mRNA_P-wetherbeei_contig18630.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig18630.1.1
Unique NamemRNA_P-wetherbeei_contig18630.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig18630.1.1 vs. uniprot
Match: A0A835YH58_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YH58_9STRA)

HSP 1 Score: 260 bits (665), Expect = 1.850e-82
Identity = 145/268 (54.10%), Postives = 183/268 (68.28%), Query Frame = 1
Query:   31 QVYDKGLSPYGSLRTAFGAIVRAEGWTALYQGLGPALIGNGVSWGGYFFAYEHAKRLMRRRSTTGELGSTHHLAAGMAAGTVMVFLTNPIWLIKTRMQLQSREFFGSGSSGAAAAPRPYAGVADALRTIVKEEGALALYKGVVPALVLCGQGALQFMAYEWMKERLPRH-DVNTPGESLAMGGASKIFASLVTYPYQVVIKSRLQQRLTAKEAARGAPR--YRGMLHCAAVIARCEGPRGFFKGCVAYAVRAAPASAITFVVYEESMK 825
            Q Y +G SPY SL +AF  I   EGW ALY GL P++ G G++WG YF+ Y+ +K  ++  +   +L  +HHL AG     ++V L NP+WL+KTR+QLQ+R+      +      RPY G  DAL TI +EEGALALYKG+VPA++L  QGALQF AYEW+K  +PR    + P ESL MGG SKIFAS+VTYP QV IK+RLQ R  A  +A  A R  Y G   CAA+I R EG RGFF+GCV YA+RAAPASA+TFVVYEE+M+
Sbjct:   77 QAYHQGASPYASLSSAFKTIAEQEGWRALYAGLVPSVWGGGLAWGAYFYLYQMSKDALQTGTGAEQLNVSHHLTAG----NILVLLGNPVWLVKTRLQLQTRD------NTQRLGRRPYRGFTDALVTIAREEGALALYKGIVPAMLLSTQGALQFAAYEWLKGWVPRDLQQSKPVESLVMGGGSKIFASVVTYPTQV-IKTRLQDRAAAAVSAAAAGRSIYTGTAQCAALIWRQEGARGFFRGCVPYALRAAPASAVTFVVYEEAMR 333          
BLAST of mRNA_P-wetherbeei_contig18630.1.1 vs. uniprot
Match: A0A836CHG8_9STRA (Folate transporter (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHG8_9STRA)

HSP 1 Score: 238 bits (606), Expect = 5.740e-75
Identity = 125/195 (64.10%), Postives = 144/195 (73.85%), Query Frame = 1
Query:   31 QVYDKGLSPYGSLRTAFGAIVRAEGWTALYQGLGPALIGNGVSWGGYFFAYEHAKRLMRRRSTTGELGSTHHLAAGMAAGTVMVFLTNPIWLIKTRMQLQSREFFGSGSSGAAAAPRPYAGVADALRTIVKEEGALALYKGVVPALVLCGQGALQFMAYEWMKERLPRHDV-NTPGESLAMGGASKIFASLVTYP 612
            Q YDKG SPY SL  AF  IV+  GW+ LY GLGPA++G+GVSWGGYF+ YE AK  MRR S T +LG  HHL AGMAAG  +V LTNPIWL+KTRMQLQ           AAA  RPY G++DA+ TIV+EEGALALYKGVVPAL+L GQGALQF AYEW+K R+PR+   N P ESL MG +SK+FASLV  P
Sbjct:   28 QAYDKGKSPYRSLGAAFTTIVKQNGWSGLYSGLGPAVLGSGVSWGGYFYLYEWAKTSMRRFSDTEKLGPVHHLTAGMAAGNALVLLTNPIWLVKTRMQLQQXXXXXXT---AAAGRRPYTGLSDAVATIVREEGALALYKGVVPALLLSGQGALQFAAYEWLKARVPRNLAQNDPHESLLMGASSKVFASLVRTP 219          
BLAST of mRNA_P-wetherbeei_contig18630.1.1 vs. uniprot
