prot_P-wetherbeei_contig17037.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-wetherbeei_contig17037.1.1
Unique Name	prot_P-wetherbeei_contig17037.1.1
Type	polypeptide
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length	171

Homology

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BLAST of mRNA_P-wetherbeei_contig17037.1.1 vs. uniprot
Match: A0A6A8QEA8_9PROT (Shikimate kinase n=1 Tax=Telmatospirillum sp. TaxID=2079197 RepID=A0A6A8QEA8_9PROT)

HSP 1 Score: 225 bits (574), Expect = 1.290e-72
Identity = 109/164 (66.46%), Postives = 134/164 (81.71%), Query Frame = 0

Query:    1 MVGLMGAGKTAIGKRLAARLALPFVDTDKEIEQAAGCAIPEIFARYGEPAFRDGERRVIARLLAGPRCVLATGGGAFMDPETRAAVKAAGLSVWLKADLDTLVRRTARRTNRPLLNRGNPRDVLANLMDARYPVYAEADIHVQSLESPPDETTSRVVDALSRHF 164
            +VGLMGAGK+ +G+RLA RL LPF+D D EIE AAGC+I EIFARYGE AFRDGER+V+ RLLAGPRCVLATGGGAFMDPETRA +   G+SVW++ADLD LV+RTA R +RPLL +G+PR++L  L+  RYPVYA AD+ V + + PP+ T  RV+DAL+RH 
Sbjct:   14 LVGLMGAGKSCVGRRLAQRLGLPFIDADTEIEAAAGCSISEIFARYGEGAFRDGERKVVGRLLAGPRCVLATGGGAFMDPETRALIAEKGISVWIRADLDLLVKRTAGRDHRPLLRQGDPREILGRLIADRYPVYAAADLAVDTADRPPEFTVDRVLDALARHL 177

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BLAST of mRNA_P-wetherbeei_contig17037.1.1 vs. uniprot
Match: UPI000419F21D (shikimate kinase n=1 Tax=Niveispirillum irakense TaxID=34011 RepID=UPI000419F21D)

HSP 1 Score: 223 bits (568), Expect = 9.890e-72
Identity = 114/168 (67.86%), Postives = 134/168 (79.76%), Query Frame = 0

Query:    1 MVGLMGAGKTAIGKRLAARLALPFVDTDKEIEQAAGCAIPEIFARYGEPAFRDGERRVIARLLAGPRCVLATGGGAFMDPETRAAVKAAGLSVWLKADLDTLVRRTARRTNRPLLNRGNPRDVLANLMDARYPVYAEADIHVQSLESPPDETTSRVVDALSRHFETAA 168
            ++GLMGAGKT+IGKRLAARL LPFVD D EIE+AAGC I EIF R+GE  FRDGERRVIARLL  P  VL+TGGGAFMD ETR  ++  GLS+WL+ADLD LV RTARR +RPLL +G+PR+VL  LMDARYPVYAEAD+ V S +SPP+ TT RV++ L +H    A
Sbjct:   16 LIGLMGAGKTSIGKRLAARLGLPFVDADNEIERAAGCTIQEIFDRFGEAGFRDGERRVIARLLEQPVHVLSTGGGAFMDAETRGLIRERGLSLWLRADLDLLVHRTARRDHRPLLRQGDPREVLQRLMDARYPVYAEADLVVDSDDSPPEVTTERVLETLRQHLAVPA 183

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BLAST of mRNA_P-wetherbeei_contig17037.1.1 vs. uniprot
Match: B6IUW9_RHOCS (Shikimate kinase n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) TaxID=414684 RepID=B6IUW9_RHOCS)

HSP 1 Score: 223 bits (567), Expect = 2.080e-71
Identity = 118/168 (70.24%), Postives = 130/168 (77.38%), Query Frame = 0

