mRNA_P-wetherbeei_contig18630.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig18630.1.1 vs. uniprot
Match: A0A835YH58_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YH58_9STRA) HSP 1 Score: 260 bits (665), Expect = 1.850e-82 Identity = 145/268 (54.10%), Postives = 183/268 (68.28%), Query Frame = 1
Query: 31 QVYDKGLSPYGSLRTAFGAIVRAEGWTALYQGLGPALIGNGVSWGGYFFAYEHAKRLMRRRSTTGELGSTHHLAAGMAAGTVMVFLTNPIWLIKTRMQLQSREFFGSGSSGAAAAPRPYAGVADALRTIVKEEGALALYKGVVPALVLCGQGALQFMAYEWMKERLPRH-DVNTPGESLAMGGASKIFASLVTYPYQVVIKSRLQQRLTAKEAARGAPR--YRGMLHCAAVIARCEGPRGFFKGCVAYAVRAAPASAITFVVYEESMK 825
Q Y +G SPY SL +AF I EGW ALY GL P++ G G++WG YF+ Y+ +K ++ + +L +HHL AG ++V L NP+WL+KTR+QLQ+R+ + RPY G DAL TI +EEGALALYKG+VPA++L QGALQF AYEW+K +PR + P ESL MGG SKIFAS+VTYP QV IK+RLQ R A +A A R Y G CAA+I R EG RGFF+GCV YA+RAAPASA+TFVVYEE+M+
Sbjct: 77 QAYHQGASPYASLSSAFKTIAEQEGWRALYAGLVPSVWGGGLAWGAYFYLYQMSKDALQTGTGAEQLNVSHHLTAG----NILVLLGNPVWLVKTRLQLQTRD------NTQRLGRRPYRGFTDALVTIAREEGALALYKGIVPAMLLSTQGALQFAAYEWLKGWVPRDLQQSKPVESLVMGGGSKIFASVVTYPTQV-IKTRLQDRAAAAVSAAAAGRSIYTGTAQCAALIWRQEGARGFFRGCVPYALRAAPASAVTFVVYEEAMR 333
BLAST of mRNA_P-wetherbeei_contig18630.1.1 vs. uniprot
Match: A0A836CHG8_9STRA (Folate transporter (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHG8_9STRA) HSP 1 Score: 238 bits (606), Expect = 5.740e-75 Identity = 125/195 (64.10%), Postives = 144/195 (73.85%), Query Frame = 1
Query: 31 QVYDKGLSPYGSLRTAFGAIVRAEGWTALYQGLGPALIGNGVSWGGYFFAYEHAKRLMRRRSTTGELGSTHHLAAGMAAGTVMVFLTNPIWLIKTRMQLQSREFFGSGSSGAAAAPRPYAGVADALRTIVKEEGALALYKGVVPALVLCGQGALQFMAYEWMKERLPRHDV-NTPGESLAMGGASKIFASLVTYP 612
Q YDKG SPY SL AF IV+ GW+ LY GLGPA++G+GVSWGGYF+ YE AK MRR S T +LG HHL AGMAAG +V LTNPIWL+KTRMQLQ AAA RPY G++DA+ TIV+EEGALALYKGVVPAL+L GQGALQF AYEW+K R+PR+ N P ESL MG +SK+FASLV P
Sbjct: 28 QAYDKGKSPYRSLGAAFTTIVKQNGWSGLYSGLGPAVLGSGVSWGGYFYLYEWAKTSMRRFSDTEKLGPVHHLTAGMAAGNALVLLTNPIWLVKTRMQLQQXXXXXXT---AAAGRRPYTGLSDAVATIVREEGALALYKGVVPALLLSGQGALQFAAYEWLKARVPRNLAQNDPHESLLMGASSKVFASLVRTP 219
BLAST of mRNA_P-wetherbeei_contig18630.1.1 vs. uniprot
Match: D7FQB8_ECTSI (Folate transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQB8_ECTSI) HSP 1 Score: 236 bits (602), Expect = 4.540e-74 Identity = 119/197 (60.41%), Postives = 144/197 (73.10%), Query Frame = 1