Match: D7FQB8_ECTSI (Folate transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQB8_ECTSI)

HSP 1 Score: 236 bits (602), Expect = 4.540e-74
Identity = 119/197 (60.41%), Postives = 144/197 (73.10%), Query Frame = 1
Query:   31 QVYDKGLSPYGSLRTAFGAIVRAEGWTALYQGLGPALIGNGVSWGGYFFAYEHAKRLMRRR-STTGELGSTHHLAAGMAAGTVMVFLTNPIWLIKTRMQLQSREFFGSGSSGAAAAPRPYAGVADALRTIVKEEGALALYKGVVPALVLCGQGALQFMAYEWMKERLPRHDVNTPGESLAMGGASKIFASLVTYPYQ 618
            QVYDKG SPY SL TAF  I+R EG  ALYQGLGPAL+GN V+WGG+F+ YE  K  +R R     +LG+ HHL AG  AG +MV  TNP+W+IKTRMQLQ ++    G        RPY+G+ DA+RTI +EEG LALYKG VPAL+LCGQGA+QF  YEW+K R+P+ + NTP ESL MGGASKI ++LVTYP Q
Sbjct:   70 QVYDKGPSPYKSLGTAFRTIIREEGARALYQGLGPALLGNAVAWGGFFYCYEKIKTAIRARVPQEADLGAVHHLGAGYVAGAMMVLATNPVWMIKTRMQLQDKKAKSGGV-------RPYSGLMDAVRTITREEGPLALYKGAVPALMLCGQGAVQFAVYEWLKARVPKRNENTPQESLLMGGASKILSTLVTYPTQ 259          
BLAST of mRNA_P-wetherbeei_contig18630.1.1 vs. uniprot
Match: W7T4J3_9STRA (Mitochondrial folate transporter carrier-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T4J3_9STRA)

HSP 1 Score: 215 bits (547), Expect = 8.560e-64
Identity = 132/280 (47.14%), Postives = 172/280 (61.43%), Query Frame = 1
Query:   16 IPISNQVYDKGLSPYGSLRTAFGAIVRAEGWTALYQGLGPALIGNGVSWGGYFFAYEHAKRLMRRRSTTGELGSTHHLAAGMAAGTVMVFLTNPIWLIKTRMQLQSREFFGSGS-SGAAAAPR------------PYAGVADALRTIVKEEGALALYKGVVPALVLCGQGALQFMAYEWMKERLPRHDVNTPGESLAMGGASKIFASLVTYPYQVVIKSRLQQRLTAKEAARGAPRYRGMLHCAAVIARCEGPRGFFKGCVAYAVRAAPASAITFVVYEE 816
            I +  QVYD+   P+ S+     +IV+ EG+  LY+GL PAL+ NG+SWGGYF+ YEHAK    R+    ++ S HHL +   AG +MVFLTNP+WLIKTRMQLQ        S + A  AP              Y GV  ALRTIV+EEG L LYKG++PAL+L   GA+QF+ YEW+K+ +  +       S+ +GG +KI A LVTYP QVV K+RLQQR T   A+R   RY     C   I R EG  GFFKGC+   ++ AP++ ITF+VYE+
Sbjct:   99 IKVHLQVYDRAGRPFPSMYKGMQSIVQQEGYRGLYKGLTPALLANGLSWGGYFYFYEHAKNRYLRQHR--QITSVHHLLSAFEAGIIMVFLTNPLWLIKTRMQLQPGGASALESMTKAVTAPIVASTASHLGKQIAYTGVTQALRTIVREEGVLGLYKGILPALLLTSHGAIQFVTYEWLKKVVEPYQAPVFSFSV-LGGMAKILAGLVTYPPQVV-KARLQQRDTG--ASRW--RYTSTWDCVLKIWRFEGLLGFFKGCLPNVLKTAPSAVITFLVYEQ 370          
BLAST of mRNA_P-wetherbeei_contig18630.1.1 vs. uniprot
Match: B5YLY4_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YLY4_THAPS)

HSP 1 Score: 190 bits (482), Expect = 1.200e-55
Identity = 120/257 (46.69%), Postives = 151/257 (58.75%), Query Frame = 1