Query:    1 MVGLMGAGKTAIGKRLAARLALPFVDTDKEIEQAAGCAIPEIFARYGEPAFRDGERRVIARLLAGPRCVLATGGGAFMDPETRAAVKAAGLSVWLKADLDTLVRRTARRTNRPLLNRGNPRDVLANLMDARYPVYAEADIHVQSLESPPDETTSRVVDALSRHFETAA 168
            +VGLMGAGKT+IGKRLAA+L LPFVD D EIE AAGC I EIF R+GE  FRDGERRVIARLL G   VL+TGGGAFM PETRA ++  GLSVWL+A LD LV RT RR NRPLL +GNPRD+LA LM  RYPVYAEADI V S E PP+ET  RV+ AL  H   AA
Sbjct:   15 LVGLMGAGKTSIGKRLAAKLHLPFVDADHEIESAAGCTIQEIFDRFGEAQFRDGERRVIARLLEGQVRVLSTGGGAFMHPETRALIRERGLSVWLRAPLDLLVARTGRRDNRPLLKQGNPRDILAALMAQRYPVYAEADITVDSDERPPEETAERVLAALRHHLAAAA 182

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BLAST of mRNA_P-wetherbeei_contig17037.1.1 vs. uniprot
Match: A0A858R9D7_9PROT (Shikimate kinase n=1 Tax=Rhodospirillaceae bacterium B3 TaxID=2728875 RepID=A0A858R9D7_9PROT)

HSP 1 Score: 222 bits (565), Expect = 3.560e-71
Identity = 116/164 (70.73%), Postives = 132/164 (80.49%), Query Frame = 0

Query:    1 MVGLMGAGKTAIGKRLAARLALPFVDTDKEIEQAAGCAIPEIFARYGEPAFRDGERRVIARLLAGPRCVLATGGGAFMDPETRAAVKAAGLSVWLKADLDTLVRRTARRTNRPLLNRGNPRDVLANLMDARYPVYAEADIHVQSLESPPDETTSRVVDALSRHF 164
            ++GLMGAGKT+IGKRLA RL LPFVD D EIE+AAGC I EIF RYGE  FRDGERRVIARLL  P  VL+TGGGAFMDP TRA ++  GLSVWL+ADLD LV RTARR +RPLL +G+PR+VL +LM+ RYPVYAEAD+ V S +SPPD TT RVV AL  H 
Sbjct:   20 LIGLMGAGKTSIGKRLATRLHLPFVDADHEIERAAGCTIQEIFDRYGEAGFRDGERRVIARLLDQPVQVLSTGGGAFMDPITRALIRDKGLSVWLRADLDLLVHRTARRDHRPLLRQGDPREVLRSLMEKRYPVYAEADLTVDSDDSPPDVTTDRVVAALRDHL 183

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BLAST of mRNA_P-wetherbeei_contig17037.1.1 vs. uniprot
Match: UPI000E6AD39F (shikimate kinase n=1 Tax=Indioceanicola profundi TaxID=2220096 RepID=UPI000E6AD39F)

HSP 1 Score: 221 bits (564), Expect = 5.950e-71
Identity = 113/164 (68.90%), Postives = 133/164 (81.10%), Query Frame = 0

Query:    1 MVGLMGAGKTAIGKRLAARLALPFVDTDKEIEQAAGCAIPEIFARYGEPAFRDGERRVIARLLAGPRCVLATGGGAFMDPETRAAVKAAGLSVWLKADLDTLVRRTARRTNRPLLNRGNPRDVLANLMDARYPVYAEADIHVQSLESPPDETTSRVVDALSRHF 164
            +VGLMGAGKT+IG+RLA RL LPFVD D EIE AAGC IPEIF R+GE  FRDGER+VIARLL GP  VL+TGGGAFMD ETRA ++  GLSVWL+A+LD LV+RTARR +RPLL  G+PR++L  LM+ RYPVYAEAD+ V S +SP +ETT RVV+AL  H 
Sbjct:   19 LVGLMGAGKTSIGRRLATRLGLPFVDADHEIEAAAGCTIPEIFERFGEAGFRDGERKVIARLLDGPVHVLSTGGGAFMDQETRALIREKGLSVWLRAELDLLVQRTARRDHRPLLRSGDPREILRGLMEKRYPVYAEADLTVDSDDSPLEETTDRVVEALHLHL 182

