mRNA_P-wetherbeei_contig17238.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig17238.1.1 vs. uniprot
Match: A0A2I0V8C2_9ASPA (Uncharacterized protein n=2 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0V8C2_9ASPA) HSP 1 Score: 152 bits (383), Expect = 2.700e-41 Identity = 77/180 (42.78%), Postives = 107/180 (59.44%), Query Frame = 1
Query: 427 MFEWHGSRYLGAAHGLAGIALAMMQGVRAIHGASSXXXXXXXXXXXXXXXXILLPSPEREALEHARGTLRFLVSLQLPSGNFPSRPEAERDRLVQWCHGAPGVVLALAEGYGLFGDERFAAAAARGSDGIWRRGLLVKGNGLCHGVAGNAYAFLSLWRVTGDAKHLYRPHRFAEFAVSKA 966
M+EWHG +Y GAAHGLAGI +M + E +E+ +GTL +++ + PSGN+PS +E DRLV WCHGAPG+ L L + +FGDERF AA ++ +W RGLL + G+CHG++GNAY FLSL+R+TG+A++LYR FA F + +A
Sbjct: 1 MYEWHGKKYWGAAHGLAGIMHVLMD-----------------------------MELKAEEIEYVKGTLLYMIKNRFPSGNYPSSENSETDRLVHWCHGAPGITLTLVKAAQVFGDERFFQAAVDAAEVVWNRGLLRR-VGICHGISGNAYVFLSLFRLTGNAEYLYRAKAFACFLLDRA 150
BLAST of mRNA_P-wetherbeei_contig17238.1.1 vs. uniprot
Match: A0A7J8YMU8_GOSAI (Uncharacterized protein n=1 Tax=Gossypium aridum TaxID=34290 RepID=A0A7J8YMU8_GOSAI) HSP 1 Score: 151 bits (382), Expect = 3.800e-41 Identity = 76/180 (42.22%), Postives = 106/180 (58.89%), Query Frame = 1
Query: 427 MFEWHGSRYLGAAHGLAGIALAMMQGVRAIHGASSXXXXXXXXXXXXXXXXILLPSPEREALEHARGTLRFLVSLQLPSGNFPSRPEAERDRLVQWCHGAPGVVLALAEGYGLFGDERFAAAAARGSDGIWRRGLLVKGNGLCHGVAGNAYAFLSLWRVTGDAKHLYRPHRFAEFAVSKA 966
M+EWHG +Y GAAHGLAGI +M + + +E+ +GTLR+++ + PSGN+PS +E DRLV WCHGAPG+ L L + +FGD+ F AA G + +W+RGLL K G+CHG++GNAY FLSL+R+TG+ ++LYR FA F +A
Sbjct: 1 MYEWHGKKYWGAAHGLAGIIHVLMD-----------------------------TELKPDEVEYVKGTLRYIIKNRFPSGNYPSSEGSESDRLVHWCHGAPGITLTLVKAAEVFGDKEFLQAALDGGEVVWKRGLL-KRVGICHGISGNAYVFLSLYRLTGNVEYLYRAKAFASFLSDRA 150
BLAST of mRNA_P-wetherbeei_contig17238.1.1 vs. uniprot
Match: A0A452YKH3_AEGTS (Uncharacterized protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A452YKH3_AEGTS) HSP 1 Score: 151 bits (382), Expect = 8.080e-41 Identity = 78/183 (42.62%), Postives = 108/183 (59.02%), Query Frame = 1
Query: 424 LMFEWHGSRYLGAAHGLAGIALAMMQGVRAIHGASSXXXXXXXXXXXXXXXXILLPSPEREALEHARGTLRFLVSLQLPSGNFPSRPEAERDRLVQWCHGAPGVVLALAEGYGLFGDERFAAAAARGSDGIWRRGLLVKGNGLCHGVAGNAYAFLSLWRVTGDAKHLYRPHRFAEFAVSKAAR 972
LM+EWHG +Y GAAHGLAGI +M + + + + TLR+++S + PSGN+PS ++E DRLV WCHGAPGV L LA+ Y +F D+ F +AA ++ +W RGLL K G+CHG++GNAY FLSL+R+TG+ ++LYR FA F + A R