Query:   88 IVRAEGWTALYQGLGPALIGNGVSWGGYFFAYEHAKRLMRRRSTTGELGSTHHLAAGMAAGTVMVFLTNPIWLIKTRMQLQSREFFG--SGSSGAAAAPRPYAGVADALRTIVKEEGALALYKGVVPALVLCGQGALQFMAYEWMKERLPRHDVNTPGESL-------AMGGASKIFASLVTYPYQVVIKSRLQQRLTAKEAARGAPRYRGMLHCAAVIARCEGPRGFFKGCVAYAVRAAPASAITFVVYEESMKAL 831
            ++R EG+  LY+GL PA+IG+  SWGG+F  YE  K++M +R       +   L     +G  MV LTNP+WLIKTR+QLQ+       S  +G    P PY G+  A  TIVKEEG LALYKG VPAL+L   G +QF++YEW+K      +  T GE L        MG  SK  AS  TYP QV IK+RLQQR   +        Y G++ C   I R EG  GFFKGCV  A+R AP++AITFVVYE  + AL
Sbjct:   45 VIRTEGYAGLYKGLTPAIIGSAASWGGFFILYEEMKQVMLQRKIK---FANAALDTSCLSGACMVALTNPLWLIKTRLQLQNSRLQQQLSQPNGPPLKP-PYRGLVHAAFTIVKEEGVLALYKGSVPALMLVSHGGIQFVSYEWLKGHFAAWN-RTIGERLRASFGYLVMGATSKFIASTTTYPLQV-IKARLQQRSQRE--------YSGVIDCVGKIWRNEGVGGFFKGCVTNALRVAPSAAITFVVYESVLDAL 287          
BLAST of mRNA_P-wetherbeei_contig18630.1.1 vs. uniprot
Match: A0A176WGD1_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176WGD1_MARPO)

HSP 1 Score: 189 bits (480), Expect = 3.560e-55
Identity = 125/282 (44.33%), Postives = 158/282 (56.03%), Query Frame = 1
Query:   28 NQVYDKGLSPYGSLRTAFGAIVRAEGWTALYQGLGPALIGNGVSWGGYFFAYEHAKRLMRRRSTTGELGSTHHLAAGMAAGTVMVFLTNPIWLIKTRMQLQSREFFGSGSSGAAAAPRPYAGVADALRTIVKEEGALALYKGVVPALVLCGQGALQFMAYEWMKE--------RLPRHDVNTPGESLA------MGGASKIFASLVTYPYQVVIKSRLQQRLTAKEAARGAPRYRGMLHCAAVIARCEGPRGFFKGCVAYAVRAAPASAITFVVYEESMKAL 831
            N   +  +  Y S   A   I R EG   LY GL PALIG+ VSWG YF  Y +AK   +     GELG   HL + + AG+++  +TNP+WL+KTR+QLQ+    G G+       +PY GVADALR+IV+EEG   LYKG+ P L+L   GALQFMAYE M++        R+P HD +     LA      +G ASKIFA   TYPY VV +SR+QQR   K    G   Y G         R EG RG +KG     +R  P+S+ITFVVYE  +K L
Sbjct:   36 NDGRNASIPSYKSTIHALSTIGRIEGLRGLYAGLTPALIGSSVSWGAYFLFYSNAKARYQGM-VNGELGPVLHLISAVEAGSLVCLVTNPLWLVKTRLQLQAP---GHGTQ------KPYTGVADALRSIVREEGLRGLYKGLGPGLLLVSHGALQFMAYEEMQKFLLASRSKRVPDHDSDGAAPKLASVDFAVLGAASKIFALFCTYPYSVV-RSRIQQRPDDK----GVASYVGGWQALKKTFRYEGVRGLYKGLSPALIRTVPSSSITFVVYESVLKFL 302          
BLAST of mRNA_P-wetherbeei_contig18630.1.1 vs. uniprot
Match: FOLT1_ARATH (Folate transporter 1, chloroplastic n=35 Tax=Brassicaceae TaxID=3700 RepID=FOLT1_ARATH)

HSP 1 Score: 188 bits (477), Expect = 1.150e-54
Identity = 120/272 (44.12%), Postives = 155/272 (56.99%), Query Frame = 1
