mRNA_P-wetherbeei_contig18893.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig18893.2.1 vs. uniprot
Match: A0A0U5MJC9_9PROT (Uncharacterized protein n=1 Tax=Magnetospirillum sp. XM-1 TaxID=1663591 RepID=A0A0U5MJC9_9PROT) HSP 1 Score: 90.9 bits (224), Expect = 7.810e-23 Identity = 49/63 (77.78%), Postives = 51/63 (80.95%), Query Frame = 1
Query: 4 FLTLFVATHVSILTSDTSSSPRGSAFAGLRNAPLPRAVELHIRSFGGWLNPRYIFRAGTL-DQ 189
FLTLFVATHVSILTSDTSS+ AFAGLRNAPLPRA+ LH RSFG WL PRYIF A L DQ
Sbjct: 2 FLTLFVATHVSILTSDTSSASHDDAFAGLRNAPLPRAL-LHTRSFGAWLEPRYIFGARQLLDQ 63
BLAST of mRNA_P-wetherbeei_contig18893.2.1 vs. uniprot
Match: G8APH4_9PROT (Uncharacterized protein n=2 Tax=Azospirillum TaxID=191 RepID=G8APH4_9PROT) HSP 1 Score: 65.9 bits (159), Expect = 6.090e-13 Identity = 39/64 (60.94%), Postives = 42/64 (65.62%), Query Frame = 1
Query: 4 FLTLFVATHVSILTSDTSSSPRGS---AFAGLRNAPLPRAVELHIRSFGGWLNPRYIFRAGTLD 186
FLTLFVATHVSILTSDTS PRG A+ LR + HIRSFG L PRYIF AG L+
Sbjct: 2 FLTLFVATHVSILTSDTSRHPRGDPSQAYGTLRY----HVIRDHIRSFGTRLEPRYIFGAGRLN 61
BLAST of mRNA_P-wetherbeei_contig18893.2.1 vs. uniprot
Match: UPI001E6402C8 (hypothetical protein n=1 Tax=Candidatus Paracaedibacter symbiosus TaxID=244582 RepID=UPI001E6402C8) HSP 1 Score: 57.8 bits (138), Expect = 1.020e-9 Identity = 34/52 (65.38%), Postives = 37/52 (71.15%), Query Frame = 2
Query: 8 SHS-LSLLMSAFSLPIPPAALAGLPSQAYGTLRYHVQ*NC-TSAASVDGLIP 157
SH+ L+LLMS F+LPIPPAAL PSQAYGTLRY V T AASV G P
Sbjct: 13 SHNPLTLLMSTFALPIPPAALTSPPSQAYGTLRYRVNAYALTPAASVHGFSP 64
BLAST of mRNA_P-wetherbeei_contig18893.2.1 vs. uniprot
Match: E0XT19_9PROT (Uncharacterized protein n=1 Tax=uncultured alpha proteobacterium HF0130_06E21 TaxID=710808 RepID=E0XT19_9PROT) HSP 1 Score: 52.0 bits (123), Expect = 1.820e-7 Identity = 29/51 (56.86%), Postives = 31/51 (60.78%), Query Frame = 3
Query: 3 VSHTLCRYSCQHSHFRYLQQPSRVCLRRLTERSA--TTCSRTAHPQLRWMA 149
VSHTL RYSCQHSHFRYLQ SR L T+ AHPQ RW+A
Sbjct: 12 VSHTLYRYSCQHSHFRYLQHLSRDTFAGLRNAPLPRTSSVEIAHPQFRWIA 62
BLAST of mRNA_P-wetherbeei_contig18893.2.1 vs. uniprot
Match: A0A1Q9C0X1_SYMMI (Uncharacterized protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9C0X1_SYMMI) HSP 1 Score: 55.1 bits (131), Expect = 2.640e-7 Identity = 32/55 (58.18%), Postives = 37/55 (67.27%), Query Frame = 2
Query: 5 FSHSLSLLMSAFSLPIPPAALAGLPSQAYGTLRYHVQ*NCTSAASVDGLIPVTFS 169
FS LSLLMSAF+L IPP AL GLPSQAYGTLR+ + +A S+D T S
Sbjct: 15 FSLPLSLLMSAFALVIPPGALTGLPSQAYGTLRHRPK----AARSIDSKTSFTRS 65
BLAST of mRNA_P-wetherbeei_contig18893.2.1 vs. uniprot
Match: A0A6A5KV19_LUPAL (Uncharacterized protein n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5KV19_LUPAL) HSP 1 Score: 54.3 bits (129), Expect = 5.590e-7 Identity = 32/59 (54.24%), Postives = 39/59 (66.10%), Query Frame = 3
Query: 3 VSHTLCRYSCQHSHFRYLQQPSRVCLRRLTERSATTCSRTAHPQLRWMA*SPLHFPRRN 179
VSH L RYSCQHSHFRYLQ+PS + T + S +PQLR MA +PLHF R++