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BLAST of mRNA_P-wetherbeei_contig17037.1.1 vs. uniprot
Match: UPI001A965C8E (shikimate kinase n=1 Tax=Arenibaculum pallidiluteum TaxID=2812559 RepID=UPI001A965C8E)

HSP 1 Score: 219 bits (557), Expect = 2.410e-70
Identity = 112/163 (68.71%), Postives = 133/163 (81.60%), Query Frame = 0

Query:    5 MGAGKTAIGKRLAARLALPFVDTDKEIEQAAGCAIPEIFARYGEPAFRDGERRVIARLLAG-PRCVLATGGGAFMDPETRAAVKAAGLSVWLKADLDTLVRRTARRTNRPLLNRGNPRDVLANLMDARYPVYAEADIHVQSLESPPDETTSRVVDALSRHFET 166
            MGAGKT++GKRLAARL LPF D D EIE AAGC I EIFAR+GE  FR GER+VIARLL   P  VLATGGGAFMDP+TR  V++ G+SVWLKADLD L RRTARRTNRPLLN+G+PR+ LA L+  RYPVYAEAD+ V+S + PP++T  +V+DA++RH ET
Sbjct:    1 MGAGKTSVGKRLAARLGLPFRDADTEIESAAGCTIEEIFARFGEAEFRAGERKVIARLLQEEPVHVLATGGGAFMDPDTRGLVRSQGISVWLKADLDVLARRTARRTNRPLLNKGDPRETLARLIALRYPVYAEADLTVESEDVPPEKTVEKVLDAIARHLET 163

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BLAST of mRNA_P-wetherbeei_contig17037.1.1 vs. uniprot
Match: A0A7C9UXJ0_9PROT (Shikimate kinase n=1 Tax=Magnetospirillum aberrantis SpK TaxID=908842 RepID=A0A7C9UXJ0_9PROT)

HSP 1 Score: 219 bits (558), Expect = 3.280e-70
Identity = 104/165 (63.03%), Postives = 134/165 (81.21%), Query Frame = 0

Query:    1 MVGLMGAGKTAIGKRLAARLALPFVDTDKEIEQAAGCAIPEIFARYGEPAFRDGERRVIARLLAGPRCVLATGGGAFMDPETRAAVKAAGLSVWLKADLDTLVRRTARRTNRPLLNRGNPRDVLANLMDARYPVYAEADIHVQSLESPPDETTSRVVDALSRHFE 165
            +VGLMGAGK+ +G+RLAARL +PFVD D E E AAGC+I + FARYGEPAFR+GER+VIARL+ GP CVLATGGGAF DPETR  +K   +SVW++ADLD LV+RT+ R +RPLL  G+PR++L+ LMDARYP+YA+ADI V + + PP+ T ++V+D L+R  E
Sbjct:   19 LVGLMGAGKSCVGRRLAARLGIPFVDADSEFEAAAGCSIADFFARYGEPAFREGERKVIARLMEGPLCVLATGGGAFCDPETRDRIKQGAMSVWIRADLDLLVKRTSGRDHRPLLKTGDPREILSRLMDARYPLYAQADIIVDTTDEPPEVTVAKVLDELARTLE 183

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BLAST of mRNA_P-wetherbeei_contig17037.1.1 vs. uniprot
Match: UPI001D048595 (shikimate kinase n=1 Tax=Pelagibius sp. NBU2595 TaxID=2762760 RepID=UPI001D048595)

HSP 1 Score: 219 bits (558), Expect = 6.100e-70
Identity = 109/170 (64.12%), Postives = 135/170 (79.41%), Query Frame = 0