Query:   49 LSPYGSLRTAFGAIVRAEGWTALYQGLGPALIGNGVSWGGYFFAYEHAKRLMRRRSTTGELGSTHHLAAGMAAGTVMVFLTNPIWLIKTRMQLQSREFFGSGSSGAAAAPRPYAGVADALRTIVKEEGALALYKGVVPALVLCGQGALQFMAYEWM-------KERLPRHDVN----TPGESLAMGGASKIFASLVTYPYQVVIKSRLQQRLTAKEAARGAPRYRGMLHCAAVIARCEGPRGFFKGCVAYAVRAAPASAITFVVYEESMKAL 831
            L  Y +   A   I R EG   LY G  PA+IG+ VSWG YFF Y  AK+   R     +L    HLA+   AG ++   TNPIWL+KTR+QLQ+               +PY+G+ DA RTIVKEEG  ALYKG+VP LVL   GA+QF AYE +       KER  + +         +  A+GG+SK+ A L+TYP+QV I++RLQQR     +  G PRY   LH     AR EG RGF++G  A  ++  PAS+ITF+VYE  +K L
Sbjct:   44 LPTYKNTAHAVFTIARLEGLRGLYAGFFPAVIGSTVSWGLYFFFYGRAKQRYARGRDDEKLSPALHLASAAEAGALVCLCTNPIWLVKTRLQLQTPLH----------QTQPYSGLLDAFRTIVKEEGPRALYKGIVPGLVLVSHGAIQFTAYEELRKIIVDLKERRRKSESTDNLLNSADYAALGGSSKVAAVLLTYPFQV-IRARLQQR----PSTNGIPRYIDSLHVIRETARYEGLRGFYRGLTANLLKNVPASSITFIVYENVLKLL 300          
BLAST of mRNA_P-wetherbeei_contig18630.1.1 vs. uniprot
Match: A0A7S1ZHN0_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZHN0_9STRA)

HSP 1 Score: 189 bits (481), Expect = 2.910e-54
Identity = 131/309 (42.39%), Postives = 161/309 (52.10%), Query Frame = 1
Query:   49 LSPYGSLRTAFGAIVRAEGWTALYQGLGPALIGNGVSWGGYFFAYEHAKRLMRRRSTTG-------ELGSTHHLAAGMAAGTVMVFLTNPIWLIKTRMQLQSREFFGSGSSG---------AAAAPRPYAGVADALRTIVKEEGALALYKGVVPALVLCGQGALQFMAYEWMKER--------LPRHDVNTPGES------------------LAMGGASKIFASLVTYPYQVVIKSRLQQRLTAKEAARGAP------RYRGMLHCAAVIARCEGPRGFFKGCVAYAVRAAPASAITFVVYEESMKAL 831
            L   G   +    ++R EG   LYQGL PAL+ +  SWGGYFF YE  K  M   S +        +L    +  A  A+G +MVFLTNP+WLIKTRMQLQ +    S SS               RPY  + DA  TIV+EEG  ALYKGVVPAL+L   G +QF++YE++K R        LP+  V   GE                   L MG ASKI AS  TYP QV IKSRLQQR    E            +Y+G++ C   I + EG  GFFKG +  A+R AP++AITFVVYE  M  L
Sbjct:   90 LKQKGKFTSTLRGVIRHEGLLGLYQGLTPALLASAASWGGYFFFYEGIKTKMIMMSLSXXXXXXXKKLSHVENFTAACASGIIMVFLTNPLWLIKTRMQLQMKRIQSSSSSTHTTTMIHNLGVMTKRPYVNLWDAGFTIVREEGVSALYKGVVPALLLVSHGGVQFVSYEYLKGRFGNKSRYSLPK--VENGGEKKKKKKIGLLQRLEDSFGYLTMGAASKIIASTTTYPLQV-IKSRLQQRSEMIELTEAGDLSVVHRQYKGLMDCMTKIWQKEGITGFFKGNIPNAIRVAPSAAITFVVYEGVMDML 395          
BLAST of mRNA_P-wetherbeei_contig18630.1.1 vs. uniprot
Match: A0A485KGD8_9STRA (Aste57867_4021 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KGD8_9STRA)

HSP 1 Score: 186 bits (472), Expect = 5.030e-54
