mRNA_P-wetherbeei_contig18906.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig18906.1.2 vs. uniprot
Match: D8LFB8_ECTSI (Protein SDA1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFB8_ECTSI) HSP 1 Score: 248 bits (633), Expect = 1.420e-73 Identity = 138/265 (52.08%), Postives = 161/265 (60.75%), Query Frame = 1
Query: 1 FFPQDKPLRQMLYEYIVADIRNVNRKGHNEKLNKALHALMYTMIGDASEVAAKRSLDVIVELYRRRVWTDARTVNAVAAALHSERTKLCCTALNFFLNIDGQMADDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGLFPAIMLLQDPQGTAEKVFRRLRQSNERFEVKLLMMNFVSRLVGAHRLLLLPLYSHLQRYLTSHQREVTKILAFVVQGCHDLVPP 795
F QDK LR MLY++IV DI+++N KG N KLNK + L++TM+ D SE+AAK+SLD++V LYR+RVW DARTVN +A AL ++ KL CTALNFFLNID MADD GGLFPAI LL DPQGT EKVFRRLRQS +RFEVKLLMMNF+SR+VGAHRLLLLP YSHLQRY+ S QREVT ILA++VQ CHDLVPP
Sbjct: 131 FHCQDKMLRVMLYDHIVNDIKSINEKGRNPKLNKTIQNLVFTMLKDDSEIAAKKSLDIMVVLYRKRVWVDARTVNVIATALLADTPKLACTALNFFLNIDTMMADDDDEEGKAETAQAQVNTHEHSKKTAKRARSVQKQVKTNKKKNKAALSDESN----------------------GGLFPAINLLHDPQGTVEKVFRRLRQSKQRFEVKLLMMNFISRVVGAHRLLLLPFYSHLQRYVASQQREVTHILAYLVQACHDLVPP 373
BLAST of mRNA_P-wetherbeei_contig18906.1.2 vs. uniprot
Match: A0A835Z7A4_9STRA (Protein SDA1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7A4_9STRA) HSP 1 Score: 236 bits (603), Expect = 7.700e-70 Identity = 132/262 (50.38%), Postives = 159/262 (60.69%), Query Frame = 1
Query: 10 QDKPLRQMLYEYIVADIRNVNRKGHNEKLNKALHALMYTMIGDASEVAAKRSLDVIVELYRRRVWTDARTVNAVAAALHSERTKLCCTALNFFLNIDGQMADDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGLFPAIMLLQDPQGTAEKVFRRLRQSNERFEVKLLMMNFVSRLVGAHRLLLLPLYSHLQRYLTSHQREVTKILAFVVQGCHDLVPP 795
QDK LRQ+L+++ V+DIR +N K NEK+N+ L A MYTM+ D SE AAK+SLDV+VELY+RRVWTDARTVN +AAAL S TKL TALNFFL+ID +M ++ GLFPAI LL DPQGTAEKVF+RLR S+ERFEVKLLMMNF+SR++ AH+LL+LP YS LQRY+ SHQREVT ILA++VQ CH LVPP
Sbjct: 134 QDKSLRQLLFDHTVSDIRAINLKARNEKMNRTLQAFMYTMLQDESETAAKKSLDVMVELYKRRVWTDARTVNVIAAALDSSVTKLVTTALNFFLSIDAKMEEEEDADEAEGKRAPEVEMHQHAKKTSAIARKIKKQVKERKKKLNAVDEEK------------------------AGLFPAINLLNDPQGTAEKVFKRLRGSSERFEVKLLMMNFISRIISAHQLLMLPFYSFLQRYIQSHQREVTHILAYLVQACHPLVPP 371
BLAST of mRNA_P-wetherbeei_contig18906.1.2 vs. uniprot
