mRNA_P-wetherbeei_contig18883.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig18883.1.1
Unique NamemRNA_P-wetherbeei_contig18883.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig18883.1.1 vs. uniprot
Match: D8LK91_ECTSI (Sulfotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK91_ECTSI)

HSP 1 Score: 105 bits (261), Expect = 7.500e-25
Identity = 50/102 (49.02%), Postives = 66/102 (64.71%), Query Frame = 1
Query:    1 LNALVDASVARTEQQRCNVAFIKTHKTASTTLASILYRYGARHDKAIAQFSRRGTTVDLPLGITDVENGNAPRPDIIHYHHVWDGNLKKDTWAGVRQKYLKV 306
            LN LVD SVA T+ Q CN+AF+KTHKTASTT A++LYRYG RHD  +A F    ++++LP  I D    +    D++HYHH WDG   +  WA  +  Y K+
Sbjct:   10 LNLLVDESVAATKNQTCNIAFVKTHKTASTTAATLLYRYGKRHDLNVAHFHGHQSSIELPEAIED----SGKPVDLMHYHHAWDG-FYEGGWAEAKAAYKKI 106          
BLAST of mRNA_P-wetherbeei_contig18883.1.1 vs. uniprot
Match: D7FX25_ECTSI (Sulfotransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX25_ECTSI)

HSP 1 Score: 105 bits (263), Expect = 1.370e-24
Identity = 55/109 (50.46%), Postives = 67/109 (61.47%), Query Frame = 1
Query:    1 LNALVDASVARTEQQRCNVAFIKTHKTASTTLASILYRYGARHDKAIAQFSRRGTTVDLPLGITDVENGNAPRPDIIHYHHVWDGNLKKDTWAGVRQKYLKVCTKEMSV 327
            LN LV  S ++  +Q  N+AFIKTHKTASTTLASILYRYG RHD  IA+F + GT VDL +    V      R DI+HYHH W+G     TW     KY K+ + +  V
Sbjct:  147 LNGLVYDSASKRTEQLSNIAFIKTHKTASTTLASILYRYGMRHDSNIAKFDQGGTYVDLDVASKQVAK-QGKRVDIMHYHHAWNG-FYSGTWDQATAKYAKIMSNQADV 253          
BLAST of mRNA_P-wetherbeei_contig18883.1.1 vs. uniprot
Match: A0A6H5KIJ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIJ9_9PHAE)

HSP 1 Score: 101 bits (251), Expect = 9.680e-23
Identity = 50/103 (48.54%), Postives = 66/103 (64.08%), Query Frame = 1
Query:    1 LNALVDASVARTEQQRCNVAFIKTHKTASTTLASILYRYGARHDKAIAQFSRRGTTVDLPLGITDV-ENGNAPRPDIIHYHHVWDGNLKKDTWAGVRQKYLKV 306
            LN LV A+V R   Q CN+ F+KTHKTASTT+ ++LYRYG RH + +A+F   GT V L     +  E+GN  R DI HYHHVW+G  +  TWA  R+ +  +
Sbjct:  210 LNGLVAAAVERQRGQECNLVFVKTHKTASTTITAVLYRYGLRHGRRVARFKVEGTAVTLEHAAEETKESGN--RVDIFHYHHVWNGYFES-TWARARELFKDI 309          
BLAST of mRNA_P-wetherbeei_contig18883.1.1 vs. uniprot
Match: D8LI80_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI80_ECTSI)