Identity = 117/271 (43.17%), Postives = 152/271 (56.09%), Query Frame = 1
Query:   31 QVYDKGLSPYGSLRTAFGAIVRAEGWT--------ALYQGLGPALIGNGVSWGGYFFAYEHAKRLMRRRSTTGELGSTHHLAAGMAAGTVMVFLTNPIWLIKTRMQLQSREFFGSGSSGAAAAPRPYAGVADALRTIVKEEGALALYKGVVPALVLCGQGALQFMAYEWMKERLPRHDVNTPG--ESLAMGGASKIFASLVTYPYQVVIKSRLQQRLTAKEAARGAPRYRGMLHCAAVIARCEGPRGFFKGCVAYAVRAAPASAITFVVYE 813
            QV++    P+ SL  AF +IVR +G           LY+G+ PAL G  +SWG YF  YEHAK    +        S  H AAG+ AG + V LTNPIWL+K RMQ+Q+            A   PY  + +AL+ IV EEGALALYKGVVPAL+L   GA +F+AYEW+K+    +  +T     SLAMG  ++ FAS  TYPYQV IK+RLQQ          A +Y+G   C   I + EG RG++KG     ++  P  A+ F VYE
Sbjct:   40 QVHENSPKPFRSLAHAFASIVRTDGAAPTRRYHVRGLYEGMSPALYGTTISWGLYFLFYEHAKSFYEQHPAIP--ASVGHFAAGIQAGAMCVPLTNPIWLVKVRMQVQATH----------ATAVPYTSMTNALQRIVAEEGALALYKGVVPALLLTTHGAFKFVAYEWLKKEYQTNVGSTLSIPHSLAMGALAQAFASTATYPYQV-IKTRLQQ------GGIWADKYKGTWDCTKQIYQHEGMRGYYKGLTPNLIKVLPTGALIFAVYE 291          
BLAST of mRNA_P-wetherbeei_contig18630.1.1 vs. uniprot
Match: A0A3P3YKX1_PLABS (Uncharacterized protein n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YKX1_PLABS)

HSP 1 Score: 187 bits (476), Expect = 9.590e-54
Identity = 123/281 (43.77%), Postives = 161/281 (57.30%), Query Frame = 1
Query:   31 QVYDKGLSP---YGSLRTAFGAIVRAEGWTALYQGLGPALIGNGVSWGGYFFAYEHAKRL-MRRRSTTGELGSTHHLAAGMAAGTVMVFLTNPIWLIKTRMQLQSREFFGSGSSGAAAAPRPYAGVADALRTIVKEEGALALYKGVVPALVLCGQGALQFMAYEWMKERLPRH-------DVNTPGESLAMGGASKIFASLVTYPYQVVIKSRLQQRL--TAKEAARGAPR-YRGMLHCAAVIARCEGPRGFFKGCVAYAVRAAPASAITFVVYEESMKAL 831
            QV   GL+    Y    +AF  IVR EG +ALY GL P L+G+GV+WG YF  Y  AKRL +  R     LG  HHL++   AG    FLTNPIW++KTR+QLQ    F SG++ +      Y G+ DA R I +EEG LALY+G+  AL L   GALQFMAYE +K     H       D    G  LAMGG +K+F+S  TYP QV  K+RL QR   T + A   +P  Y+      A I + +G +GF++G +   ++  P+SA+TF  YEE M+ L
Sbjct:   99 QVQRSGLAAGLTYNGFLSAFPTIVRQEGVSALYIGLWPNLVGSGVAWGAYFGFYNIAKRLWVEHRGPDQPLGPLHHLSSAAVAGVATCFLTNPIWMVKTRLQLQ----FRSGNANS----HDYTGMVDAFRRITREEGFLALYRGLGAALTLVSNGALQFMAYEQLKRLALEHFVADRDEDQLNSGHFLAMGGVAKMFSSTATYPLQVT-KARLYQRQLPTNQPAGNSSPYLYKSTRDVWAHIYKHDGFKGFYRGLLPQLLKTVPSSALTFFAYEEVMRVL 370          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18630.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YH58_9STRA1.850e-8254.10Mitochondrial carrier domain-containing protein n=... [more]