Query:    1 MVGLMGAGKTAIGKRLAARLALPFVDTDKEIEQAAGCAIPEIFARYGEPAFRDGERRVIARLLAGPRCVLATGGGAFMDPETRAAVKAAGLSVWLKADLDTLVRRTARRTNRPLLNRGNPRDVLANLMDARYPVYAEADIHVQSLESPPDETTSRVVDALSRHFETAARA 170
            +VGLMGAGK+ IG+ LAA L LPFVD DKEIE AAGC+I +IFA +GE AFRDGERRVIARLL  P+ VLATGGGAF+DPETR  ++    SVWL+AD+D L+RRT+RR NRPLL RG+PR +L +L++ RYPVYAEAD+ V S++ PP+ T +RV+  L RHFE +  A
Sbjct:   25 LVGLMGAGKSCIGRLLAASLDLPFVDADKEIEAAAGCSIEDIFAAHGEEAFRDGERRVIARLLDEPKMVLATGGGAFLDPETRQLIRERATSVWLRADVDLLLRRTSRRNNRPLLKRGDPRQILNDLIEQRYPVYAEADVVVDSVDGPPETTLARVIKGLRRHFEESGAA 194

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BLAST of mRNA_P-wetherbeei_contig17037.1.1 vs. uniprot
Match: A0A239G622_9PROT (Shikimate kinase n=2 Tax=Azospirillaceae TaxID=2829815 RepID=A0A239G622_9PROT)

HSP 1 Score: 219 bits (557), Expect = 6.900e-70
Identity = 114/165 (69.09%), Postives = 133/165 (80.61%), Query Frame = 0

Query:    1 MVGLMGAGKTAIGKRLAARLALPFVDTDKEIEQAAGCAIPEIFARYGEPAFRDGERRVIARLLAGPRC-VLATGGGAFMDPETRAAVKAAGLSVWLKADLDTLVRRTARRTNRPLLNRGNPRDVLANLMDARYPVYAEADIHVQSLESPPDETTSRVVDALSRHF 164
            ++GLMGAGKT+IGKRLAARL LPFVD D EIE+AAGC I EIF R+GE  FRDGERRVIARLL  P   VL+TGGGAFMD +TRA ++  GLSVWL+ADLD LV+RTARR +RPLL +G PR+VL  LM+ RYPVYAEAD+ V S +SPPD+TT RV+ AL  H 
Sbjct:   16 LIGLMGAGKTSIGKRLAARLGLPFVDADHEIERAAGCTIQEIFDRFGEAGFRDGERRVIARLLEQPPVQVLSTGGGAFMDAQTRAMIRDHGLSVWLRADLDLLVQRTARRDHRPLLRQGEPREVLGRLMEIRYPVYAEADLTVDSDDSPPDQTTERVLAALRAHL 180

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BLAST of mRNA_P-wetherbeei_contig17037.1.1 vs. uniprot
Match: A0A2E8XNM5_9PROT (Shikimate kinase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2E8XNM5_9PROT)

HSP 1 Score: 218 bits (556), Expect = 1.040e-69
Identity = 110/160 (68.75%), Postives = 132/160 (82.50%), Query Frame = 0

Query:    1 MVGLMGAGKTAIGKRLAARLALPFVDTDKEIEQAAGCAIPEIFARYGEPAFRDGERRVIARLLAGPRCVLATGGGAFMDPETRAAVKAAGLSVWLKADLDTLVRRTARRTNRPLLNRGNPRDVLANLMDARYPVYAEADIHVQSLESPPDETTSRVVDAL 160
            MVGLMGAGK++IG+RLA+RL LPFVD D EIE AAGC I E F R+GE AFRDGERRVIARLL GPR VLATGGGAFMD +TR A+  +G+SVWL+ADL+TLVRRT+RR++RPLLN  +P + L NLM+ RYP+Y +ADI V+S + PPD+T  RVV AL
Sbjct:   29 MVGLMGAGKSSIGRRLASRLDLPFVDADSEIEAAAGCTIAEFFERHGEAAFRDGERRVIARLLDGPRKVLATGGGAFMDEDTREAIGRSGISVWLRADLETLVRRTSRRSDRPLLNNDDPAETLKNLMETRYPIYEQADIDVESDDGPPDQTVDRVVAAL 188