Match: I2CP60_NANGC (Protein SDA1 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CP60_NANGC) HSP 1 Score: 206 bits (523), Expect = 1.730e-59 Identity = 139/261 (53.26%), Postives = 175/261 (67.05%), Query Frame = 1
Query: 13 DKPLRQMLYEYIVADIRNVNRKGHNEKLNKALHALMYTMIGDASEVAAKRSLDVIVELYRRRVWTDARTVNAVAAALHSERTKLCCTALNFFLNIDGQMADDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGLFPAIMLLQDPQGTAEKVFRRLRQSNERFEVKLLMMNFVSRLVGAHRLLLLPLYSHLQRYLTSHQREVTKILAFVVQGCHDLVPP 795
DK LR+MLY Y+++DIR +N K NE+LNK L MY M+ D VAAKRSL+ +VELYRRRVWTD RTVN +A+A S T+L A++FFL I+ +MADD XXXXXXXXXXXXXXXXXXXXXXXXXX LFPAI +L DPQG AEK+F++L+ SNERFEV+LL M+F+SRL+G H+L+LL Y ++QRYL+S+Q+ VTK LA+++QGCHDL+PP
Sbjct: 142 DKSLREMLYTYVISDIRGLNSKARNERLNKELQGFMYIMLKDEHSVAAKRSLEAMVELYRRRVWTDPRTVNVIASACLSNSTRLSLMAVHFFLGIEQRMADDEEEELAVGKEAXXXXXXXXXXXXXXXXXXXXXXXXXXKRKELLRRLQGEGGDGGKEGGHSP-------------LFPAIQMLHDPQGLAEKLFKKLKMSNERFEVRLLYMDFLSRLLGLHKLMLLNFYPYVQRYLSSNQQHVTKTLAYLIQGCHDLIPP 389
BLAST of mRNA_P-wetherbeei_contig18906.1.2 vs. uniprot
Match: A0A7S3Y5R9_HETAK (Protein SDA1 (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y5R9_HETAK) HSP 1 Score: 198 bits (503), Expect = 1.380e-56 Identity = 113/262 (43.13%), Postives = 151/262 (57.63%), Query Frame = 1
Query: 13 DKPLRQMLYEYIVADIRNVNRKGHNEKLNKALHALMYTMIG-DASEVAAKRSLDVIVELYRRRVWTDARTVNAVAAALHSERTKLCCTALNFFLNIDGQMADDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGLFPAIMLLQDPQGTAEKVFRRLRQSNERFEVKLLMMNFVSRLVGAHRLLLLPLYSHLQRYLTSHQREVTKILAFVVQGCHDLVPP 795
DK LRQ+L+++IVAD++ VN K +E LN+ L +Y M+G +ASE+AAK+SL+V+VELYRRRVWTDARTVNA+A + S KL ++NFFL ID ++ADD LFPAI LL DPQG AE+ F L+++++RFEV+LL MNF+SR++ HRLLLLP Y++LQRY+T Q VT+ILA++VQGCH+LVPP
Sbjct: 111 DKNLRQLLFDHIVADVKMVNLKKKDEALNRQLQGFLYKMVGAEASEIAAKKSLEVLVELYRRRVWTDARTVNAIAQGVASPVAKLMVLSMNFFLGIDRKIADDDAAGSLYEPEQVQTHQHSKKTAKRARHVEKQKAGNRRRRLAKEAGKGAPEP-----------------------LFPAINLLHDPQGLAERAFASLKKADQRFEVRLLQMNFISRVLAHHRLLLLPFYTYLQRYVTGKQEHVTQILAYLVQGCHELVPP 349
BLAST of mRNA_P-wetherbeei_contig18906.1.2 vs. uniprot
Match: A0A7S3M8Q0_9STRA (Protein SDA1 (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M8Q0_9STRA) HSP 1 Score: 192 bits (488), Expect = 2.800e-54 Identity = 102/265 (38.49%), Postives = 148/265 (55.85%), Query Frame = 1
