mRNA_P-wetherbeei_contig17066.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig17066.1.1 vs. uniprot
Match: A0A8K1FBZ8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FBZ8_PYTOL) HSP 1 Score: 114 bits (285), Expect = 2.840e-28 Identity = 57/123 (46.34%), Postives = 77/123 (62.60%), Query Frame = 1
Query: 13 DFIAGSISGCASIIVGQPFDTIKVRIQTRGHLYKNAVHCFRKTVQAEGPGGLFRGMAPPLATATIVNAVAFSTYAETMRHICNDRDSRAIVHAKEFAAGCFAGGVQCALLTPAELVKCKLQVQ 381
DF +G + GC+ IIVGQPFDT+KVR+QT YK + C R+T EG G F+GM+ PL + NA+ F+TY T+R I ++ S + + F AG G QC +TP EL+KC+LQVQ
Sbjct: 21 DFASGVVGGCSGIIVGQPFDTVKVRLQTHSTFYKGPIDCVRQTFHHEGARGFFKGMSSPLFGSAWTNAIMFATYERTLRLIDDNAQSPKL--SSVFTAGLVGGFFQCTAVTPTELIKCRLQVQ 141
BLAST of mRNA_P-wetherbeei_contig17066.1.1 vs. uniprot
Match: A0A2D4BSP1_PYTIN (Uncharacterized protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BSP1_PYTIN) HSP 1 Score: 115 bits (289), Expect = 2.230e-27 Identity = 60/123 (48.78%), Postives = 79/123 (64.23%), Query Frame = 1
Query: 13 DFIAGSISGCASIIVGQPFDTIKVRIQTRGHLYKNAVHCFRKTVQAEGPGGLFRGMAPPLATATIVNAVAFSTYAETMRHICNDRDSRAIVHAKEFAAGCFAGGVQCALLTPAELVKCKLQVQ 381
DF +G + GC+ IIVGQPFDT+KVR+QT YK A+ C R+T Q EG G F+GM PL + NA+ F+TY T+R I D +S+ F AG F+G Q A +TP +L+KC+LQVQ
Sbjct: 49 DFASGVVGGCSGIIVGQPFDTVKVRLQTHSTFYKGAIDCARQTYQHEGARGFFKGMMSPLFGSAWTNAIMFATYERTLRLI--DDNSQTPELRSVFIAGTFSGFCQTAAVTPTDLIKCRLQVQ 169
BLAST of mRNA_P-wetherbeei_contig17066.1.1 vs. uniprot
Match: A0A1V9XA16_9ACAR (Mitochondrial carnitine/acylcarnitine carrier protein CACL-like n=1 Tax=Tropilaelaps mercedesae TaxID=418985 RepID=A0A1V9XA16_9ACAR) HSP 1 Score: 114 bits (284), Expect = 2.410e-27 Identity = 61/126 (48.41%), Postives = 80/126 (63.49%), Query Frame = 1
Query: 13 DFIAGSISGCASIIVGQPFDTIKVRIQTRGHL---YKNAVHCFRKTVQAEGPGGLFRGMAPPLATATIVNAVAFSTYAETMRHICNDRDSRAIVHAKEFAAGCFAGGVQCALLTPAELVKCKLQVQ 381
DF+ G ISGCA +IVG PFDT+KVR+QT+ Y+N +HCF ++AE GLFRGM P+A VNA+ F Y T R + D+DS + F AG AGGVQ A+ +P EL+K +LQ+Q
Sbjct: 80 DFVVGWISGCAGVIVGHPFDTVKVRLQTQDAAKPKYRNTIHCFTTILKAESAPGLFRGMTSPMAGIPFVNAILFGVYGTT-RKLFTDQDSLST----HFCAGMVAGGVQSAITSPMELIKTRLQLQ 200
BLAST of mRNA_P-wetherbeei_contig17066.1.1 vs. uniprot
Match: H3GBF0_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GBF0_PHYRM) HSP 1 Score: 109 bits (273), Expect = 1.440e-26 Identity = 57/123 (46.34%), Postives = 75/123 (60.98%), Query Frame = 1
Query: 13 DFIAGSISGCASIIVGQPFDTIKVRIQTRGHLYKNAVHCFRKTVQAEGPGGLFRGMAPPLATATIVNAVAFSTYAETMRHICNDRDSRAIVHAKEFAAGCFAGGVQCALLTPAELVKCKLQVQ 381
D AG++ GCA +IVGQPFDT+KVR+Q + Y A+ C RKT+Q EG G F+GM PL + NAV F+ Y T++ I + D ++ F AG G Q L PAEL+KC+LQVQ
