mRNA_P-wetherbeei_contig17449.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig17449.1.1 vs. uniprot
Match: A0A835YTG3_9STRA (Putative NIN-like transcription factor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTG3_9STRA) HSP 1 Score: 159 bits (402), Expect = 2.360e-43 Identity = 85/111 (76.58%), Postives = 96/111 (86.49%), Query Frame = 1
Query: 4 ITLELLQEYYHVPLVEVAKELGMSLTMLKKICRKFGIQRWPHRQIRSLNKTMQELQEKTAAAATAEEAAELQRQMSLLEKKRMLVMRGASSGLQSALRNALFLTNPQDLFE 336
ITLELLQ YY+VPL E+AKELG+SLT+LKKICRKFGIQRWPHRQIRSLNKT QEL+E+ A TAEE AE++ Q+ LLEKK+ LV RGASSGLQSALRNALFL NP+ L E
Sbjct: 11 ITLELLQSYYNVPLAELAKELGLSLTLLKKICRKFGIQRWPHRQIRSLNKTAQELKERAQCALTAEEHAEIEAQLQLLEKKKRLVTRGASSGLQSALRNALFLANPEQLEE 121
BLAST of mRNA_P-wetherbeei_contig17449.1.1 vs. uniprot
Match: A0A835Z1M5_9STRA (Putative NIN-like transcription factor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1M5_9STRA) HSP 1 Score: 151 bits (381), Expect = 3.860e-40 Identity = 81/111 (72.97%), Postives = 94/111 (84.68%), Query Frame = 1
Query: 4 ITLELLQEYYHVPLVEVAKELGMSLTMLKKICRKFGIQRWPHRQIRSLNKTMQELQEKTAAAATAEEAAELQRQMSLLEKKRMLVMRGASSGLQSALRNALFLTNPQDLFE 336
ITLELLQ +Y+VPL E+AKELG+SLT+LKKICRK+GIQRWPHRQIRS+NK+ QEL E+ A + EE AELQ Q+ LLEKK+ LV RGASSGLQSALRNALFL NP+ L E
Sbjct: 14 ITLELLQSFYNVPLAELAKELGLSLTLLKKICRKYGIQRWPHRQIRSINKSAQELTERINGATSHEERAELQSQLHLLEKKKRLVTRGASSGLQSALRNALFLANPEQLEE 124
BLAST of mRNA_P-wetherbeei_contig17449.1.1 vs. uniprot
Match: H6WBB7_VAULI (Putative NIN-like transcription factor n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WBB7_VAULI) HSP 1 Score: 144 bits (363), Expect = 1.100e-37 Identity = 75/111 (67.57%), Postives = 93/111 (83.78%), Query Frame = 1
Query: 4 ITLELLQEYYHVPLVEVAKELGMSLTMLKKICRKFGIQRWPHRQIRSLNKTMQELQEKTAAAATAEEAAELQRQMSLLEKKRMLVMRGASSGLQSALRNALFLTNPQDLFE 336
ITLELLQ YY+VPL E+AKELG+SLT+LKKICRKFGIQRWPHRQIRS+NK +Q+L E+ + + +E AEL+ Q+ LLEKKR LV +GASSGL +A+RNA+FL NP+ L E
Sbjct: 14 ITLELLQSYYNVPLAELAKELGLSLTLLKKICRKFGIQRWPHRQIRSINKNIQDLNERINSVNSPDEHAELRNQIGLLEKKRRLVTKGASSGLHTAMRNAIFLANPEHLQE 124
BLAST of mRNA_P-wetherbeei_contig17449.1.1 vs. uniprot
Match: A0A835YN08_9STRA (RWP-RK domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN08_9STRA) HSP 1 Score: 129 bits (323), Expect = 1.590e-34 Identity = 68/105 (64.76%), Postives = 87/105 (82.86%), Query Frame = 1
Query: 7 TLELLQEYYHVPLVEVAKELGMSLTMLKKICRKFGIQRWPHRQIRSLNKTMQELQEKTAAAATAEEAAELQRQMSLLEKKRMLVMRGASSGLQSALRNALFLTNP 321
TLELLQ ++ PLV+VA+E +SLTM+K++CRK GIQRWPHRQIRSL+K + EL+E+ +A +A E + LQ Q++LLEKKR LV RGASSGLQSALRNALF+ +P