HSP 1 Score: 98.2 bits (243), Expect = 1.000e-21
Identity = 50/97 (51.55%), Postives = 63/97 (64.95%), Query Frame = 1
Query:    1 LNALVDASVARTEQQRCNVAFIKTHKTASTTLASILYRYGARHDKAIAQFSRRGTTVDLPLGITDV-ENGNAPRPDIIHYHHVWDGNLKKDTWAGVR 288
            LN LV A+V R   Q CNVAF+KTHKTASTT+ ++LYRYG RH + +A+F   GT V L     +  E+GN  R DI HYH+VW+G  +  TW   R
Sbjct:  155 LNGLVAAAVERQRGQECNVAFVKTHKTASTTITAVLYRYGLRHGRRVARFKVEGTAVTLEHAAEETKESGN--RVDIFHYHYVWNGYFES-TWEKAR 248          
BLAST of mRNA_P-wetherbeei_contig18883.1.1 vs. uniprot
Match: A0A6H5JVG3_9PHAE (ST protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVG3_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 1.530e-16
Identity = 44/95 (46.32%), Postives = 59/95 (62.11%), Query Frame = 1
Query:    1 LNALVDASVARTEQQRCNVAFIKTHKTASTTLASILYRYGARHDKAIAQFSRRGTT-VDLPLGITDVENGNAPRPDIIHYH---HVWDGNLKKDT 273
            LN +V  S  +T  Q+CNVAF+KTHKTASTTLA I  RY  RHDK +A F  R  + V L + +  V+  +  R D++HYH    VW+G  + +T
Sbjct:   98 LNLMVTESAGKTGGQKCNVAFVKTHKTASTTLAMIFVRYAKRHDKKLASFEGRFVSNVPLAVAVQQVQE-SGQRVDVMHYHVHEGVWEGTWEDNT 191          
BLAST of mRNA_P-wetherbeei_contig18883.1.1 vs. uniprot
Match: A0A6H5JL02_9PHAE (ST protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL02_9PHAE)

HSP 1 Score: 81.6 bits (200), Expect = 7.990e-16
Identity = 43/103 (41.75%), Postives = 59/103 (57.28%), Query Frame = 1
Query:    1 LNALVDASVARTEQQRCNVAFIKTHKTASTTLASILYRYGARHDKAIAQFS-RRGTTVDLPLGITDVENGNAPRPDIIHYHHVWDGNLKKDTWAGVRQKYLKV 306
            LN LV+ + A T QQ CN+AF KTHKTASTT+A IL RY  RHD  +A F     + + L   +  +E  +  R D++HYH+   G+     WA  +  Y K+
Sbjct:  209 LNGLVEETAAATGQQACNLAFAKTHKTASTTMAMILVRYARRHDMKLASFGGNHVSAIPLTEAVQQIEE-SGERVDVMHYHYTTYGSFD-GRWAEAKAMYEKI 309          
BLAST of mRNA_P-wetherbeei_contig18883.1.1 vs. uniprot
Match: D7G4H5_ECTSI (Sulfotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4H5_ECTSI)

HSP 1 Score: 80.5 bits (197), Expect = 8.760e-16
Identity = 43/92 (46.74%), Postives = 56/92 (60.87%), Query Frame = 1
Query:   10 LVDASVARTEQQRCNVAFIKTHKTASTTLASILYRYGARHDKAIAQFSRRGTT-VDLPLGITDVENGNAPRPDIIHYH---HVWDGNLKKDT 273
            +V  S  +T  Q CNVAF+KTHKTASTTLA I  RY  RHDK +A F  R  + V L + +  V+  N  R D++HYH    VW+G  + +T
Sbjct:    1 MVTESAGKTGGQMCNVAFVKTHKTASTTLAMIFVRYAKRHDKKLASFEGRFVSNVPLAVAVQQVQE-NGQRVDVMHYHVHEGVWEGTWEDNT 91          
BLAST of mRNA_P-wetherbeei_contig18883.1.1 vs. uniprot
Match: D7FI84_ECTSI (Sulfotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI84_ECTSI)

HSP 1 Score: 79.3 bits (194), Expect = 3.030e-15
Identity = 42/103 (40.78%), Postives = 58/103 (56.31%), Query Frame = 1
Query:    1 LNALVDASVARTEQQRCNVAFIKTHKTASTTLASILYRYGARHDKAIAQFS-RRGTTVDLPLGITDVENGNAPRPDIIHYHHVWDGNLKKDTWAGVRQKYLKV 306
            LN LV+ +   T QQ CN+AF KTHKTASTT+A IL RY  RHD  +A F     + + L   +  +E  +  R D++HYH+   G+     WA  +  Y K+
Sbjct:   20 LNGLVEETAEATGQQACNLAFAKTHKTASTTMAMILVRYARRHDMKLASFGGNHVSAIPLTEAVQQIEE-SGERVDVMHYHYTAYGSFD-GRWAEAKAMYEKI 120          
BLAST of mRNA_P-wetherbeei_contig18883.1.1 vs. uniprot
Match: D8LRU8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRU8_ECTSI)