Query: 31 QVYDKGLSPYGSLRTAFGAIVRAEGWTALYQGLGPALIGNGVSWGGYFFAYEHAKRLMRRR-STTGELGSTHHLAAGMAAGTVMVFLTNPIWLIKTRMQLQSREFFGSGSSGAAAAPRPYAGVADALRTIVKEEGALALYKGVVPALVLCGQGALQFMAYEWMKERLPRHDVNTPGESLAMGGASKIFASLVTYPYQ 618
QVYDKG SPY SL TAF I+R EG ALYQGLGPAL+GN V+WGG+F+ YE K +R R +LG+ HHL AG AG +MV TNP+W+IKTRMQLQ ++ G RPY+G+ DA+RTI +EEG LALYKG VPAL+LCGQGA+QF YEW+K R+P+ + NTP ESL MGGASKI ++LVTYP Q
Sbjct: 70 QVYDKGPSPYKSLGTAFRTIIREEGARALYQGLGPALLGNAVAWGGFFYCYEKIKTAIRARVPQEADLGAVHHLGAGYVAGAMMVLATNPVWMIKTRMQLQDKKAKSGGV-------RPYSGLMDAVRTITREEGPLALYKGAVPALMLCGQGAVQFAVYEWLKARVPKRNENTPQESLLMGGASKILSTLVTYPTQ 259
BLAST of mRNA_P-wetherbeei_contig18630.1.1 vs. uniprot
Match: W7T4J3_9STRA (Mitochondrial folate transporter carrier-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T4J3_9STRA) HSP 1 Score: 215 bits (547), Expect = 8.560e-64 Identity = 132/280 (47.14%), Postives = 172/280 (61.43%), Query Frame = 1
Query: 16 IPISNQVYDKGLSPYGSLRTAFGAIVRAEGWTALYQGLGPALIGNGVSWGGYFFAYEHAKRLMRRRSTTGELGSTHHLAAGMAAGTVMVFLTNPIWLIKTRMQLQSREFFGSGS-SGAAAAPR------------PYAGVADALRTIVKEEGALALYKGVVPALVLCGQGALQFMAYEWMKERLPRHDVNTPGESLAMGGASKIFASLVTYPYQVVIKSRLQQRLTAKEAARGAPRYRGMLHCAAVIARCEGPRGFFKGCVAYAVRAAPASAITFVVYEE 816
I + QVYD+ P+ S+ +IV+ EG+ LY+GL PAL+ NG+SWGGYF+ YEHAK R+ ++ S HHL + AG +MVFLTNP+WLIKTRMQLQ S + A AP Y GV ALRTIV+EEG L LYKG++PAL+L GA+QF+ YEW+K+ + + S+ +GG +KI A LVTYP QVV K+RLQQR T A+R RY C I R EG GFFKGC+ ++ AP++ ITF+VYE+
Sbjct: 99 IKVHLQVYDRAGRPFPSMYKGMQSIVQQEGYRGLYKGLTPALLANGLSWGGYFYFYEHAKNRYLRQHR--QITSVHHLLSAFEAGIIMVFLTNPLWLIKTRMQLQPGGASALESMTKAVTAPIVASTASHLGKQIAYTGVTQALRTIVREEGVLGLYKGILPALLLTSHGAIQFVTYEWLKKVVEPYQAPVFSFSV-LGGMAKILAGLVTYPPQVV-KARLQQRDTG--ASRW--RYTSTWDCVLKIWRFEGLLGFFKGCLPNVLKTAPSAVITFLVYEQ 370
BLAST of mRNA_P-wetherbeei_contig18630.1.1 vs. uniprot
Match: B5YLY4_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YLY4_THAPS) HSP 1 Score: 190 bits (482), Expect = 1.200e-55 Identity = 120/257 (46.69%), Postives = 151/257 (58.75%), Query Frame = 1
Query: 88 IVRAEGWTALYQGLGPALIGNGVSWGGYFFAYEHAKRLMRRRSTTGELGSTHHLAAGMAAGTVMVFLTNPIWLIKTRMQLQSREFFG--SGSSGAAAAPRPYAGVADALRTIVKEEGALALYKGVVPALVLCGQGALQFMAYEWMKERLPRHDVNTPGESL-------AMGGASKIFASLVTYPYQVVIKSRLQQRLTAKEAARGAPRYRGMLHCAAVIARCEGPRGFFKGCVAYAVRAAPASAITFVVYEESMKAL 831
