERNQQCKYAGYKLYQEA--RHIAAQEMF----RSLMQRASRAPTEASFQGAWKGLLDAL 407
BLAST of mRNA_P-wetherbeei_contig19072.1.1 vs. uniprot
Match: A0A015IJG7_RHIIW (SWIM-type domain-containing protein n=1 Tax=Rhizophagus irregularis (strain DAOM 197198w) TaxID=1432141 RepID=A0A015IJG7_RHIIW) HSP 1 Score: 76.3 bits (186), Expect = 6.310e-12 Identity = 36/114 (31.58%), Postives = 62/114 (54.39%), Query Frame = 1
Query: 13 QVIIQDNTFGTNRFGLPFFVIVCIDGDARTRVICQGFLRKEDTAAFTWAFENYVRWCCDAGSCRPGVILTDDAKAAAAGIKKTMPITKHFLCSWHLYKNLKEQTDKHLRGDADL 354
VI+ D T TNR+ + + V +D + +TR++ Q + E+ A F W + ++ + + P V+ TD A A ++ P T+H LC +HL++N+K++ LRGD L
Sbjct: 229 DVIVYDTTSKTNRYEMVLSLFVAVDNNYKTRIVAQALTKYENQADFNWILQCTLQ---ASNNLSPRVLFTDSDLAIIAAVQVVYPQTRHLLCIYHLFENVKKKAKSKLRGDMAL 339
BLAST of mRNA_P-wetherbeei_contig19072.1.1 vs. uniprot
Match: A0A444XRF2_ARAHY (Protein FAR1-RELATED SEQUENCE n=1 Tax=Arachis hypogaea TaxID=3818 RepID=A0A444XRF2_ARAHY) HSP 1 Score: 71.2 bits (173), Expect = 1.200e-10 Identity = 36/108 (33.33%), Postives = 60/108 (55.56%), Query Frame = 1
Query: 1 ESCGQVIIQDNTFGTNRFGLPFFVIVCIDGDARTRVICQGFLRKEDTAAFTWAFENYVRWCCDAGSCRPGV-ILTDDAKAAAAGIKKTMPITKHFLCSWHLYKNLKEQ 321
E G V+ D T+ TNR+ +PF V ++ ++ ++ L E+ + F W F+ ++R D +P + ILTD KA IKK++P+T+H C WH+ K + E+
Sbjct: 35 EHFGDVMSFDTTYLTNRYDMPFASFVGVNHHGQSLLLGCAILSCEEESYFLWLFDCWIRCIGD----KPSIGILTDQCKAMRNAIKKSLPMTQHRWCIWHILKKISEK 138
BLAST of mRNA_P-wetherbeei_contig19072.1.1 vs. uniprot
Match: UPI0019D5D764 (protein FAR1-RELATED SEQUENCE 5-like n=1 Tax=Panicum virgatum TaxID=38727 RepID=UPI0019D5D764) HSP 1 Score: 71.6 bits (174), Expect = 2.230e-10 Identity = 39/119 (32.77%), Postives = 56/119 (47.06%), Query Frame = 1
Query: 1 ESCGQVIIQDNTFGTNRFGLPFFVIVCIDGDARTRVICQGFLRKEDTAAFTWAFENYVRWCCDAGSCRPGVILTDDAKAAAAGIKKTMPITKHFLCSWHLYKNLKEQ-----TDKHLRG 342
E G I D TF TN++ +PF +IV I+G A+ + L + F W F+ +V +P +I+TD A I MP H LC WH+ KN+ E+ + KH G
Sbjct: 417 ELYGDFISFDTTFSTNKYNMPFALIVGINGHAKNVIFGCALLEDQTAETFEWVFKTFVETM---NGKKPKIIMTDQDAAMKKAIADFMPDVIHRLCIWHIMKNILEKCGSFMSQKHREG 532
BLAST of mRNA_P-wetherbeei_contig19072.1.1 vs. uniprot
Match: UPI00098ADE8C (protein FAR1-RELATED SEQUENCE 5-like n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=UPI00098ADE8C) HSP 1 Score: 70.9 bits (172), Expect = 3.150e-10 Identity = 43/139 (30.94%), Postives = 65/139 (46.76%), Query Frame = 1
Query: 10 GQVIIQDNTFGTNRFGLPFFVIVCIDGDARTRVICQGFLRKEDTAAFTWAFENYVRWCCDAGSCRPGVILTDDAKAAAAGIKKTMPITKHFLCSWHLYKNLKEQTDKHLRGDADLLRACRAAFRKAEYAATEEEFGGCW 426
G V++ DNT+ NR+G+PF V ++ T V + E A + W +++ C RP ++TD A I+K + H LCSWH+ KN++ KHL + L+ RA YA T + F W
Sbjct: 285 GDVVVFDNTYKMNRYGMPFIPFVGLNNHRCTTVFACAIVSDETEATYVWLLNTFLKANCQK---RPKSVITDGDAAMIRAIRKVLSDVWHRLCSWHIEKNMQ----KHLNHKS--LKEFRALLY---YATTYKVFEERW 411
BLAST of mRNA_P-wetherbeei_contig19072.1.1 vs. uniprot
Match: UPI0019D552B3 (protein FAR1-RELATED SEQUENCE 5-like n=1 Tax=Panicum virgatum TaxID=38727 RepID=UPI0019D552B3) HSP 1 Score: 70.9 bits (172), Expect = 3.660e-10 Identity = 38/116 (32.76%), Postives = 53/116 (45.69%), Query Frame = 1
Query: 10 GQVIIQDNTFGTNRFGLPFFVIVCIDGDARTRVICQGFLRKEDTAAFTWAFENYVRWCCDAGSCRPGVILTDDAKAAAAGIKKTMPITKHFLCSWHLYKNLKEQ-----TDKHLRG 342
G I D TF TNR+ +PF +IV I+G + + + + F W F +V +P +I+TD A I MP H LC WH+ KNL E+ + KH G
Sbjct: 378 GDFISFDTTFSTNRYNMPFALIVGINGHGKNVIFGCALIEDQTAETFEWVFRTFVETMSGK---KPKIIMTDQDAAMKKAIANYMPDVIHRLCIWHIMKNLHEKCGCFMSQKHREG 490
BLAST of mRNA_P-wetherbeei_contig19072.1.1 vs. uniprot
