mRNA_P-wetherbeei_contig18883.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig18883.1.1 vs. uniprot
Match: D8LK91_ECTSI (Sulfotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK91_ECTSI) HSP 1 Score: 105 bits (261), Expect = 7.500e-25 Identity = 50/102 (49.02%), Postives = 66/102 (64.71%), Query Frame = 1
Query: 1 LNALVDASVARTEQQRCNVAFIKTHKTASTTLASILYRYGARHDKAIAQFSRRGTTVDLPLGITDVENGNAPRPDIIHYHHVWDGNLKKDTWAGVRQKYLKV 306
LN LVD SVA T+ Q CN+AF+KTHKTASTT A++LYRYG RHD +A F ++++LP I D + D++HYHH WDG + WA + Y K+
Sbjct: 10 LNLLVDESVAATKNQTCNIAFVKTHKTASTTAATLLYRYGKRHDLNVAHFHGHQSSIELPEAIED----SGKPVDLMHYHHAWDG-FYEGGWAEAKAAYKKI 106
BLAST of mRNA_P-wetherbeei_contig18883.1.1 vs. uniprot
Match: D7FX25_ECTSI (Sulfotransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX25_ECTSI) HSP 1 Score: 105 bits (263), Expect = 1.370e-24 Identity = 55/109 (50.46%), Postives = 67/109 (61.47%), Query Frame = 1
Query: 1 LNALVDASVARTEQQRCNVAFIKTHKTASTTLASILYRYGARHDKAIAQFSRRGTTVDLPLGITDVENGNAPRPDIIHYHHVWDGNLKKDTWAGVRQKYLKVCTKEMSV 327
LN LV S ++ +Q N+AFIKTHKTASTTLASILYRYG RHD IA+F + GT VDL + V R DI+HYHH W+G TW KY K+ + + V
Sbjct: 147 LNGLVYDSASKRTEQLSNIAFIKTHKTASTTLASILYRYGMRHDSNIAKFDQGGTYVDLDVASKQVAK-QGKRVDIMHYHHAWNG-FYSGTWDQATAKYAKIMSNQADV 253
BLAST of mRNA_P-wetherbeei_contig18883.1.1 vs. uniprot
Match: A0A6H5KIJ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIJ9_9PHAE) HSP 1 Score: 101 bits (251), Expect = 9.680e-23 Identity = 50/103 (48.54%), Postives = 66/103 (64.08%), Query Frame = 1
Query: 1 LNALVDASVARTEQQRCNVAFIKTHKTASTTLASILYRYGARHDKAIAQFSRRGTTVDLPLGITDV-ENGNAPRPDIIHYHHVWDGNLKKDTWAGVRQKYLKV 306
LN LV A+V R Q CN+ F+KTHKTASTT+ ++LYRYG RH + +A+F GT V L + E+GN R DI HYHHVW+G + TWA R+ + +
Sbjct: 210 LNGLVAAAVERQRGQECNLVFVKTHKTASTTITAVLYRYGLRHGRRVARFKVEGTAVTLEHAAEETKESGN--RVDIFHYHHVWNGYFES-TWARARELFKDI 309
BLAST of mRNA_P-wetherbeei_contig18883.1.1 vs. uniprot
Match: D8LI80_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI80_ECTSI) HSP 1 Score: 98.2 bits (243), Expect = 1.000e-21 Identity = 50/97 (51.55%), Postives = 63/97 (64.95%), Query Frame = 1
Query: 1 LNALVDASVARTEQQRCNVAFIKTHKTASTTLASILYRYGARHDKAIAQFSRRGTTVDLPLGITDV-ENGNAPRPDIIHYHHVWDGNLKKDTWAGVR 288
LN LV A+V R Q CNVAF+KTHKTASTT+ ++LYRYG RH + +A+F GT V L + E+GN R DI HYH+VW+G + TW R
Sbjct: 155 LNGLVAAAVERQRGQECNVAFVKTHKTASTTITAVLYRYGLRHGRRVARFKVEGTAVTLEHAAEETKESGN--RVDIFHYHYVWNGYFES-TWEKAR 248
BLAST of mRNA_P-wetherbeei_contig18883.1.1 vs. uniprot
Match: A0A6H5JVG3_9PHAE (ST protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVG3_9PHAE) HSP 1 Score: 83.2 bits (204), Expect = 1.530e-16 Identity = 44/95 (46.32%), Postives = 59/95 (62.11%), Query Frame = 1
Query: 1 LNALVDASVARTEQQRCNVAFIKTHKTASTTLASILYRYGARHDKAIAQFSRRGTT-VDLPLGITDVENGNAPRPDIIHYH---HVWDGNLKKDT 273
LN +V S +T Q+CNVAF+KTHKTASTTLA I RY RHDK +A F R + V L + + V+ + R D++HYH VW+G + +T
Sbjct: 98 LNLMVTESAGKTGGQKCNVAFVKTHKTASTTLAMIFVRYAKRHDKKLASFEGRFVSNVPLAVAVQQVQE-SGQRVDVMHYHVHEGVWEGTWEDNT 191
BLAST of mRNA_P-wetherbeei_contig18883.1.1 vs. uniprot
Match: A0A6H5JL02_9PHAE (ST protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL02_9PHAE) HSP 1 Score: 81.6 bits (200), Expect = 7.990e-16 Identity = 43/103 (41.75%), Postives = 59/103 (57.28%), Query Frame = 1
Query: 1 LNALVDASVARTEQQRCNVAFIKTHKTASTTLASILYRYGARHDKAIAQFS-RRGTTVDLPLGITDVENGNAPRPDIIHYHHVWDGNLKKDTWAGVRQKYLKV 306
LN LV+ + A T QQ CN+AF KTHKTASTT+A IL RY RHD +A F + + L + +E + R D++HYH+ G+ WA + Y K+