++R EG+ LY+GL PA+IG+ SWGG+F YE K++M +R + L +G MV LTNP+WLIKTR+QLQ+ S +G P PY G+ A TIVKEEG LALYKG VPAL+L G +QF++YEW+K + T GE L MG SK AS TYP QV IK+RLQQR + Y G++ C I R EG GFFKGCV A+R AP++AITFVVYE + AL
Sbjct: 45 VIRTEGYAGLYKGLTPAIIGSAASWGGFFILYEEMKQVMLQRKIK---FANAALDTSCLSGACMVALTNPLWLIKTRLQLQNSRLQQQLSQPNGPPLKP-PYRGLVHAAFTIVKEEGVLALYKGSVPALMLVSHGGIQFVSYEWLKGHFAAWN-RTIGERLRASFGYLVMGATSKFIASTTTYPLQV-IKARLQQRSQRE--------YSGVIDCVGKIWRNEGVGGFFKGCVTNALRVAPSAAITFVVYESVLDAL 287
BLAST of mRNA_P-wetherbeei_contig18630.1.1 vs. uniprot
Match: A0A176WGD1_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176WGD1_MARPO) HSP 1 Score: 189 bits (480), Expect = 3.560e-55 Identity = 125/282 (44.33%), Postives = 158/282 (56.03%), Query Frame = 1
Query: 28 NQVYDKGLSPYGSLRTAFGAIVRAEGWTALYQGLGPALIGNGVSWGGYFFAYEHAKRLMRRRSTTGELGSTHHLAAGMAAGTVMVFLTNPIWLIKTRMQLQSREFFGSGSSGAAAAPRPYAGVADALRTIVKEEGALALYKGVVPALVLCGQGALQFMAYEWMKE--------RLPRHDVNTPGESLA------MGGASKIFASLVTYPYQVVIKSRLQQRLTAKEAARGAPRYRGMLHCAAVIARCEGPRGFFKGCVAYAVRAAPASAITFVVYEESMKAL 831
N + + Y S A I R EG LY GL PALIG+ VSWG YF Y +AK + GELG HL + + AG+++ +TNP+WL+KTR+QLQ+ G G+ +PY GVADALR+IV+EEG LYKG+ P L+L GALQFMAYE M++ R+P HD + LA +G ASKIFA TYPY VV +SR+QQR K G Y G R EG RG +KG +R P+S+ITFVVYE +K L
Sbjct: 36 NDGRNASIPSYKSTIHALSTIGRIEGLRGLYAGLTPALIGSSVSWGAYFLFYSNAKARYQGM-VNGELGPVLHLISAVEAGSLVCLVTNPLWLVKTRLQLQAP---GHGTQ------KPYTGVADALRSIVREEGLRGLYKGLGPGLLLVSHGALQFMAYEEMQKFLLASRSKRVPDHDSDGAAPKLASVDFAVLGAASKIFALFCTYPYSVV-RSRIQQRPDDK----GVASYVGGWQALKKTFRYEGVRGLYKGLSPALIRTVPSSSITFVVYESVLKFL 302
BLAST of mRNA_P-wetherbeei_contig18630.1.1 vs. uniprot
Match: FOLT1_ARATH (Folate transporter 1, chloroplastic n=35 Tax=Brassicaceae TaxID=3700 RepID=FOLT1_ARATH) HSP 1 Score: 188 bits (477), Expect = 1.150e-54 Identity = 120/272 (44.12%), Postives = 155/272 (56.99%), Query Frame = 1
Query: 49 LSPYGSLRTAFGAIVRAEGWTALYQGLGPALIGNGVSWGGYFFAYEHAKRLMRRRSTTGELGSTHHLAAGMAAGTVMVFLTNPIWLIKTRMQLQSREFFGSGSSGAAAAPRPYAGVADALRTIVKEEGALALYKGVVPALVLCGQGALQFMAYEWM-------KERLPRHDVN----TPGESLAMGGASKIFASLVTYPYQVVIKSRLQQRLTAKEAARGAPRYRGMLHCAAVIARCEGPRGFFKGCVAYAVRAAPASAITFVVYEESMKAL 831
L Y + A I R EG LY G PA+IG+ VSWG YFF Y AK+ R +L HLA+ AG ++ TNPIWL+KTR+QLQ+ +PY+G+ DA RTIVKEEG ALYKG+VP LVL GA+QF AYE + KER + + + A+GG+SK+ A L+TYP+QV I++RLQQR + G PRY LH AR EG RGF++G A ++ PAS+ITF+VYE +K L