Sbjct: 13 DLAAGTVGGCAGVIVGQPFDTVKVRLQIQSKFYNGALDCTRKTLQHEGFQGFFKGMTSPLIGSAATNAVMFAVYERTLKMIDDTPDKPSLTSV--FYAGAIGGFWQTVPLAPAELIKCRLQVQ 133
BLAST of mRNA_P-wetherbeei_contig17066.1.1 vs. uniprot
Match: UPI0002659680 (mitochondrial basic amino acids transporter n=1 Tax=Galendromus occidentalis TaxID=34638 RepID=UPI0002659680) HSP 1 Score: 108 bits (270), Expect = 7.700e-26 Identity = 60/133 (45.11%), Postives = 80/133 (60.15%), Query Frame = 1
Query: 13 DFIAGSISGCASIIVGQPFDTIKVRIQT---RGHLYKNAVHCFRKTVQAEGPGGLFRGMAPPLATATIVNAVAFSTYAETMRHICNDRDSRAIVHAKEFAAGCFAGGVQCALLTPAELVKCKLQVQAAGTFSA 402
DF+AG I GCA ++VG PFDT+KVR+QT R +Y+ HC R + + GLFRGM+ P+ ++VNA+ F Y T R +D+DS F AG AG VQ + +P ELVK +LQVQA T +A
Sbjct: 2 DFVAGCIGGCAGVLVGHPFDTVKVRLQTQDPRNPVYRGTFHCLRSIIAKDSVSGLFRGMSSPMVGVSVVNAIVFGVYGCTSRQF-SDQDSLKT----HFVAGMVAGSVQSFVTSPLELVKTRLQVQADTTPTA 129
BLAST of mRNA_P-wetherbeei_contig17066.1.1 vs. uniprot
Match: A0A7S2NDB1_9DINO (Hypothetical protein (Fragment) n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2NDB1_9DINO) HSP 1 Score: 107 bits (267), Expect = 9.840e-26 Identity = 63/130 (48.46%), Postives = 76/130 (58.46%), Query Frame = 1
Query: 1 RMDADFIAGSISGCASIIVGQPFDTIKVRIQTRGHLYKNAVHCFRKTVQAEGPGGLFRGMAPPLATATIVNAVAFSTYAETMRHICNDRDSRAIVHA---KEFAAGCFAGGVQCALLTPAELVKCKLQVQ 381
R + I G + G S++VG PFDTIKVR Q Y AV C R T++ EGP LF+GM PL T + + A+ FST+ E R + D VHA K FAAG AG VQC L TP ELV+ KLQVQ
Sbjct: 7 RYAVESIGGFLGGSVSVVVGHPFDTIKVRQQAGQEAYAGAVDCVRTTLRTEGPRALFKGMLSPLLTNSAMGALTFSTWQEAQRLLHVDE----AVHAPLGKVFAAGAIAGVVQCVLATPMELVRTKLQVQ 132
BLAST of mRNA_P-wetherbeei_contig17066.1.1 vs. uniprot
Match: A0A024GRU4_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GRU4_9STRA) HSP 1 Score: 107 bits (267), Expect = 1.040e-25 Identity = 51/123 (41.46%), Postives = 76/123 (61.79%), Query Frame = 1
Query: 13 DFIAGSISGCASIIVGQPFDTIKVRIQTRGHLYKNAVHCFRKTVQAEGPGGLFRGMAPPLATATIVNAVAFSTYAETMRHICNDRDSRAIVHAKEFAAGCFAGGVQCALLTPAELVKCKLQVQ 381
D ++G +GCA + VGQPFDTIKVR+QT G YK + C ++T + EG G F+G++ PL + NA+ FS Y + ++++ D ++ F AGC G Q +TP +L+KC+LQVQ
Sbjct: 10 DVVSGVTAGCAGVFVGQPFDTIKVRLQTHGTFYKGPIDCAKQTFKHEGIHGFFKGLSSPLIGSACTNAIVFSIYEKALKYLGTDEKHPSLDSV--FIAGCLGGFCQTIAVTPTDLIKCRLQVQ 130
BLAST of mRNA_P-wetherbeei_contig17066.1.1 vs. uniprot
Match: A0A7M7K9I8_VARDE (Uncharacterized protein n=2 Tax=Varroa destructor TaxID=109461 RepID=A0A7M7K9I8_VARDE) HSP 1 Score: 107 bits (267), Expect = 2.080e-25 Identity = 59/129 (45.74%), Postives = 81/129 (62.79%), Query Frame = 1
Query: 13 DFIAGSISGCASIIVGQPFDTIKVRIQTRGHL---YKNAVHCFRKTVQAEGPGGLFRGMAPPLATATIVNAVAFSTYAETMRHICNDRDSRAIVHAKEFAAGCFAGGVQCALLTPAELVKCKLQVQAAG 390