A0A836CHG8_9STRA5.740e-7564.10Folate transporter (Fragment) n=1 Tax=Tribonema mi... [more]
D7FQB8_ECTSI4.540e-7460.41Folate transporter n=1 Tax=Ectocarpus siliculosus ... [more]
W7T4J3_9STRA8.560e-6447.14Mitochondrial folate transporter carrier-like prot... [more]
B5YLY4_THAPS1.200e-5546.69Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A0A176WGD1_MARPO3.560e-5544.33Uncharacterized protein n=2 Tax=Marchantia polymor... [more]
FOLT1_ARATH1.150e-5444.12Folate transporter 1, chloroplastic n=35 Tax=Brass... [more]
A0A7S1ZHN0_9STRA2.910e-5442.39Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A485KGD8_9STRA5.030e-5443.17Aste57867_4021 protein n=1 Tax=Aphanomyces stellat... [more]
A0A3P3YKX1_PLABS9.590e-5443.77Uncharacterized protein n=2 Tax=Plasmodiophora bra... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig18630contigP-wetherbeei_contig18630:189..1204 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FQB8
Preferred nameSLC25A32
PFAMsMito_carr
Model size837
Max annot lvl2759|Eukaryota
KEGG rclassRC00062,RC00189,RC00676,RC01052
KEGG koko:K00276,ko:K02935,ko:K15115
KEGG TC2.A.29.10.1,2.A.29.10.2,2.A.29.10.3,2.A.29.10.5
KEGG ReactionR02382,R02529,R02613,R03139,R04027,R04300,R06154,R06740
KEGG Pathwayko00260,ko00350,ko00360,ko00410,ko00950,ko00960,ko01100,ko01110,ko03010,map00260,map00350,map00360,map00410,map00950,map00960,map01100,map01110,map03010
KEGG ModuleM00178
Hectar predicted targeting categoryother localisation
GOsGO:0001505,GO:0003674,GO:0005215,GO:0005310,GO:0005342,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006082,GO:0006520,GO:0006544,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006766,GO:0006767,GO:0006807,GO:0006810,GO:0006811,GO:0006820,GO:0006835,GO:0006839,GO:0006855,GO:0006862,GO:0008150,GO:0008152,GO:0008509,GO:0008514,GO:0008517,GO:0009069,GO:0009507,GO:0009526,GO:0009536,GO:0009941,GO:0009987,GO:0015075,GO:0015215,GO:0015230,GO:0015238,GO:0015318,GO:0015605,GO:0015711,GO:0015748,GO:0015849,GO:0015883,GO:0015884,GO:0015893,GO:0015931,GO:0015932,GO:0016020,GO:0016021,GO:0017144,GO:0019752,GO:0019866,GO:0022857,GO:0031090,GO:0031224,GO:0031300,GO:0031301,GO:0031966,GO:0031967,GO:0031975,GO:0032592,GO:0034220,GO:0034641,GO:0035350,GO:0035461,GO:0042133,GO:0042221,GO:0042493,GO:0042558