Sbjct: 44 LPTYKNTAHAVFTIARLEGLRGLYAGFFPAVIGSTVSWGLYFFFYGRAKQRYARGRDDEKLSPALHLASAAEAGALVCLCTNPIWLVKTRLQLQTPLH----------QTQPYSGLLDAFRTIVKEEGPRALYKGIVPGLVLVSHGAIQFTAYEELRKIIVDLKERRRKSESTDNLLNSADYAALGGSSKVAAVLLTYPFQV-IRARLQQR----PSTNGIPRYIDSLHVIRETARYEGLRGFYRGLTANLLKNVPASSITFIVYENVLKLL 300
BLAST of mRNA_P-wetherbeei_contig18630.1.1 vs. uniprot
Match: A0A7S1ZHN0_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZHN0_9STRA) HSP 1 Score: 189 bits (481), Expect = 2.910e-54 Identity = 131/309 (42.39%), Postives = 161/309 (52.10%), Query Frame = 1
Query: 49 LSPYGSLRTAFGAIVRAEGWTALYQGLGPALIGNGVSWGGYFFAYEHAKRLMRRRSTTG-------ELGSTHHLAAGMAAGTVMVFLTNPIWLIKTRMQLQSREFFGSGSSG---------AAAAPRPYAGVADALRTIVKEEGALALYKGVVPALVLCGQGALQFMAYEWMKER--------LPRHDVNTPGES------------------LAMGGASKIFASLVTYPYQVVIKSRLQQRLTAKEAARGAP------RYRGMLHCAAVIARCEGPRGFFKGCVAYAVRAAPASAITFVVYEESMKAL 831
L G + ++R EG LYQGL PAL+ + SWGGYFF YE K M S + +L + A A+G +MVFLTNP+WLIKTRMQLQ + S SS RPY + DA TIV+EEG ALYKGVVPAL+L G +QF++YE++K R LP+ V GE L MG ASKI AS TYP QV IKSRLQQR E +Y+G++ C I + EG GFFKG + A+R AP++AITFVVYE M L
Sbjct: 90 LKQKGKFTSTLRGVIRHEGLLGLYQGLTPALLASAASWGGYFFFYEGIKTKMIMMSLSXXXXXXXKKLSHVENFTAACASGIIMVFLTNPLWLIKTRMQLQMKRIQSSSSSTHTTTMIHNLGVMTKRPYVNLWDAGFTIVREEGVSALYKGVVPALLLVSHGGVQFVSYEYLKGRFGNKSRYSLPK--VENGGEKKKKKKIGLLQRLEDSFGYLTMGAASKIIASTTTYPLQV-IKSRLQQRSEMIELTEAGDLSVVHRQYKGLMDCMTKIWQKEGITGFFKGNIPNAIRVAPSAAITFVVYEGVMDML 395
BLAST of mRNA_P-wetherbeei_contig18630.1.1 vs. uniprot
Match: A0A485KGD8_9STRA (Aste57867_4021 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KGD8_9STRA) HSP 1 Score: 186 bits (472), Expect = 5.030e-54 Identity = 117/271 (43.17%), Postives = 152/271 (56.09%), Query Frame = 1
Query: 31 QVYDKGLSPYGSLRTAFGAIVRAEGWT--------ALYQGLGPALIGNGVSWGGYFFAYEHAKRLMRRRSTTGELGSTHHLAAGMAAGTVMVFLTNPIWLIKTRMQLQSREFFGSGSSGAAAAPRPYAGVADALRTIVKEEGALALYKGVVPALVLCGQGALQFMAYEWMKERLPRHDVNTPG--ESLAMGGASKIFASLVTYPYQVVIKSRLQQRLTAKEAARGAPRYRGMLHCAAVIARCEGPRGFFKGCVAYAVRAAPASAITFVVYE 813
QV++ P+ SL AF +IVR +G LY+G+ PAL G +SWG YF YEHAK + S H AAG+ AG + V LTNPIWL+K RMQ+Q+ A PY + +AL+ IV EEGALALYKGVVPAL+L GA +F+AYEW+K+ + +T SLAMG ++ FAS TYPYQV IK+RLQQ A +Y+G C I + EG RG++KG ++ P A+ F VYE
Sbjct: 40 QVHENSPKPFRSLAHAFASIVRTDGAAPTRRYHVRGLYEGMSPALYGTTISWGLYFLFYEHAKSFYEQHPAIP--ASVGHFAAGIQAGAMCVPLTNPIWLVKVRMQVQATH----------ATAVPYTSMTNALQRIVAEEGALALYKGVVPALLLTTHGAFKFVAYEWLKKEYQTNVGSTLSIPHSLAMGALAQAFASTATYPYQV-IKTRLQQ------GGIWADKYKGTWDCTKQIYQHEGMRGYYKGLTPNLIKVLPTGALIFAVYE 291