Sbjct: 209 LNGLVEETAAATGQQACNLAFAKTHKTASTTMAMILVRYARRHDMKLASFGGNHVSAIPLTEAVQQIEE-SGERVDVMHYHYTTYGSFD-GRWAEAKAMYEKI 309
BLAST of mRNA_P-wetherbeei_contig18883.1.1 vs. uniprot
Match: D7G4H5_ECTSI (Sulfotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4H5_ECTSI) HSP 1 Score: 80.5 bits (197), Expect = 8.760e-16 Identity = 43/92 (46.74%), Postives = 56/92 (60.87%), Query Frame = 1
Query: 10 LVDASVARTEQQRCNVAFIKTHKTASTTLASILYRYGARHDKAIAQFSRRGTT-VDLPLGITDVENGNAPRPDIIHYH---HVWDGNLKKDT 273
+V S +T Q CNVAF+KTHKTASTTLA I RY RHDK +A F R + V L + + V+ N R D++HYH VW+G + +T
Sbjct: 1 MVTESAGKTGGQMCNVAFVKTHKTASTTLAMIFVRYAKRHDKKLASFEGRFVSNVPLAVAVQQVQE-NGQRVDVMHYHVHEGVWEGTWEDNT 91
BLAST of mRNA_P-wetherbeei_contig18883.1.1 vs. uniprot
Match: D7FI84_ECTSI (Sulfotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI84_ECTSI) HSP 1 Score: 79.3 bits (194), Expect = 3.030e-15 Identity = 42/103 (40.78%), Postives = 58/103 (56.31%), Query Frame = 1
Query: 1 LNALVDASVARTEQQRCNVAFIKTHKTASTTLASILYRYGARHDKAIAQFS-RRGTTVDLPLGITDVENGNAPRPDIIHYHHVWDGNLKKDTWAGVRQKYLKV 306
LN LV+ + T QQ CN+AF KTHKTASTT+A IL RY RHD +A F + + L + +E + R D++HYH+ G+ WA + Y K+
Sbjct: 20 LNGLVEETAEATGQQACNLAFAKTHKTASTTMAMILVRYARRHDMKLASFGGNHVSAIPLTEAVQQIEE-SGERVDVMHYHYTAYGSFD-GRWAEAKAMYEKI 120
BLAST of mRNA_P-wetherbeei_contig18883.1.1 vs. uniprot
Match: D8LRU8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRU8_ECTSI) HSP 1 Score: 77.4 bits (189), Expect = 2.090e-14 Identity = 43/103 (41.75%), Postives = 56/103 (54.37%), Query Frame = 1
Query: 1 LNALVDASVARTEQQRCNVAFIKTHKTASTTLASILYRYGARHDKAIAQFSRRGTTVDLPLGITDVENGNAP-RPDIIHYHHVWDGNLKKDTWAGVRQKYLKV 306
LN LV S A+TE Q N+AFIKTHKTASTT A +LYRY RH+ +A F + + L + E R DI+HYH G + +W Q Y ++
Sbjct: 84 LNNLVANSAAQTEGQLSNIAFIKTHKTASTTFAFLLYRYARRHNVKLAHFDDHNSAIPLREAVQQTEGRQGKGRCDIMHYHVSAFGQFE-GSWRQAEQAYRRI 185
BLAST of mRNA_P-wetherbeei_contig18883.1.1 vs. uniprot
Match: A0A6H5L8E6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8E6_9PHAE) HSP 1 Score: 70.9 bits (172), Expect = 3.930e-12 Identity = 38/103 (36.89%), Postives = 53/103 (51.46%), Query Frame = 1
Query: 1 LNALVDASVARTEQQRCNVAFIKTHKTASTTLASILYRYGARHDKAIAQFSR-RGTTVDLPLGITDVENGNAPRPDIIHYHHVWDGNLKKDTWAGVRQKYLKV 306
LN LV+AS + Q NV F+KTHKT STTLA++ YRY RH +A F + +GT +L T + D++HYH G TW + ++
Sbjct: 39 LNDLVEASARDADNQVANVVFVKTHKTGSTTLAAVFYRYAVRHKLKLAHFGKGKGTIANLKKAATQTRK-SGELVDVMHYHISHSGEYT-GTWPQAENYFRRI 139 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18883.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig18883.1.1 >prot_P-wetherbeei_contig18883.1.1 ID=prot_P-wetherbeei_contig18883.1.1|Name=mRNA_P-wetherbeei_contig18883.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=109bp LNALVDASVARTEQQRCNVAFIKTHKTASTTLASILYRYGARHDKAIAQFback to top mRNA from alignment at P-wetherbeei_contig18883:580..1099+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig18883.1.1 ID=mRNA_P-wetherbeei_contig18883.1.1|Name=mRNA_P-wetherbeei_contig18883.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=520bp|location=Sequence derived from alignment at P-wetherbeei_contig18883:580..1099+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig18883:580..1099+ >mRNA_P-wetherbeei_contig18883.1.1 ID=mRNA_P-wetherbeei_contig18883.1.1|Name=mRNA_P-wetherbeei_contig18883.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=327bp|location=Sequence derived from alignment at P-wetherbeei_contig18883:580..1099+ (Phaeothamnion wetherbeei SAG_119_79)back to top |