Sbjct: 4 TLELLQSRFNTPLVDVAREFRVSLTMMKRLCRKLGIQRWPHRQIRSLDKLLFELEERISATTSARELSYLQEQVALLEKKRRLVTRGASSGLQSALRNALFMADP 108
BLAST of mRNA_P-wetherbeei_contig17449.1.1 vs. uniprot
Match: A0A835Z7T4_9STRA (RWP-RK domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7T4_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 1.460e-21 Identity = 50/101 (49.50%), Postives = 73/101 (72.28%), Query Frame = 1
Query: 19 LQEYYHVPLVEVAKELGMSLTMLKKICRKFGIQRWPHRQIRSLNKTMQELQEKTAAAATAEEAAELQRQMSLLEKKRMLVMRGASSGLQSALRNALFLTNP 321
L+E+YHVPL A+EL +SLTMLKK+CR++GI+RWPHRQ+ SLNK++ +L+EK A+ + AA L+ + L KR L+++ AS+GL + NA+F P
Sbjct: 18 LEEFYHVPLNIAARELSVSLTMLKKLCRQYGIKRWPHRQVSSLNKSLGKLEEKILGASDDKAAAALRAKAGPLRTKRELIIKTASAGLDPDVLNAVFAARP 118
BLAST of mRNA_P-wetherbeei_contig17449.1.1 vs. uniprot
Match: A0A6H5JS66_9PHAE (RWP-RK domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS66_9PHAE) HSP 1 Score: 99.4 bits (246), Expect = 4.780e-20 Identity = 51/111 (45.95%), Postives = 79/111 (71.17%), Query Frame = 1
Query: 4 ITLELLQEYYHVPLVEVAKELGMSLTMLKKICRKFGIQRWPHRQIRSLNKTMQELQEKTAAAATAEEAAELQRQMSLLEKKRMLVMRGASSGLQSALRNALFLTNPQDLFE 336
IT+E+LQ+++H PLV VA ELG+SLTM+K++CRK G+ RWP RQI S+NK M++L ++ A T + A + + EKK+ L+ RGA++G+ +RNAL+L + ++ E
Sbjct: 31 ITIEVLQQHFHQPLVVVADELGVSLTMIKRLCRKLGMPRWPFRQIDSINKAMEDLHDQLEGARTEADRARYCKALEDAEKKKQLITRGAAAGVDPNVRNALYLADTANVSE 141
BLAST of mRNA_P-wetherbeei_contig17449.1.1 vs. uniprot
Match: A0A836CMG7_9STRA (RWP-RK domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMG7_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 5.580e-20 Identity = 52/109 (47.71%), Postives = 78/109 (71.56%), Query Frame = 1
Query: 4 ITLELLQEYYHVPLVEVAKELGMSLTMLKKICRKFGIQRWPHRQIRSLNKTMQELQEKTAAAATAEEAAELQRQMSLLEKKRMLVMRGASSGLQSALRNALFLTNPQDL 330
ITL +L+ Y PL A+ LG+S TMLKK+CR++GIQRWPHRQIRS+ K +Q+ + A A +A + A +++LL+KKR +V++ AS GL ++LR+A+F+ P +L
Sbjct: 100 ITLSVLEACYGEPLTAAARRLGVSNTMLKKLCRRYGIQRWPHRQIRSIEKEVQKHMQARAQATSAVDIAACDERIALLQKKRAIVVKTASCGLNASLRSAIFMARPGEL 208
BLAST of mRNA_P-wetherbeei_contig17449.1.1 vs. uniprot
Match: D8LTZ5_ECTSI (Putative NIN-like transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTZ5_ECTSI) HSP 1 Score: 98.6 bits (244), Expect = 8.540e-20 Identity = 50/111 (45.05%), Postives = 79/111 (71.17%), Query Frame = 1
Query: 4 ITLELLQEYYHVPLVEVAKELGMSLTMLKKICRKFGIQRWPHRQIRSLNKTMQELQEKTAAAATAEEAAELQRQMSLLEKKRMLVMRGASSGLQSALRNALFLTNPQDLFE 336
IT+E+LQ+++H PL+ VA ELG+SLTM+K++CRK G+ RWP RQI S+NK M++L ++ A T + A + + EKK+ L+ RGA++G+ +RNAL+L + ++ E