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig17037.1.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig17037.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6A8QEA8_9PROT	1.290e-72	66.46	Shikimate kinase n=1 Tax=Telmatospirillum sp. TaxI...	[more]
UPI000419F21D	9.890e-72	67.86	shikimate kinase n=1 Tax=Niveispirillum irakense T...	[more]
B6IUW9_RHOCS	2.080e-71	70.24	Shikimate kinase n=1 Tax=Rhodospirillum centenum (...	[more]
A0A858R9D7_9PROT	3.560e-71	70.73	Shikimate kinase n=1 Tax=Rhodospirillaceae bacteri...	[more]
UPI000E6AD39F	5.950e-71	68.90	shikimate kinase n=1 Tax=Indioceanicola profundi T...	[more]
UPI001A965C8E	2.410e-70	68.71	shikimate kinase n=1 Tax=Arenibaculum pallidiluteu...	[more]
A0A7C9UXJ0_9PROT	3.280e-70	63.03	Shikimate kinase n=1 Tax=Magnetospirillum aberrant...	[more]
UPI001D048595	6.100e-70	64.12	shikimate kinase n=1 Tax=Pelagibius sp. NBU2595 Ta...	[more]
A0A239G622_9PROT	6.900e-70	69.09	Shikimate kinase n=2 Tax=Azospirillaceae TaxID=282...	[more]
A0A2E8XNM5_9PROT	1.040e-69	68.75	Shikimate kinase n=1 Tax=Alphaproteobacteria bacte...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR01100	SHIKIMTKNASE	coord: 90..107 score: 29.06 coord: 69..78 score: 56.15 coord: 51..59 score: 45.3 coord: 4..19 score: 24.52
None	No IPR available	PANTHER	PTHR21087	SHIKIMATE KINASE	coord: 1..146
None	No IPR available	PANTHER	PTHR21087:SF16	SHIKIMATE KINASE 1, CHLOROPLASTIC	coord: 1..146
IPR031322	Shikimate kinase/gluconokinase	PFAM	PF01202	SKI	coord: 5..160 e-value: 9.6E-46 score: 155.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 1..169 e-value: 2.5E-52 score: 179.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 1..162
IPR023000	Shikimate kinase, conserved site	PROSITE	PS01128	SHIKIMATE_KINASE	coord: 52..77
IPR000623	Shikimate kinase/Threonine synthase-like 1	HAMAP	MF_00109	Shikimate_kinase	coord: 1..161 score: 25.01059
IPR000623	Shikimate kinase/Threonine synthase-like 1	CDD	cd00464	SK	coord: 1..151 e-value: 1.1191E-66 score: 198.549

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig17037	contig	P-wetherbeei_contig17037:576..1088 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig17037.1.1	mRNA_P-wetherbeei_contig17037.1.1	Phaeothamnion wetherbeei SAG_119_79	mRNA	P-wetherbeei_contig17037 576..1109 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-wetherbeei_contig17037.1.1 ID=prot_P-wetherbeei_contig17037.1.1|Name=mRNA_P-wetherbeei_contig17037.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=171bp
MVGLMGAGKTAIGKRLAARLALPFVDTDKEIEQAAGCAIPEIFARYGEPA
FRDGERRVIARLLAGPRCVLATGGGAFMDPETRAAVKAAGLSVWLKADLD
TLVRRTARRTNRPLLNRGNPRDVLANLMDARYPVYAEADIHVQSLESPPD
ETTSRVVDALSRHFETAARA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR031322	Shikimate/glucono_kinase
IPR027417	P-loop_NTPase
IPR023000	Shikimate_kinase_CS
IPR000623	Shikimate_kinase/TSH1