DF+AG +SGCA +IVG PFDTIKVR+QT+G + YK +HCF ++ E GLFRGM+ +A +VNAV F Y T R + D+D+ + F +G AGG Q + +P EL+K +LQ+Q G
Sbjct: 2 DFVAGWVSGCAGLIVGHPFDTIKVRLQTQGAVKLKYKGTIHCFTTILKTESVAGLFRGMSSLMAGIPLVNAVLFGVYGNT-RKLFADQDALST----HFYSGMIAGGAQSFITSPMELIKTRLQLQDEG 125
BLAST of mRNA_P-wetherbeei_contig17066.1.1 vs. uniprot
Match: A0A3R7Y4S0_9STRA (Uncharacterized protein n=10 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7Y4S0_9STRA) HSP 1 Score: 107 bits (266), Expect = 3.000e-25 Identity = 61/128 (47.66%), Postives = 78/128 (60.94%), Query Frame = 1
Query: 1 RMDADFIAGSISGCASIIVGQPFDTIKVRIQTRGHLYKNAVHCFRKTVQAEGPGGLFRGMAPPLATATIVNAVAFSTYAETMRHICNDRDSRAIVHAKE-FAAGCFAGGVQCALLTPAELVKCKLQVQ 381
R D+ AG + G IIVGQPFDTIKVR+QT G Y + HC R TVQ EG GLF+G+A PL + +NA+ F + T+R + DS A+ F AG AG VQ ++ P +LVKC+LQVQ
Sbjct: 23 RAAIDYAAGCLGGVMGIIVGQPFDTIKVRLQTHGAHYTSPWHCARHTVQHEGVRGLFKGLASPLVGSVPINALVFGVHGSTLRAL----DSAAMPSLSSVFYAGSIAGFVQSFVVAPTDLVKCQLQVQ 146
BLAST of mRNA_P-wetherbeei_contig17066.1.1 vs. uniprot
Match: W7TZC0_9STRA (Solute carrier family 25 member 45 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TZC0_9STRA) HSP 1 Score: 106 bits (265), Expect = 5.460e-25 Identity = 57/122 (46.72%), Postives = 82/122 (67.21%), Query Frame = 1
Query: 16 FIAGSISGCASIIVGQPFDTIKVRIQTRGHLYKNAVHCFRKTVQAEGPGGLFRGMAPPLATATIVNAVAFSTYAETMRHICN-DRDSRAI-VHAKEFAAGCFAGGVQCALLTPAELVKCKLQ 375
F+AG G S+ VGQPFDTIKVR+Q +K A+ C R+ + EGP LF+GM+ P+ +A+ VNA+ F++Y ETM I D ++R + + F AG AG +QC++LTP+EL+KC+LQ
Sbjct: 26 FVAGCAGGVVSLAVGQPFDTIKVRLQASTK-FKGAIDCLRRLLATEGPLALFKGMSSPVLSASFVNAIVFTSYNETMTLIKKTDPEARKRPTYEQVFLAGSVAGALQCSVLTPSELIKCRLQ 146 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17066.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig17066.1.1 >prot_P-wetherbeei_contig17066.1.1 ID=prot_P-wetherbeei_contig17066.1.1|Name=mRNA_P-wetherbeei_contig17066.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=135bp MDADFIAGSISGCASIIVGQPFDTIKVRIQTRGHLYKNAVHCFRKTVQAEback to top mRNA from alignment at P-wetherbeei_contig17066:58..465- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig17066.1.1 ID=mRNA_P-wetherbeei_contig17066.1.1|Name=mRNA_P-wetherbeei_contig17066.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=408bp|location=Sequence derived from alignment at P-wetherbeei_contig17066:58..465- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig17066:58..465- >mRNA_P-wetherbeei_contig17066.1.1 ID=mRNA_P-wetherbeei_contig17066.1.1|Name=mRNA_P-wetherbeei_contig17066.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=405bp|location=Sequence derived from alignment at P-wetherbeei_contig17066:58..465- (Phaeothamnion wetherbeei SAG_119_79)back to top |