mRNA_P-wetherbeei_contig1690.4.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1690.4.2 vs. uniprot
Match: A0A6A3MY24_9STRA (Uncharacterized protein n=6 Tax=Phytophthora TaxID=4783 RepID=A0A6A3MY24_9STRA) HSP 1 Score: 199 bits (506), Expect = 2.270e-57 Identity = 126/306 (41.18%), Postives = 163/306 (53.27%), Query Frame = 1
Query: 13 LTLAQTRGLEPQPAPALTGADWVAVEQEAARCGRGKSPCAICRESFKCSRQALLSCGHIFHAACLSSFERFTRTRNEAERCPLCRNSGYQKCTTMLGTQAWRQACAIKVQAWIRGRLARRQLRRLFRARYRGGRGDSECRRRFFASELGECASRMEKDVGIRAESLDMLFAELDAGLAFSREVFNTQRAAPACDHGIEACTPSSCRISGWQAAEASPASGIREDGKAAELEAWAVAFARARERDTLECPICMNDMCSLFAPRPVLLLSCSHVMHLACLHSFEDFGGGAGGVSPGCPVCRSTYKSTT 930
LTLAQ RGL +P P LT +W EQ+A G + PC+ICRESF Q +LSC H+FH AC++SFERF RT CPLCR YQK T + + R A ++QA +RG LARRQ L++ Y G+GD RRRFFA+ +G+ R+ + R +S+D L AE D L+ SR VF D+ E E PA+G G + W F +A+ R+ EC IC+N S A V LLSCSH H CL +FEDF + CPVCR++Y+S T
Sbjct: 128 LTLAQKRGLVKRPPPKLTRDEWEDCEQQAEARGDTQHPCSICRESFGVKEQVILSCSHMFHLACITSFERFLRTNQRV--CPLCRKQNYQKRNTTMASAFHRDYSAKRIQAVLRGFLARRQAAGLWQKFYSSGKGDPIRRRRFFANRVGKTTDRLVTAMSKRDDSIDALLAEFDKSLSMSRRVFQ--------DNAPET--------------ETDPATGASFPGG----DDWLAIFNKAKARNESECAICINSFGSSMAG--VSLLSCSHAFHSQCLSAFEDFNIYEVSL---CPVCRASYRSQT 400
BLAST of mRNA_P-wetherbeei_contig1690.4.2 vs. uniprot
Match: A0A329SK16_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A329SK16_9STRA) HSP 1 Score: 192 bits (489), Expect = 4.620e-55 Identity = 124/306 (40.52%), Postives = 157/306 (51.31%), Query Frame = 1
Query: 13 LTLAQTRGLEPQPAPALTGADWVAVEQEAARCGRGKSPCAICRESFKCSRQALLSCGHIFHAACLSSFERFTRTRNEAERCPLCRNSGYQKCTTMLGTQAWRQACAIKVQAWIRGRLARRQLRRLFRARYRGGRGDSECRRRFFASELGECASRMEKDVGIRAESLDMLFAELDAGLAFSREVFNTQRAAPACDHGIEACTPSSCRISGWQAAEASPASGIREDGKAAELEAWAVAFARARERDTLECPICMNDMCSLFAPRPVLLLSCSHVMHLACLHSFEDFGGGAGGVSPGCPVCRSTYKSTT 930
LTLAQ RGL +P P LT +W EQ+A G K PC+ICRE F Q +LSC H+FH C++SFERF RT CPLCR YQK T + + R+ A ++QA RG RRQ L++ Y G+GD RRRFFA+ +G+ R+ + R +S+D L AE D L+ SR VF Q P D PA+GI G + W F +AR RD EC IC+N S + + V LLSCSH H CL +FE F + CPVCR+ Y S T
Sbjct: 112 LTLAQKRGLVSRPRPKLTRDEWEHCEQQAQARGDTKDPCSICREPFGVKEQVILSCSHMFHLDCITSFERFLRTNQHV--CPLCRKQDYQKRCTTVASAFHREHSANRIQAVFRGFATRRQAATLWQKFYSSGKGDPTRRRRFFANRVGKTTDRLVTAMSKRDDSIDALLAEFDKSLSMSRRVF--QGHVPETD--------------------TDPATGIPFPGG----DDWLAIFTKARARDERECAICINPFSS--SMKGVSLLSCSHAFHSQCLSAFEHFNIYEVSL---CPVCRAGYHSQT 384