Match: A0A835Z0Q7_9STRA (SWIM-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0Q7_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 5.150e-10 Identity = 29/55 (52.73%), Postives = 41/55 (74.55%), Query Frame = 1
Query: 13 QVIIQDNTFGTNRFGLPFFVIVCIDGDARTRVICQGFLRKEDTAAFTWAFENYVR 177
VI QD TFGTN++GL +IV ++GD++TR+ CQ L +EDT AF+W F +YV+
Sbjct: 96 DVIQQDCTFGTNKYGLALSIIVGVNGDSKTRMFCQALLEREDTEAFSWFFVHYVK 150
BLAST of mRNA_P-wetherbeei_contig19072.1.1 vs. uniprot
Match: A0A836CA74_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA74_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 5.770e-10 Identity = 29/55 (52.73%), Postives = 41/55 (74.55%), Query Frame = 1
Query: 13 QVIIQDNTFGTNRFGLPFFVIVCIDGDARTRVICQGFLRKEDTAAFTWAFENYVR 177
VI QD TFGTN++GL +IV ++GD++TR+ CQ L +EDT AF+W F +YV+
Sbjct: 221 DVIQQDCTFGTNKYGLALSIIVGVNGDSKTRMFCQALLEREDTEAFSWFFVHYVK 275
BLAST of mRNA_P-wetherbeei_contig19072.1.1 vs. uniprot
Match: A0A0F7ZZT1_9HYPO (MULE domain-containing protein n=1 Tax=Hirsutella minnesotensis 3608 TaxID=1043627 RepID=A0A0F7ZZT1_9HYPO) HSP 1 Score: 69.3 bits (168), Expect = 1.180e-9 Identity = 52/180 (28.89%), Postives = 71/180 (39.44%), Query Frame = 1
Query: 13 QVIIQDNTFGTNRFGLPFFVIVCIDGDARTRVICQGFLRKEDTAAFTWAFENYVRWCCDAGSCR--------PGVILTDDAKAAAAGIKKTMPITKHFLCSWHLYKNLKEQTDKHLRGD------------------------------ADLLRACRAAFRKAEYAATEEEFGGCWDDLM 438
+++ D T TNR+GL I I + + +EDTAAFTW FE W R P VI+TD A A + T P + +C+WH+ KN+ KH +GD AD + AAF+ YA T EEF W+ L+
Sbjct: 7 HLMMADVTNNTNRYGLKLLEINGITSLGTIFPLAFCLMPREDTAAFTWCFEQLRDWMTAEARQRELADDAFIPHVIITDYDAAERAALAATFPEAQLQVCTWHIMKNIATHARKHWQGDDDDPFELNREEIQRGEDPGPWTARPGQAKPADFI----AAFQSVLYAPTAEEFDDRWNALI 182
BLAST of mRNA_P-wetherbeei_contig19072.1.1 vs. uniprot
Match: A0A2N9IWN9_FAGSY (Protein FAR1-RELATED SEQUENCE n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9IWN9_FAGSY) HSP 1 Score: 68.9 bits (167), Expect = 1.330e-9 Identity = 42/144 (29.17%), Postives = 70/144 (48.61%), Query Frame = 1
Query: 10 GQVIIQDNTFGTNRFGLPFFVIVCIDGDARTRVICQGFLRKEDTAAFTWAFENYVRWCCDAGSCR-PGVILTDDAKAAAAGIKKTMPITKHFLCSWHLYKNLKEQTDKHLRGDADLLRACRAAFRKAEYAATEEEFGGCWDDLM 438
G V+ D+T+ TN++ LPF V++ ++ +T V G L E A+TW + + DA + + P ++TD +A I P H LCSWHL +N K+ H+ A A +A + T ++F W+ ++
Sbjct: 261 GDVVAFDSTYKTNKYNLPFVVLIGVNHHHQTIVFGSGLLNVETEEAYTWLLQAFH----DAMNNKSPVSVVTDGDRAMRNAINTVFPNANHRLCSWHLARNAKQ----HINNSA----ALQAFHKLMNDIQTRDQFEEKWNSMI 392 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19072.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig19072.1.1 >prot_P-wetherbeei_contig19072.1.1 ID=prot_P-wetherbeei_contig19072.1.1|Name=mRNA_P-wetherbeei_contig19072.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=90bp MPITKHFLCSWHLYKNLKEQTDKHLRGDADLLRACRAAFRKAEYAATEEEback to top mRNA from alignment at P-wetherbeei_contig19072:249..1200+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig19072.1.1 ID=mRNA_P-wetherbeei_contig19072.1.1|Name=mRNA_P-wetherbeei_contig19072.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=952bp|location=Sequence derived from alignment at P-wetherbeei_contig19072:249..1200+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig19072:249..1200+ >mRNA_P-wetherbeei_contig19072.1.1 ID=mRNA_P-wetherbeei_contig19072.1.1|Name=mRNA_P-wetherbeei_contig19072.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=270bp|location=Sequence derived from alignment at P-wetherbeei_contig19072:249..1200+ (Phaeothamnion wetherbeei SAG_119_79)back to top |