Sbjct: 26 LMYEWHGKKYWGAAHGLAGIMHVLMH-----------------------------TELKLDEQDDVKNTLRYMISNRFPSGNYPSSEDSESDRLVHWCHGAPGVALTLAKAYQVFQDDHFKQSAAEAAEVVWNRGLL-KRVGICHGISGNAYVFLSLYRLTGNVEYLYRAKAFACFLLENADR 178
BLAST of mRNA_P-wetherbeei_contig17238.1.1 vs. uniprot
Match: A0A8J5WKA5_ZIZPA (Uncharacterized protein n=1 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5WKA5_ZIZPA) HSP 1 Score: 155 bits (392), Expect = 8.670e-41 Identity = 103/287 (35.89%), Postives = 140/287 (48.78%), Query Frame = 1
Query: 106 LLKLQDTAVSDRVPFEQLYGTAGYLSALLFVRSLPGILGAAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVPDSAIRACLGRLVAEGARGAAEAGLQPPALMFEWHGSRYLGAAHGLAGIALAMMQGVRAIHGASSXXXXXXXXXXXXXXXXILLPSPEREALEHARGTLRFLVSLQLPSGNFPSRPEAERDRLVQWCHGAPGVVLALAEGYGLFGDERFAAAAARGSDGIWRRGLLVKGNGLCHGVAGNAYAFLSLWRVTGDAKHLYRPHRFAEFAVSKA 966
L + V+++VP E LYG AGYL A LF+ +P I + ++ EG R + G P LM+EWHG +Y GAAHGLAGI +M L P + + + TLR++++ + PSGN+PS +E DRLV WCHGAPGV L LA+ Y +F DE F +AA ++ +W RGLL K G+CHGV+GNAY FLSL+R+TG+ ++LYR FA F + KA
Sbjct: 95 LSSFDEIIVTEKVPNELLYGRAGYLWACLFLNK-------------------------------------HIREKTIPLEHIGSVAKDIIKEG-RKLSNKGSSP--LMYEWHGKKYWGAAHGLAGIMHVLMH-------------------------TELKPDEQ----DDVKNTLRYMITNRYPSGNYPSSEGSESDRLVHWCHGAPGVALTLAKAYEVFHDEHFKQSAAEAAEVVWNRGLL-KRVGICHGVSGNAYVFLSLYRLTGNVEYLYRAKAFACFLLEKA 311
BLAST of mRNA_P-wetherbeei_contig17238.1.1 vs. uniprot
Match: B6TCV9_MAIZE (LanC-like protein 2 n=1 Tax=Zea mays TaxID=4577 RepID=B6TCV9_MAIZE) HSP 1 Score: 156 bits (394), Expect = 1.170e-40 Identity = 103/287 (35.89%), Postives = 139/287 (48.43%), Query Frame = 1
Query: 106 LLKLQDTAVSDRVPFEQLYGTAGYLSALLFVRSLPGILGAAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVPDSAIRACLGRLVAEGARGAAEAGLQPPALMFEWHGSRYLGAAHGLAGIALAMMQGVRAIHGASSXXXXXXXXXXXXXXXXILLPSPEREALEHARGTLRFLVSLQLPSGNFPSRPEAERDRLVQWCHGAPGVVLALAEGYGLFGDERFAAAAARGSDGIWRRGLLVKGNGLCHGVAGNAYAFLSLWRVTGDAKHLYRPHRFAEFAVSKA 966
L + ++++VP E LYG AGYL A LF+ +P I + ++ EG RG A G P LM+EWHG +Y GAAHGLAGI +M L P + + + TLR+++ + PSGN+PS E D LV WCHGAPGV L LA+ Y +F D+ F +AA ++ +W RGLL K G+CHGV+GNAYAFLSL+R+TG+ ++LYR FA F + KA
Sbjct: 140 LSSFDEITITEKVPNELLYGRAGYLWACLFLNK-------------------------------------HLSEKTIPLDHINSVAKDIINEG-RGFASKGSSP--LMYEWHGKKYWGAAHGLAGIMHVLMH-------------------------TELKPDEQ----DDVKNTLRYMIKNKFPSGNYPSSEGNESDHLVHWCHGAPGVALTLAKAYEVFHDDYFEQSAAEAAEVVWNRGLL-KRVGICHGVSGNAYAFLSLYRLTGNVEYLYRAKAFACFLLEKA 356