,GO:0042886,GO:0042887,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043603,GO:0043648,GO:0044237,GO:0044238,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0046483,GO:0046655,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051180,GO:0051181,GO:0051182,GO:0051184,GO:0051186,GO:0051234,GO:0055085,GO:0065007,GO:0065008,GO:0071702,GO:0071704,GO:0071705,GO:0072337,GO:0072349,GO:0090482,GO:0098573,GO:0098656,GO:0098838,GO:1901360,GO:1901564,GO:1901605,GO:1901679,GO:1903825,GO:1904947,GO:1905039,GO:1990542,GO:1990548
Exons2
Evalue7.45e-75
EggNOG OGsKOG0764@1|root,KOG0764@2759|Eukaryota
Ec32 ortholog descriptionMitochondrial carrier domain
Ec32 orthologEc-01_006700.1
EC1.4.3.21
DescriptionBelongs to the mitochondrial carrier (TC 2.A.29) family
Cds size837
COG categoryU
BRITEbr01610,ko00000,ko00001,ko00002,ko01000,ko02000,ko03011
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186151.2761095-CDS-P-wetherbeei_contig18630:188..4041683186151.2761095-CDS-P-wetherbeei_contig18630:188..404Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig18630 189..404 -
1683186151.2860582-CDS-P-wetherbeei_contig18630:583..12041683186151.2860582-CDS-P-wetherbeei_contig18630:583..1204Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig18630 584..1204 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig18630.1.1prot_P-wetherbeei_contig18630.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig18630 189..1204 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig18630.1.1

>prot_P-wetherbeei_contig18630.1.1 ID=prot_P-wetherbeei_contig18630.1.1|Name=mRNA_P-wetherbeei_contig18630.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=279bp
YVYPAIPISNQVYDKGLSPYGSLRTAFGAIVRAEGWTALYQGLGPALIGN
GVSWGGYFFAYEHAKRLMRRRSTTGELGSTHHLAAGMAAGTVMVFLTNPI
WLIKTRMQLQSREFFGSGSSGAAAAPRPYAGVADALRTIVKEEGALALYK
GVVPALVLCGQGALQFMAYEWMKERLPRHDVNTPGESLAMGGASKIFASL
VTYPYQVVIKSRLQQRLTAKEAARGAPRYRGMLHCAAVIARCEGPRGFFK
GCVAYAVRAAPASAITFVVYEESMKALAT
back to top

mRNA from alignment at P-wetherbeei_contig18630:189..1204-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig18630.1.1 ID=mRNA_P-wetherbeei_contig18630.1.1|Name=mRNA_P-wetherbeei_contig18630.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1016bp|location=Sequence derived from alignment at P-wetherbeei_contig18630:189..1204- (Phaeothamnion wetherbeei SAG_119_79)
