prot_P-wetherbeei_contig18493.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig18493.1.1
Unique Nameprot_P-wetherbeei_contig18493.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length53
Homology
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BLAST of mRNA_P-wetherbeei_contig18493.1.1 vs. uniprot
Match: A0A8M2BKU9_DANRE (vacuolar protein sorting-associated protein 13B n=1 Tax=Danio rerio TaxID=7955 RepID=A0A8M2BKU9_DANRE)

HSP 1 Score: 45.8 bits (107), Expect = 8.130e-5
Identity = 20/46 (43.48%), Postives = 27/46 (58.70%), Query Frame = 0 
Query:    1 LDASLWWGDLVISGITLRDDILRRYLDLPFELREASIASIALRVPW 46
            L  SLW GD+V+S + LR D+L + L LPF      I  + + VPW
Sbjct:   26 LQLSLWGGDVVLSKLDLRLDVLEQELKLPFTFLSGHIHELRIHVPW 71
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18493.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A8M2BKU9_DANRE8.130e-543.48vacuolar protein sorting-associated protein 13B n=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026854Vacuolar protein sorting-associated protein 13-like, N-terminal domainPFAMPF12624Chorein_Ncoord: 1..48
e-value: 8.9E-9
score: 35.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig18493contigP-wetherbeei_contig18493:358..516 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig18493.1.1mRNA_P-wetherbeei_contig18493.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig18493 358..516 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig18493.1.1 ID=prot_P-wetherbeei_contig18493.1.1|Name=mRNA_P-wetherbeei_contig18493.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=53bp
LDASLWWGDLVISGITLRDDILRRYLDLPFELREASIASIALRVPWLTVW
LR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026854VPS13-like_N