BLAST of mRNA_P-wetherbeei_contig17238.1.1 vs. uniprot
Match: A0A2U1PNE2_ARTAN (G protein coupled receptor n=2 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1PNE2_ARTAN) HSP 1 Score: 155 bits (393), Expect = 2.380e-40 Identity = 107/316 (33.86%), Postives = 150/316 (47.47%), Query Frame = 1
Query: 4 RITLIEGEGGLHALGAALSASAGNSTSAARHVMSLLKLQDTAVSDRVPFEQLYGTAGYLSALLFVRSLPGILGAAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVPDSAIRACLGRLVAEGARGAAEAGLQPPALMFEWHGSRYLGAAHGLAGIALAMMQGVRAIHGASSXXXXXXXXXXXXXXXXILLPSPEREALEHARGTLRFLVSLQLPSGNFPSRPEAERDRLVQWCHGAPGVVLALAEGYGLFGDERFAAAAARGSDGIWRRGLLVKGNGLCHGVAGNAYAFLSLWRVTGDAKHLYRPHRFAEF 951
R+T + G+ G+ ALGA ++ + + + ++ K++ + +P E LYG AGYL A LF+ G + + D I+A GR +A + LM+EWHG RY GAAHGL GI +M V + +E +GTL +++ + PSGN+PS E+E DRLV WCHGAPGV L LA+ +FG E F AA + +W+RGLL K G+CHG++GN Y FL+L+R+TGDAK LYR FA F
Sbjct: 102 RVTFLCGQAGISALGAVVAKQSNDDSLCDEYLTIFRKIK---LPKDLPNELLYGRAGYLWACLFINKNLGENTISS--THMVKFKKTIMSCFSVTFCAMIIHLILRFQRTIKDEIIKA--GRKLAT----------RECPLMYEWHGKRYWGAAHGLVGIMNVLMDMVLT-----------------------------EDEMEDVKGTLLYMIKNRFPSGNYPSSEESESDRLVHWCHGAPGVALTLAKAAKVFGGEEFHKAAVEAGEVVWKRGLL-KRVGICHGISGNTYVFLALYRLTGDAKFLYRAKAFASF 370
BLAST of mRNA_P-wetherbeei_contig17238.1.1 vs. uniprot
Match: A0A1D6KRT3_MAIZE (LanC-like protein 2 n=11 Tax=Panicoideae TaxID=147369 RepID=A0A1D6KRT3_MAIZE) HSP 1 Score: 156 bits (394), Expect = 2.930e-40 Identity = 103/287 (35.89%), Postives = 139/287 (48.43%), Query Frame = 1
Query: 106 LLKLQDTAVSDRVPFEQLYGTAGYLSALLFVRSLPGILGAAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVPDSAIRACLGRLVAEGARGAAEAGLQPPALMFEWHGSRYLGAAHGLAGIALAMMQGVRAIHGASSXXXXXXXXXXXXXXXXILLPSPEREALEHARGTLRFLVSLQLPSGNFPSRPEAERDRLVQWCHGAPGVVLALAEGYGLFGDERFAAAAARGSDGIWRRGLLVKGNGLCHGVAGNAYAFLSLWRVTGDAKHLYRPHRFAEFAVSKA 966
L + ++++VP E LYG AGYL A LF+ +P I + ++ EG RG A G P LM+EWHG +Y GAAHGLAGI +M L P + + + TLR+++ + PSGN+PS E D LV WCHGAPGV L LA+ Y +F D+ F +AA ++ +W RGLL K G+CHGV+GNAYAFLSL+R+TG+ ++LYR FA F + KA
Sbjct: 188 LSSFDEITITEKVPNELLYGRAGYLWACLFLNK-------------------------------------HLSEKTIPLDHINSVAKDIINEG-RGFASKGSSP--LMYEWHGKKYWGAAHGLAGIMHVLMH-------------------------TELKPDEQ----DDVKNTLRYMIKNKFPSGNYPSSEGNESDHLVHWCHGAPGVALTLAKAYEVFHDDYFEQSAAEAAEVVWNRGLL-KRVGICHGVSGNAYAFLSLYRLTGNVEYLYRAKAFACFLLEKA 404