Query: 1 FFPQDKPLRQMLYEYIVADIRNVNRKGHNEKLNKALHALMYTMIGDASEVAAKRSLDVIVELYRRRVWTDARTVNAVAAALHSERTKLCCTALNFFLNIDGQMADDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGLFPAIMLLQDPQGTAEKVFRRLRQSNERFEVKLLMMNFVSRLVGAHRLLLLPLYSHLQRYLTSHQREVTKILAFVVQGCHDLVPP 795
F DK LR L EYI DI+ +N + N+KLN+++ A +++++ + + + A+++++++ ELYRR++WTDARTVN + A S T++ A+NFFL I+ +M +D LFPAI +L DPQ AEK+F++LRQS ERFEVKLL+MNFVSRL+G H+LLLL YS LQRYLTSHQ+++T ILA+++QGCH+L+PP
Sbjct: 127 FSVTDKTLRSSLVEYIFNDIKTINHQKQNDKLNRSIQAFLFSVVEEDTTITARKTVEILCELYRRKIWTDARTVNMIGKACLSPSTRVTVAAVNFFLGIENKMHEDEEEEKASGDKTPADVNYHSHSKKTKKRARVVQKQIEHNAKLRRDSQKESSTTTP--------------------LFPAIQMLHDPQSLAEKLFKKLRQSGERFEVKLLLMNFVSRLIGCHKLLLLSFYSFLQRYLTSHQQDITLILAYLIQGCHELIPP 371
BLAST of mRNA_P-wetherbeei_contig18906.1.2 vs. uniprot
Match: A0A7S2CST8_9STRA (Protein SDA1 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CST8_9STRA) HSP 1 Score: 189 bits (481), Expect = 1.360e-52 Identity = 114/264 (43.18%), Postives = 145/264 (54.92%), Query Frame = 1
Query: 10 QDKPLRQMLYEYIVADIRNVNRKGHNEK-LNKALHALMYTMIG-DASEVAAKRSLDVIVELYRRRVWTDARTVNAVAAALHSERTKLCCTALNFFLNIDGQMADDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGLFPAIMLLQDPQGTAEKVFRRLRQSNERFEVKLLMMNFVSRLVGAHRLLLLPLYSHLQRYLTSHQREVTKILAFVVQGCHDLVPP 795
QDK LR ++ +I+ DIR N G N+ NK + AL+++MI + SE+ AK+SLDV+VELYRRR+WTD TVN +AA S+ TK+ TALNFFL I+ +MADD LFPA+ LL DPQG AE +FR+LR SNERFEVKLL MN VSRL+G+H+LLLL YS QRYLTSHQ+ VT++L+++VQ H LVPP
Sbjct: 49 QDKTLRALMCTHIINDIRKRNTSGGNKNNFNKKVQALLFSMIRQEDSEMRAKKSLDVVVELYRRRIWTDGATVNTIAAGCTSKHTKIMVTALNFFLGIESKMADDDDETAVDTNALEVKEHRHSRKTLSRAHRTERQTKWKEKKIRDLDNKAPQ------------------------ALFPALQLLNDPQGLAEGLFRKLRGSNERFEVKLLAMNMVSRLIGSHQLLLLSFYSFTQRYLTSHQKHVTQVLSYLVQASHPLVPP 288
BLAST of mRNA_P-wetherbeei_contig18906.1.2 vs. uniprot
Match: A0A3L6VCH0_9STRA (Protein SDA1 n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6VCH0_9STRA) HSP 1 Score: 180 bits (457), Expect = 4.670e-50 Identity = 116/263 (44.11%), Postives = 151/263 (57.41%), Query Frame = 1
Query: 13 DKPLRQMLYEYIVADIRNVNRKG--HNEKLNKALHALMYTMIGDASEVAAKRSLDVIVELYRRRVWTDARTVNAVAAALHSERTKLCCTALNFFLNIDGQMADDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGLFPAIMLLQDPQGTAEKVFRRLRQSNERFEVKLLMMNFVSRLVGAHRLLLLPLYSHLQRYLTSHQREVTKILAFVVQGCHDLVPP 795