TATGTTTATCCCGCCATCCCCATCTCGAACCAGGTGTACGACAAGGGGTT GTCGCCGTACGGCTCTCTGCGCACGGCGTTCGGTGCGATCGTGCGCGCCG AGGGCTGGACAGCCCTGTACCAGGGCCTGGGACCTGCTCTTATCGGCAAC GGCGTCTCGTGGGGCGGTTATTTCTTCGCTTACGAGCACGCCAAGCGCCT GATGCGGCGGCGCAGCACCACGGGCGAGCTGGGCTCGACCCATCACCTCG CTGCCGGCATGGCCGCCGGCACAGTCATGGTCTTCCTGACCAACCCCATC TGGCTCATCAAGACGCGGATGCAGCTGCAGTCCCGCGAATTCTTCGGGAG CGGCAGCAGCGGGGCGGCCGCCGCGCCCCGCCCTTACGCCGGCGTCGCCG ATGCGCTGAGAACCATCGTCAAAGAGGAGGGCGCCCTGGCGCTGTACAAG GGGGTGGTGCCGGCGCTGGTGCTCTGCGGGCAGGGGGCGCTGCAGTTTAT GGCGTACGAGTGGATGAAGGAGCGGCTGCCGCGGCACGACGTCAACACGC CCGGCGAATCGCTGGCGATGGGCGGCGCCTCGAAGATCTTTGCCAGCCTC GTCACGTACCCCTACCAGGTCGTTTGATTGGTTGGTTGGATTTTACTACG GCTCGGCTTGCTTGCAGGTGACGCTTGCGACAAGAGTGCTTTTCGTCGTT TGCTTGAATTACTCGCATGCTTTGATTGCCTCCCACCGGCAGAGTGAGAC ACCAGCTCAGCTCTTTCTTCTTTTGACACCAATCTTTTCCCTCCTGGCAG GTAATAAAGTCGCGGCTCCAGCAGCGGCTGACGGCGAAAGAGGCCGCGCG CGGGGCGCCGCGCTACCGCGGCATGCTGCACTGCGCCGCTGTCATCGCTC GGTGTGAAGGTCCGCGTGGCTTCTTCAAGGGCTGCGTCGCCTACGCGGTA CGGGCGGCGCCGGCCTCCGCCATCACCTTCGTGGTGTACGAGGAGAGCAT GAAAGCGCTGGCGACG
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig18630:189..1204-

>mRNA_P-wetherbeei_contig18630.1.1 ID=mRNA_P-wetherbeei_contig18630.1.1|Name=mRNA_P-wetherbeei_contig18630.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=837bp|location=Sequence derived from alignment at P-wetherbeei_contig18630:189..1204- (Phaeothamnion wetherbeei SAG_119_79)
TATGTTTATCCCGCCATCCCCATCTCGAACCAGGTGTACGACAAGGGGTT
GTCGCCGTACGGCTCTCTGCGCACGGCGTTCGGTGCGATCGTGCGCGCCG
AGGGCTGGACAGCCCTGTACCAGGGCCTGGGACCTGCTCTTATCGGCAAC
GGCGTCTCGTGGGGCGGTTATTTCTTCGCTTACGAGCACGCCAAGCGCCT
GATGCGGCGGCGCAGCACCACGGGCGAGCTGGGCTCGACCCATCACCTCG
CTGCCGGCATGGCCGCCGGCACAGTCATGGTCTTCCTGACCAACCCCATC
TGGCTCATCAAGACGCGGATGCAGCTGCAGTCCCGCGAATTCTTCGGGAG
CGGCAGCAGCGGGGCGGCCGCCGCGCCCCGCCCTTACGCCGGCGTCGCCG
ATGCGCTGAGAACCATCGTCAAAGAGGAGGGCGCCCTGGCGCTGTACAAG
GGGGTGGTGCCGGCGCTGGTGCTCTGCGGGCAGGGGGCGCTGCAGTTTAT
GGCGTACGAGTGGATGAAGGAGCGGCTGCCGCGGCACGACGTCAACACGC
CCGGCGAATCGCTGGCGATGGGCGGCGCCTCGAAGATCTTTGCCAGCCTC
GTCACGTACCCCTACCAGGTCGTAATAAAGTCGCGGCTCCAGCAGCGGCT
GACGGCGAAAGAGGCCGCGCGCGGGGCGCCGCGCTACCGCGGCATGCTGC
ACTGCGCCGCTGTCATCGCTCGGTGTGAAGGTCCGCGTGGCTTCTTCAAG
GGCTGCGTCGCCTACGCGGTACGGGCGGCGCCGGCCTCCGCCATCACCTT
CGTGGTGTACGAGGAGAGCATGAAAGCGCTGGCGACG
back to top