BLAST of mRNA_P-wetherbeei_contig17238.1.1 vs. uniprot
Match: A0A7C9CYM9_OPUST (Uncharacterized protein n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9CYM9_OPUST) HSP 1 Score: 152 bits (385), Expect = 3.440e-40 Identity = 103/323 (31.89%), Postives = 155/323 (47.99%), Query Frame = 1
Query: 4 RITLIEGEGGLHALGAALSASAGNSTSAARHVMSLLKLQDTAVSDRVPFEQLYGTAGYLSALLFVRSLPGILGAAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVPDSAIRACLGRLVAEGARGAAEAGLQPPALMFEWHGSRYLGAAHGLAGIALAMMQGVRAIHGASSXXXXXXXXXXXXXXXXILLPSPEREALEHARGTLRFLVSLQLPSGNFPSRPEAERDRLVQWCHGAPGVVLALAEGYGLFGDERFAAAAARGSDGIWRRGLLVKGNGLCHGVAGNAYAFLSLWRVTGDAKHLYRPHRFAEFAVSKAAR 972
++T + G G+ ALGA ++ + G+ ++ K++ +SD +P+E LYG AG+L + LF+ G + S +R + ++ G R G LM+EWHG +Y GAAHGLAGI +M + P+ + E + TL +++ + PSGN+PS +E DRLV WCHGAPGV L +A+ +FGD+ F AA + +W+RGLL K G+CHG++GN Y FL+L+R+TG+A +LYR FA F +A R
Sbjct: 23 KVTFLCGRSGVCALGAVVAKAVGDEHLLDHYLAEFGKIE---LSDDLPYELLYGRAGFLWSCLFLNKHLG-------------------------------------KGTISSSTMRGIVTEVIKPGRR----LGKGGCPLMYEWHGKKYWGAAHGLAGIMHVLMD---------------------------MELKPDEQ--EDVKATLHYMIKGRFPSGNYPSSEGSETDRLVHWCHGAPGVALTIAKAAQVFGDKEFLQAAIDAGEVVWKRGLL-KRVGICHGISGNTYVFLTLYRLTGNALYLYRAKAFASFLDDRARR 271
BLAST of mRNA_P-wetherbeei_contig17238.1.1 vs. uniprot
Match: A0A2K1K1X0_PHYPA (Uncharacterized protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1K1X0_PHYPA) HSP 1 Score: 155 bits (391), Expect = 3.660e-40 Identity = 114/329 (34.65%), Postives = 159/329 (48.33%), Query Frame = 1
Query: 7 ITLIEGEGGLHALGAALSASAGNSTSAARHVMSLLKL---QDTAVSDR-----VPFEQLYGTAGYLSALLFVRSLPGILGAAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVPDSAIRACLGRLVAEGARGAAEAGLQPPALMFEWHGSRYLGAAHGLAGIALAMMQGVRAIHGASSXXXXXXXXXXXXXXXXILLPSPEREALEHARGTLRFLVSLQLPSGNFPSRPEAERDRLVQWCHGAPGVVLALAEGYGLFGDE-RFAAAAARGSDGIWRRGLLVKGNGLCHGVAGNAYAFLSLWRVTGDAKHLYRPHRFAEFAVSKA 966
+T + G+ G++ALGAA + S+G+ S R++ K+ Q AV +P+E LYG AG+L A LFV G EG +P S + ++A G GA++ Q P LM++WHGSRY G AHGLAGI +M P +++ E +GTLR++++ + PSGN+PS DRLV WCHGAPG+ + L + +F DE F AA D +W RGLL K GLCHG++GN Y FLSL++ TG +HL+R +FA F A
Sbjct: 105 VTFLCGQPGIYALGAAAAKSSGDEQSLHRYLQLFHKVSKNQTLAVGAEEGGMGMPYELLYGRAGFLWAALFVNKHVG-----EG--------------------------------TIPSSTTGPIVDAILAGGRAGASQT--QSP-LMYQWHGSRYWGGAHGLAGIMHTLMH----------------------------FPLNKKDE-EDVKGTLRYMIARRFPSGNYPSSEGNATDRLVHWCHGAPGIAMTLCKASKVFPDEMEFQHAAVEAGDVVWSRGLLRK-LGLCHGISGNTYVFLSLYQSTGGKQHLFRAQQFATFLHKNA 363