HSP 1 Score: 77.4 bits (189), Expect = 2.090e-14
Identity = 43/103 (41.75%), Postives = 56/103 (54.37%), Query Frame = 1
Query:    1 LNALVDASVARTEQQRCNVAFIKTHKTASTTLASILYRYGARHDKAIAQFSRRGTTVDLPLGITDVENGNAP-RPDIIHYHHVWDGNLKKDTWAGVRQKYLKV 306
            LN LV  S A+TE Q  N+AFIKTHKTASTT A +LYRY  RH+  +A F    + + L   +   E      R DI+HYH    G  +  +W    Q Y ++
Sbjct:   84 LNNLVANSAAQTEGQLSNIAFIKTHKTASTTFAFLLYRYARRHNVKLAHFDDHNSAIPLREAVQQTEGRQGKGRCDIMHYHVSAFGQFE-GSWRQAEQAYRRI 185          
BLAST of mRNA_P-wetherbeei_contig18883.1.1 vs. uniprot
Match: A0A6H5L8E6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8E6_9PHAE)

HSP 1 Score: 70.9 bits (172), Expect = 3.930e-12
Identity = 38/103 (36.89%), Postives = 53/103 (51.46%), Query Frame = 1
Query:    1 LNALVDASVARTEQQRCNVAFIKTHKTASTTLASILYRYGARHDKAIAQFSR-RGTTVDLPLGITDVENGNAPRPDIIHYHHVWDGNLKKDTWAGVRQKYLKV 306
            LN LV+AS    + Q  NV F+KTHKT STTLA++ YRY  RH   +A F + +GT  +L    T     +    D++HYH    G     TW      + ++
Sbjct:   39 LNDLVEASARDADNQVANVVFVKTHKTGSTTLAAVFYRYAVRHKLKLAHFGKGKGTIANLKKAATQTRK-SGELVDVMHYHISHSGEYT-GTWPQAENYFRRI 139          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18883.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
D8LK91_ECTSI7.500e-2549.02Sulfotransferase n=1 Tax=Ectocarpus siliculosus Ta... [more]
D7FX25_ECTSI1.370e-2450.46Sulfotransferase n=2 Tax=Ectocarpus TaxID=2879 Rep... [more]
A0A6H5KIJ9_9PHAE9.680e-2348.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LI80_ECTSI1.000e-2151.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JVG3_9PHAE1.530e-1646.32ST protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Tax... [more]
A0A6H5JL02_9PHAE7.990e-1641.75ST protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Tax... [more]
D7G4H5_ECTSI8.760e-1646.74Sulfotransferase n=1 Tax=Ectocarpus siliculosus Ta... [more]
D7FI84_ECTSI3.030e-1540.78Sulfotransferase n=1 Tax=Ectocarpus siliculosus Ta... [more]
D8LRU8_ECTSI2.090e-1441.75Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5L8E6_9PHAE3.930e-1236.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig18883contigP-wetherbeei_contig18883:580..1099 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FX25
Preferred nameGAL3ST3
PFAMsGal-3-0_sulfotr
Model size327
Max annot lvl2759|Eukaryota
KEGG rclassRC00007,RC00231
KEGG koko:K01019,ko:K09676
KEGG ReactionR04017,R05105,R10805
KEGG Pathwayko00565,ko00600,ko01100,map00565,map00600,map01100
KEGG ModuleM00067
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005975,GO:0005976,GO:0005996,GO:0006022,GO:0006029,GO:0006790,GO:0006807,GO:0008146,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009311,GO:0009987,GO:0016020,GO:0016021,GO:0016740,GO:0016782,GO:0017076,GO:0019538,GO:0030166,GO:0030246,GO:0030309,GO:0030554,GO:0031224,GO:0032553,GO:0032555,GO:0032559,GO:0034645,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044281,GO:0044425,GO:0050656,GO:0050694,GO:0050698,GO:0071704,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901681
Exons2
Evalue2.25e-25
EggNOG OGs2CM97@1|root,2QPNT@2759|Eukaryota
EC2.8.2.11
Descriptiongalactosylceramide sulfotransferase activity
Cds size327
COG categoryS
BRITEko00000,ko00001,ko00002,ko01000,ko01003
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186157.663364-CDS-P-wetherbeei_contig18883:579..7771683186157.663364-CDS-P-wetherbeei_contig18883:579..777Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig18883 580..777 +
1683186157.6731677-CDS-P-wetherbeei_contig18883:970..10991683186157.6731677-CDS-P-wetherbeei_contig18883:970..1099Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig18883 971..1099 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig18883.1.1prot_P-wetherbeei_contig18883.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig18883 580..1099 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig18883.1.1