Sbjct: 285 VSHPLYRYSCQHSHFRYLQRPSTGPPSQ-TYGTLRYHSSKRNPQLRCMALAPLHFRRKD 342
BLAST of mRNA_P-wetherbeei_contig18893.2.1 vs. uniprot
Match: Q3BKI0_9PROT (Uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense TaxID=55518 RepID=Q3BKI0_9PROT) HSP 1 Score: 52.0 bits (123), Expect = 1.120e-6 Identity = 22/23 (95.65%), Postives = 23/23 (100.00%), Query Frame = 3
Query: 3 VSHTLCRYSCQHSHFRYLQQPSR 71
VSHTLCRYSCQHSHFRYLQ+PSR
Sbjct: 128 VSHTLCRYSCQHSHFRYLQRPSR 150
BLAST of mRNA_P-wetherbeei_contig18893.2.1 vs. uniprot
Match: A0A0D0GNS6_9BURK (Uncharacterized protein n=1 Tax=Burkholderia sp. MSHR3999 TaxID=1542965 RepID=A0A0D0GNS6_9BURK) HSP 1 Score: 52.0 bits (123), Expect = 1.600e-6 Identity = 31/57 (54.39%), Postives = 37/57 (64.91%), Query Frame = 2
Query: 8 SHSLSLLMSAFSLPIPPAALAGLPSQAYGTLRYHVQ*NCTSAASVDGLIPVTFSAQE 178
S LSLLMSAF+LPIP + L PSQAYGTL YH + + + L PVT SAQ+
Sbjct: 110 SPPLSLLMSAFALPIPSSTLYKAPSQAYGTLSYHARLARIRSFGI-WLSPVTSSAQD 165
BLAST of mRNA_P-wetherbeei_contig18893.2.1 vs. uniprot
Match: E0XS38_9PROT (Uncharacterized protein (Fragment) n=1 Tax=uncultured alpha proteobacterium HF0070_14E07 TaxID=710804 RepID=E0XS38_9PROT) HSP 1 Score: 50.1 bits (118), Expect = 5.160e-6 Identity = 21/22 (95.45%), Postives = 21/22 (95.45%), Query Frame = 3
Query: 3 VSHTLCRYSCQHSHFRYLQQPS 68
VSHTLCRYSCQHSHFRYLQ PS
Sbjct: 50 VSHTLCRYSCQHSHFRYLQHPS 71
BLAST of mRNA_P-wetherbeei_contig18893.2.1 vs. uniprot
Match: A0A7J6JS32_9INSE (Uncharacterized protein n=1 Tax=Ephemera danica TaxID=1049336 RepID=A0A7J6JS32_9INSE) HSP 1 Score: 50.8 bits (120), Expect = 8.700e-6 Identity = 31/59 (52.54%), Postives = 34/59 (57.63%), Query Frame = 1
Query: 10 TLFVATHVSILTSDTSSSPRGSAFAGLRNAPLPRAVELHIRSFGGWLNPRYIFRAGTLD 186
T F+ATHVSI TSD SS + R LP + IRSFG PRYIFRAG LD
Sbjct: 212 TPFIATHVSIRTSDISSILYKTPSQTYRT--LPYHILTDIRSFGAQFEPRYIFRAGRLD 268 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18893.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig18893.2.1 >prot_P-wetherbeei_contig18893.2.1 ID=prot_P-wetherbeei_contig18893.2.1|Name=mRNA_P-wetherbeei_contig18893.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=64bp VFLTLFVATHVSILTSDTSSSPRGSAFAGLRNAPLPRAVELHIRSFGGWLback to top mRNA from alignment at P-wetherbeei_contig18893:436..627+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig18893.2.1 ID=mRNA_P-wetherbeei_contig18893.2.1|Name=mRNA_P-wetherbeei_contig18893.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=192bp|location=Sequence derived from alignment at P-wetherbeei_contig18893:436..627+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig18893:436..627+ >mRNA_P-wetherbeei_contig18893.2.1 ID=mRNA_P-wetherbeei_contig18893.2.1|Name=mRNA_P-wetherbeei_contig18893.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=192bp|location=Sequence derived from alignment at P-wetherbeei_contig18893:436..627+ (Phaeothamnion wetherbeei SAG_119_79)back to top |