DK LR+++Y +IV DI+ ++ G NEK+ + L MY+M+ D E+AA +SL V+V LYR+R+W DARTVN +A A S+ T++ TA+ FFL ID + +D XXXXXXXXXXX G FPAI LL DPQG AEK R L+ SNERFEV+LLMM+F+ RLVG H+L+LL Y LQRYLT+HQ++VT ILA++VQ CHD +PP
Sbjct: 129 DKRLRELVYSHIVYDIKKMHTDGGGRNEKVMRGLQNFMYSMVADEHEIAAIKSLHVLVSLYRKRIWCDARTVNCIATACTSKNTRVLVTAIQFFLGIDADILEDDEAEKVXXXXXXXXXXXSYSKKTKSRYNHTKSQLVKNRKARKRNAEHD-------------------------GTFPAIDLLNDPQGVAEKQLRILKASNERFEVRLLMMDFIGRLVGQHKLVLLAFYPLLQRYLTAHQQKVTNILAYLVQACHDEIPP 366
BLAST of mRNA_P-wetherbeei_contig18906.1.2 vs. uniprot
Match: A0A2R5GCF0_9STRA (Protein SDA1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GCF0_9STRA) HSP 1 Score: 184 bits (468), Expect = 9.340e-50 Identity = 115/268 (42.91%), Postives = 151/268 (56.34%), Query Frame = 1
Query: 10 QDKPLRQMLYEYIVADIRNVNRKGHNEKLNKALHALMYTMIGDASEVAAKRSLDVIVELYRRRVWTDARTVNAVAAALHSERTKLCCTALNFFLNIDGQM-------ADDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGLFPAIMLLQDPQGTAEKVFRRLRQSNERFEVKLLMMNFVSRLVGAHRLLLLPLYSHLQRYLTSHQREVTKILAFVVQGCHDLVP 792
QDK LR++LY +IVAD+RNVN+K N KLN+A+ ++Y+M+ D S +AAKRSL V+V+LY+RRVWTD RTVN +A A S + K L FFL ID ++ DD XXXXXXXXX FPAI L+ DPQG +EK+F++LR S + FEV+LLMMN +SR+VG H+L++L YS +QRYL HQR VT ILA+++Q H+LVP
Sbjct: 120 QDKTLRELLYTHIVADVRNVNKKASNHKLNRAIQNVVYSMLEDPSSIAAKRSLQVMVDLYKRRVWTDGRTVNVIAEACLSNQPKNVAIGLQFFLGIDEKIDALQDDEEDDAIEDALQASTGKTRDKLERGAQKTSRMYSKKTRARLRKKEKDEKALXXXXXXXXXAREAGNAGTSSERRRIAAPRFPAIDLISDPQGFSEKLFKKLRGSRDHFEVRLLMMNLISRIVGHHKLIMLSFYSFVQRYLQPHQRHVTNILAYLIQASHELVP 387
BLAST of mRNA_P-wetherbeei_contig18906.1.2 vs. uniprot
Match: K3WVT4_GLOUD (Protein SDA1 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WVT4_GLOUD) HSP 1 Score: 177 bits (450), Expect = 2.780e-49 Identity = 102/261 (39.08%), Postives = 139/261 (53.26%), Query Frame = 1
Query: 13 DKPLRQMLYEYIVADIRNVNRKGHNEKLNKALHALMYTMIGDASEVAAKRSLDVIVELYRRRVWTDARTVNAVAAALHSERTKLCCTALNFFLNIDGQMADDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGLFPAIMLLQDPQGTAEKVFRRLRQSNERFEVKLLMMNFVSRLVGAHRLLLLPLYSHLQRYLTSHQREVTKILAFVVQGCHDLVPP 795
DK LR++LY++IV+DIR +N N K+NKAL ++ M+ D +E AA +SL V+V+L++R+VW D R+VN +A A S+ TKL +LNFFL ID + +D FPAI +L DPQG AEK F+ L+ ERFEVKLLMMNF+ R++G H+L+LLP Y LQRYL SHQ+ VT++LA++VQ CHD +PP