>prot_P-wetherbeei_contig18883.1.1 ID=prot_P-wetherbeei_contig18883.1.1|Name=mRNA_P-wetherbeei_contig18883.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=109bp
LNALVDASVARTEQQRCNVAFIKTHKTASTTLASILYRYGARHDKAIAQF
SRRGTTVDLPLGITDVENGNAPRPDIIHYHHVWDGNLKKDTWAGVRQKYL
KVCTKEMSV
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mRNA from alignment at P-wetherbeei_contig18883:580..1099+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig18883.1.1 ID=mRNA_P-wetherbeei_contig18883.1.1|Name=mRNA_P-wetherbeei_contig18883.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=520bp|location=Sequence derived from alignment at P-wetherbeei_contig18883:580..1099+ (Phaeothamnion wetherbeei SAG_119_79)
CTCAATGCCCTGGTTGACGCCTCGGTGGCACGCACGGAACAGCAACGATG TAACGTAGCGTTCATCAAGACACACAAAACGGCGTCGACCACCCTGGCAT CCATTCTGTATCGGTATGGCGCGCGGCACGACAAGGCGATCGCGCAATTT TCGCGGCGCGGTACCACTGTGGACCTTCCCTTGGGCATCACTGACGTGGT ACGCGGGTGGAACCGCTTTCTGCAAGCAGCCTGCATTTTCCCACCTGATT GAGTTCAGAACTTGTGCAATCTTGTCAACGCATGTTCTTTAATAAATGAG CCACTACCTCCTATCGTTCTCTTGTTGCTCCTTCTGATTTTAATCCTTTG CCCTCGTATTCTTCCAAGCGCTGCCAACGTCTCCTTCACAGGAAAACGGT AATGCGCCGCGGCCTGACATAATCCACTACCACCACGTGTGGGACGGCAA CTTGAAGAAAGATACATGGGCGGGGGTGCGGCAAAAGTATTTGAAGGTAT GTACAAAAGAAATGAGTGTT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig18883:580..1099+

>mRNA_P-wetherbeei_contig18883.1.1 ID=mRNA_P-wetherbeei_contig18883.1.1|Name=mRNA_P-wetherbeei_contig18883.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=327bp|location=Sequence derived from alignment at P-wetherbeei_contig18883:580..1099+ (Phaeothamnion wetherbeei SAG_119_79)
CTCAATGCCCTGGTTGACGCCTCGGTGGCACGCACGGAACAGCAACGATG
TAACGTAGCGTTCATCAAGACACACAAAACGGCGTCGACCACCCTGGCAT
CCATTCTGTATCGGTATGGCGCGCGGCACGACAAGGCGATCGCGCAATTT
TCGCGGCGCGGTACCACTGTGGACCTTCCCTTGGGCATCACTGACGTGGA
AAACGGTAATGCGCCGCGGCCTGACATAATCCACTACCACCACGTGTGGG
ACGGCAACTTGAAGAAAGATACATGGGCGGGGGTGCGGCAAAAGTATTTG
AAGGTATGTACAAAAGAAATGAGTGTT
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