Sbjct: 31 ITIEVLQQHFHQPLMAVADELGVSLTMIKRLCRKLGMPRWPFRQIDSINKAMEDLHDQLEGARTEADRARYCKALEDAEKKKQLITRGAAAGVDPNVRNALYLADTANVSE 141
BLAST of mRNA_P-wetherbeei_contig17449.1.1 vs. uniprot
Match: A0A7S3UTA5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UTA5_HETAK) HSP 1 Score: 96.3 bits (238), Expect = 2.690e-19 Identity = 52/106 (49.06%), Postives = 75/106 (70.75%), Query Frame = 1
Query: 4 ITLELLQEYYHVPLVEVAKELGMSLTMLKKICRKFGIQRWPHRQIRSLNKTMQELQ-EKTAAAATAEEAAELQRQMSLLEKKRMLVMRGASSGLQSALRNALFLTN 318
I ++LL+ + +PL E A LG+S+T LKKICRKF I+RWPHRQ+RSL ++EL+ +K T + A+L R++ LLEKKR++V++ AS GL+ RNA+F N
Sbjct: 29 INIDLLENKFDLPLSEAASSLGLSMTKLKKICRKFNIKRWPHRQVRSLENEIEELEMKKRRPNVTCAKIAKLNRRIELLEKKRLIVVKAASFGLEPKERNAIFCAN 134
BLAST of mRNA_P-wetherbeei_contig17449.1.1 vs. uniprot
Match: A0A7S3YET5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YET5_HETAK) HSP 1 Score: 91.7 bits (226), Expect = 8.290e-18 Identity = 52/130 (40.00%), Postives = 88/130 (67.69%), Query Frame = 1
Query: 4 ITLELLQEYYHVPLVEVAKELGMSLTMLKKICRKFGIQRWPHRQIRSLNKTMQELQEK-TAAAATAEEAAELQRQMSLLEKKRMLVMRGASSGLQSALRNALFLTNPQDLFE-----GGDGDGAISDAAL 375
I L +L+ Y +PL EVA ++G+SLTM+K+ICR + I+RWPHRQ++S+ KT+ +L+++ + +A E+ RQ+ L E+K+ L+ + AS GL + R+ LFL++P +L + G+ +G +SD +L
Sbjct: 253 IPLHILESKYELPLKEVADQIGVSLTMMKQICRHYKIKRWPHRQMKSIMKTLHQLKDRLNMVDPNSSDAQEIMRQVQLTEQKKSLITKMASRGLNAEERSLLFLSHPGELNKLLVPGEGEDEGELSDGSL 382 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17449.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig17449.1.1 >prot_P-wetherbeei_contig17449.1.1 ID=prot_P-wetherbeei_contig17449.1.1|Name=mRNA_P-wetherbeei_contig17449.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=248bp MITLELLQEYYHVPLVEVAKELGMSLTMLKKICRKFGIQRWPHRQIRSLNback to top mRNA from alignment at P-wetherbeei_contig17449:364..1107- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig17449.1.1 ID=mRNA_P-wetherbeei_contig17449.1.1|Name=mRNA_P-wetherbeei_contig17449.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=744bp|location=Sequence derived from alignment at P-wetherbeei_contig17449:364..1107- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig17449:364..1107- >mRNA_P-wetherbeei_contig17449.1.1 ID=mRNA_P-wetherbeei_contig17449.1.1|Name=mRNA_P-wetherbeei_contig17449.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=744bp|location=Sequence derived from alignment at P-wetherbeei_contig17449:364..1107- (Phaeothamnion wetherbeei SAG_119_79)back to top |