Sbjct: 133 DKRLRELLYKHIVSDIRQLNATSKNVKVNKALQNFLFDMLQDENEHAALKSLQVLVDLFKRKVWHDQRSVNVIATACTSKNTKLLVMSLNFFLGIDDDILEDEENQKKEKKALIEVDYHSHSKKTKKRHRDTVSALKKNKRARKRDIEFQ-------------------------ATFPAIEMLNDPQGVAEKQFKVLKGCTERFEVKLLMMNFIGRVLGFHKLVLLPYYPLLQRYLQSHQQNVTQVLAYLVQSCHDEIPP 368
BLAST of mRNA_P-wetherbeei_contig18906.1.2 vs. uniprot
Match: R7T4X4_CAPTE (Protein SDA1 n=1 Tax=Capitella teleta TaxID=283909 RepID=R7T4X4_CAPTE) HSP 1 Score: 181 bits (459), Expect = 5.220e-49 Identity = 108/262 (41.22%), Postives = 133/262 (50.76%), Query Frame = 1
Query: 10 QDKPLRQMLYEYIVADIRNVNRKGHNEKLNKALHALMYTMIGDASEVAAKRSLDVIVELYRRRVWTDARTVNAVAAALHSERTKLCCTALNFFLNIDGQMADDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGLFPAIMLLQDPQGTAEKVFRRLRQSNERFEVKLLMMNFVSRLVGAHRLLLLPLYSHLQRYLTSHQREVTKILAFVVQGCHDLVPP 795
QDK LR+ LY YIV DI+NVN+K N KLN L M+TM+ D++ AAK SLDV++ELYRR +W DA+TVN + AL S+ TK+ AL FFL +D ADD F AI L+ DPQ +EK+F+ L +SNERFEVKL MMN +SRLVG H+L L Y +QR+L HQR+VTKIL F Q HDLVPP
Sbjct: 131 QDKVLRKTLYNYIVQDIKNVNQKHRNMKLNVTLQNFMFTMLRDSNATAAKMSLDVMIELYRRNIWKDAKTVNVIVTALFSKVTKILMGALQFFLGVDEDTADDESSSEDEGAKSQKDILLAHRVGKKTKKRQKTMDKALTALKKHKKKRKPAAFN-----------------------FSAIHLINDPQDLSEKLFKVLEKSNERFEVKLCMMNLISRLVGIHKLFLFNFYPFIQRFLQPHQRDVTKILLFSAQSSHDLVPP 369 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18906.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig18906.1.2 >prot_P-wetherbeei_contig18906.1.2 ID=prot_P-wetherbeei_contig18906.1.2|Name=mRNA_P-wetherbeei_contig18906.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=255bp MLYEYIVADIRNVNRKGHNEKLNKALHALMYTMIGDASEVAAKRSLDVIVback to top mRNA from alignment at P-wetherbeei_contig18906:40..1074- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig18906.1.2 ID=mRNA_P-wetherbeei_contig18906.1.2|Name=mRNA_P-wetherbeei_contig18906.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1035bp|location=Sequence derived from alignment at P-wetherbeei_contig18906:40..1074- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig18906:40..1074- >mRNA_P-wetherbeei_contig18906.1.2 ID=mRNA_P-wetherbeei_contig18906.1.2|Name=mRNA_P-wetherbeei_contig18906.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=765bp|location=Sequence derived from alignment at P-wetherbeei_contig18906:40..1074- (Phaeothamnion wetherbeei SAG_119_79)back to top |