mRNA_P-wetherbeei_contig1820.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1820.1.1 vs. uniprot
Match: A0A2J6PLN7_9HELO (SAC3_GANP domain-containing protein n=1 Tax=Hyaloscypha hepaticicola TaxID=2082293 RepID=A0A2J6PLN7_9HELO) HSP 1 Score: 65.1 bits (157), Expect = 3.880e-9 Identity = 48/162 (29.63%), Postives = 73/162 (45.06%), Query Frame = 1
Query: 1 GVCEEMCNPKQMAERPLPSHNGVSWHETIPGDRDNEEKPPMDPKGMVKLFRRNAAGREAETPADLRTAGALERSVAYLMKTMDATTRFENGEAILYKSAHDFVWIRLRSVLSDVSTQQFSAPEDLAPAIRAIEMSVAWHLSEYHRSFRFPAIKNRKFVAEQE 486
G CE+MC + A R + G D E+ PK MVK R+AAG++A P D+RT GA+ R+V +L + N E S H FVW R R++ D + +LA + +E +H++ H+ + + KF +QE
Sbjct: 359 GTCEDMCPEFERASR------------IMDGRIDKNEE--GGPKNMVKALARSAAGQDAPLPNDIRTTGAMRRTVDHLFHNI-----LGNSEL---GSVHGFVWDRTRAIRRDFVFHSSMSSAELADQVYCLEHITRFHVTALHQMSKLN-LSADKFSEQQE 497
BLAST of mRNA_P-wetherbeei_contig1820.1.1 vs. uniprot
Match: F0XRB1_GROCL (Leucine permease transcriptional regulator n=1 Tax=Grosmannia clavigera (strain kw1407 / UAMH 11150) TaxID=655863 RepID=F0XRB1_GROCL) HSP 1 Score: 61.2 bits (147), Expect = 8.530e-8 Identity = 43/160 (26.88%), Postives = 73/160 (45.62%), Query Frame = 1
Query: 1 GVCEEMCNPKQMAERPLPSHNGVSWHETIPGDRDNEEKPPMDPKGMVKLFRRNAAGREAETPADLRTAGALERSVAYLMKTMDATTRFENGEAILYKSAHDFVWIRLRSVLSDVSTQQFSAPEDLAPAIRAIEMSVAWHLSEYHRSFRFPAIKNRKFVAE 480
G+CEEMC + R + ++ +T D P + MVK R+AAG+EA P D+R+ GAL+R++ YL+ T+ G+ + H+F+W R R++ D ++ + +E +H + H+ + R F AE
Sbjct: 904 GICEEMCPEFEKMSR-MVQYDVKMAEKTEGPDGTMWAAPEL----MVKALARSAAGQEAPLPMDVRSVGALKRTLDYLVDTV-------LGDDSRLATTHNFLWDRTRAIRRDFVFHSSMTASEMGEQVYCLETITRFHATALHQ------LSRRGFAAE 1045
BLAST of mRNA_P-wetherbeei_contig1820.1.1 vs. uniprot
Match: A0A507DTM9_9FUNG (Uncharacterized protein n=2 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507DTM9_9FUNG) HSP 1 Score: 57.8 bits (138), Expect = 1.320e-6 Identity = 40/123 (32.52%), Postives = 61/123 (49.59%), Query Frame = 1
Query: 1 GVCEEMCNPKQMAERPLPSHNGVSWHETIPGDRDNEEKPPMDPKGMVKLFRRNAAGREAETPADLRTAGALERSVAYLMKTMDATTRFENGEAILYKSAHDFVWIRLRSVLSDVSTQQFSAPE 369
G CE+ C + ER S + + E +PG + MVK F+R+AAG P D+RT GAL RS+ +L+ ++ A +NG + Y F W R R++ +D + Q + PE
Sbjct: 310 GECEDFCPEYERWERESQSGD-IFRFERVPGTEITDHS------RMVKRFKRSAAGDAQVLPCDVRTPGALVRSLDFLIHSVIA----DNGLVLPYY----FCWDRTRAIRNDFTLQNYCGPE 417
BLAST of mRNA_P-wetherbeei_contig1820.1.1 vs. uniprot
Match: A0A835L7M0_SPOEX (PCI domain-containing protein n=5 Tax=Spodoptera TaxID=7106 RepID=A0A835L7M0_SPOEX) HSP 1 Score: 57.8 bits (138), Expect = 1.320e-6 Identity = 48/167 (28.74%), Postives = 80/167 (47.90%), Query Frame = 1