BLAST of mRNA_P-wetherbeei_contig18630.1.1 vs. uniprot
Match: A0A3P3YKX1_PLABS (Uncharacterized protein n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YKX1_PLABS) HSP 1 Score: 187 bits (476), Expect = 9.590e-54 Identity = 123/281 (43.77%), Postives = 161/281 (57.30%), Query Frame = 1
Query: 31 QVYDKGLSP---YGSLRTAFGAIVRAEGWTALYQGLGPALIGNGVSWGGYFFAYEHAKRL-MRRRSTTGELGSTHHLAAGMAAGTVMVFLTNPIWLIKTRMQLQSREFFGSGSSGAAAAPRPYAGVADALRTIVKEEGALALYKGVVPALVLCGQGALQFMAYEWMKERLPRH-------DVNTPGESLAMGGASKIFASLVTYPYQVVIKSRLQQRL--TAKEAARGAPR-YRGMLHCAAVIARCEGPRGFFKGCVAYAVRAAPASAITFVVYEESMKAL 831
QV GL+ Y +AF IVR EG +ALY GL P L+G+GV+WG YF Y AKRL + R LG HHL++ AG FLTNPIW++KTR+QLQ F SG++ + Y G+ DA R I +EEG LALY+G+ AL L GALQFMAYE +K H D G LAMGG +K+F+S TYP QV K+RL QR T + A +P Y+ A I + +G +GF++G + ++ P+SA+TF YEE M+ L
Sbjct: 99 QVQRSGLAAGLTYNGFLSAFPTIVRQEGVSALYIGLWPNLVGSGVAWGAYFGFYNIAKRLWVEHRGPDQPLGPLHHLSSAAVAGVATCFLTNPIWMVKTRLQLQ----FRSGNANS----HDYTGMVDAFRRITREEGFLALYRGLGAALTLVSNGALQFMAYEQLKRLALEHFVADRDEDQLNSGHFLAMGGVAKMFSSTATYPLQVT-KARLYQRQLPTNQPAGNSSPYLYKSTRDVWAHIYKHDGFKGFYRGLLPQLLKTVPSSALTFFAYEEVMRVL 370 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18630.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig18630.1.1 >prot_P-wetherbeei_contig18630.1.1 ID=prot_P-wetherbeei_contig18630.1.1|Name=mRNA_P-wetherbeei_contig18630.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=279bp YVYPAIPISNQVYDKGLSPYGSLRTAFGAIVRAEGWTALYQGLGPALIGNback to top mRNA from alignment at P-wetherbeei_contig18630:189..1204- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig18630.1.1 ID=mRNA_P-wetherbeei_contig18630.1.1|Name=mRNA_P-wetherbeei_contig18630.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1016bp|location=Sequence derived from alignment at P-wetherbeei_contig18630:189..1204- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig18630:189..1204- >mRNA_P-wetherbeei_contig18630.1.1 ID=mRNA_P-wetherbeei_contig18630.1.1|Name=mRNA_P-wetherbeei_contig18630.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=837bp|location=Sequence derived from alignment at P-wetherbeei_contig18630:189..1204- (Phaeothamnion wetherbeei SAG_119_79)back to top |