BLAST of mRNA_P-wetherbeei_contig17238.1.1 vs. uniprot
Match: A0A0D6R7W1_ARACU (Uncharacterized protein n=1 Tax=Araucaria cunninghamii TaxID=56994 RepID=A0A0D6R7W1_ARACU) HSP 1 Score: 155 bits (392), Expect = 4.930e-40 Identity = 113/325 (34.77%), Postives = 153/325 (47.08%), Query Frame = 1
Query: 7 ITLIEGEGGLHALGAALSASAGNSTSAARHVMSLLKLQDTAVSDRVPFEQLYGTAGYLSALLFVRSLPGILGAAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVPDSAIRACLGRLVAEGARGAAEAGLQPP----ALMFEWHGSRYLGAAHGLAGIALAMMQGVRAIHGASSXXXXXXXXXXXXXXXXILLPSPEREALEHARGTLRFLVSLQLPSGNFPSRPEAERDRLVQWCHGAPGVVLALAEGYGLFGDER-FAAAAARGSDGIWRRGLLVKGNGLCHGVAGNAYAFLSLWRVTGDAKHLYRPHRFAEFAVSKA 966
+T I G+ G++ALGAA + + N S ++ K+ + S VP+E LYG AG+L A FV G AE +P SA + ++ AG P LM+EWHG +Y GAAHGLAGI +M H S +EA E +GTL +++ Q SGN+PS E+ DRLV WCHGAPG+ L L + +F +E F AA + +W RGLL + G+CHG++GNAY FL+L R+TGD KHLYR FA F + +A
Sbjct: 147 VTFICGQAGVYALGAAAAKCSENQQSLEHYLSLFKKIPERLQSYDVPYELLYGRAGFLWAAAFVNKYVG----AE---------------------------------TIPTSATVCVVDDIL--------RAGKSLPHKYCPLMYEWHGKKYWGAAHGLAGIMHVLM------HFQLS-----------------------KEAEEDLKGTLHYMIEHQFHSGNYPSSEESSTDRLVHWCHGAPGITLTLCKAAQVFPEENDFQQAAVDAGEVVWNRGLLRR-VGICHGISGNAYVFLALHRLTGDRKHLYRAKAFASFLLDQA 396 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17238.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig17238.1.1 >prot_P-wetherbeei_contig17238.1.1 ID=prot_P-wetherbeei_contig17238.1.1|Name=mRNA_P-wetherbeei_contig17238.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=337bp QRITLIEGEGGLHALGAALSASAGNSTSAARHVMSLLKLQDTAVSDRVPFback to top mRNA from alignment at P-wetherbeei_contig17238:1..1204- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig17238.1.1 ID=mRNA_P-wetherbeei_contig17238.1.1|Name=mRNA_P-wetherbeei_contig17238.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1204bp|location=Sequence derived from alignment at P-wetherbeei_contig17238:1..1204- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig17238:1..1204- >mRNA_P-wetherbeei_contig17238.1.1 ID=mRNA_P-wetherbeei_contig17238.1.1|Name=mRNA_P-wetherbeei_contig17238.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1011bp|location=Sequence derived from alignment at P-wetherbeei_contig17238:1..1204- (Phaeothamnion wetherbeei SAG_119_79)back to top |