Query: 1 GVCEEMCNPKQMAERPLPSHNGVSWHETIPGDRDNEEKPPMDPKGMVKLFRRNAAGREAETPADLRTAGALERSVAYLMKTMDATTRFENGEAILYKSAHDFVWIRLRSVLSDVSTQQFSAPEDLAPAIRAIEMSVAWHLSEYHRSFRFPAIKNRKFVAEQEQANMT 501
G C++MC K++ +R S + V ET+ D D E ++P VK + R++A +E +LR AG L R+ AYL+ + T R + L H F+W RLR + D++ Q E + +EM +H H + R +++ +F + N+T
Sbjct: 221 GTCQDMCPEKELLQRQ--SEHQVMTLETVL-DSDGE----LEPWRAVKQYSRSSADQEIPMCYELRPAGVLMRTCAYLLHEIADTKR----QVSLADWFH-FMWDRLRGIRKDITQQALCCAESIC----LVEMCARFHA---HCAARLADLEHTQFDQKLNTDNLT 368
BLAST of mRNA_P-wetherbeei_contig1820.1.1 vs. uniprot
Match: A0A136J7X0_9PEZI (SAC3/GANP/Nin1/mts3/eIF-3 p25 family-domain-containing protein n=1 Tax=Microdochium bolleyi TaxID=196109 RepID=A0A136J7X0_9PEZI) HSP 1 Score: 57.0 bits (136), Expect = 2.390e-6 Identity = 42/167 (25.15%), Postives = 78/167 (46.71%), Query Frame = 1
Query: 1 GVCEEMCNPKQMAERPLPSHNGVSWHETIPGDRDNEEKPPMDPKGMVKLFRRNAAGREAETPADLRTAGALERSVAYLMKTMDATTRFENGEAILYKSAHDFVWIRLRSVLSDVSTQQFSAPED-LAPAIRAIEMSVAWHLSEYHRSFRFPAIKNRKFVAEQEQANM 498
G+CE+MC + R + E I G+ N+ + MV R++AG++A P D+R+ GAL+R++ Y++ + F + H+F+W R R++ D Q+++ D + I +E +H++ H + P + F A+QE +
Sbjct: 169 GICEDMCPAWERITRIVQHDVKREEREDINGE--NQANIEL----MVTRHARSSAGQDAPLPMDVRSPGALKRTLKYMIDELIPEDHF-------LPARHNFLWDRTRAIRKDFIYQEYAMGHDEMQDYIYCLETIARFHVTALHLLTQ-PDFAGKDFSAQQENEQL 321 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1820.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1820.1.1 >prot_P-wetherbeei_contig1820.1.1 ID=prot_P-wetherbeei_contig1820.1.1|Name=mRNA_P-wetherbeei_contig1820.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=165bp MCNPKQMAERPLPSHNGVSWHETIPGDRDNEEKPPMDPKGMVKLFRRNAAback to top mRNA from alignment at P-wetherbeei_contig1820:1245..1826+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1820.1.1 ID=mRNA_P-wetherbeei_contig1820.1.1|Name=mRNA_P-wetherbeei_contig1820.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=582bp|location=Sequence derived from alignment at P-wetherbeei_contig1820:1245..1826+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1820:1245..1826+ >mRNA_P-wetherbeei_contig1820.1.1 ID=mRNA_P-wetherbeei_contig1820.1.1|Name=mRNA_P-wetherbeei_contig1820.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=495bp|location=Sequence derived from alignment at P-wetherbeei_contig1820:1245..1826+ (Phaeothamnion wetherbeei SAG_119_79)back to top |