BLAST of mRNA_P-wetherbeei_contig1690.4.2 vs. uniprot
Match: A0A1V9Y8L0_9STRA (RING finger protein 32-like n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y8L0_9STRA) HSP 1 Score: 185 bits (469), Expect = 1.090e-52 Identity = 117/307 (38.11%), Postives = 158/307 (51.47%), Query Frame = 1
Query: 1 RTLALTLAQTRGLEPQPAPALTGADWVAVEQEAARCGRGKSPCAICRESFKCSRQALLSCGHIFHAACLSSFERFTRTRNEAERCPLCRNSGYQKCTTMLGTQAWRQACAIKVQAWIRGRLARRQLRRLFRARYRGGRGDSECRRRFFASELGECASRMEKDVGIRAESLDMLFAELDAGLAFSREVFNTQRAAPACDHGIEACTPSSCRISGWQAAEASPASGIREDGKAAELEAWAVAFARARERDTLECPICMNDMCSLFAPRPVLLLSCSHVMHLACLHSFEDFGGGAGGVSPGCPVCRSTYK 921
R L LTLAQ +GL P P L+ W E +A G PC+ICRE F + +LSC H+FH CL+SFERF RT A CPLCR YQK T G +++ACAIK+QA++RG L R+ L Y+ G GD + R F+AS++ +SR+ + + RA+S+D L A+ D + SR VFN A D K + WA A +A R+ ECPIC+N + S +P++LL+CSHV H CL++FE F + CPVCR Y+
Sbjct: 60 RRLKLTLAQKKGLVACPEPKLSINQWEECEFQAEERGDPAYPCSICREPFGVLPKVILSCSHMFHHNCLTSFERFLRTN--ARVCPLCRKQNYQKKLTKRGELHYKKACAIKMQAFVRGFLTRQHYPELLNQYYKQGYGDPKRRALFYASKISSISSRIVRAMDSRADSIDALLAQFDQTVILSRSVFNPTEAI---------------------------------DTKCQTSDKWASALLKATTREENECPICINAIDS----KPMMLLNCSHVFHTDCLNAFESFNIYEVHL---CPVCRCNYE 324
BLAST of mRNA_P-wetherbeei_contig1690.4.2 vs. uniprot
Match: A0A8K1C7G8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C7G8_PYTOL) HSP 1 Score: 184 bits (466), Expect = 6.730e-52 Identity = 117/295 (39.66%), Postives = 149/295 (50.51%), Query Frame = 1
Query: 49 PAPALTGADWVAVEQEAARCGRGKSPCAICRESFKCSRQALLSCGHIFHAACLSSFERFTRTRNEAERCPLCRNSGYQKCTTMLGTQAWRQACAIKVQAWIRGRLARRQLRRLFRARYRGGRGDSECRRRFFASELGECASRMEKDVGIRAESLDMLFAELDAGLAFSREVFNTQRAAPACDHGIEACTPSSCRISGWQAAEASPASGIREDGKAAELEAWAVAFARARERDTLECPICMN----DMCSLFAPRPVLLLSCSHVMHLACLHSFEDFGGGAGGVSPGCPVCRSTYK 921
P P L+ DW E +A G PC+ICRESF Q +LSC H+FH AC+ SFERF RT+ CPLCR YQK T+ G R CA+++Q RG RR+L L+ YR G+GD RRRF A+ +G+ R+ + R +S+D L AE D L+ SR+VF+ + P D PS G W F +AR RD ECPIC+N DM + V LLSCSH H CLH+FEDF P CPVCR++Y+
Sbjct: 101 PPPKLSRDDWERCENQALERGDVNHPCSICRESFGVQEQVILSCSHMFHLACIQSFERFLRTKQRV--CPLCRKDNYQKRATVKGAVIHRDKCALRIQTMFRGFRERRRLDSLWHQFYRQGKGDPVRRRRFLANRIGKTTDRLVGAMRARDDSIDALLAEFDKTLSLSRQVFDPSQ--PQTDDD-----PSFPTRRGVD---------------------WLAVFEKARLRDERECPICINAFSVDMTN------VTLLSCSHCFHHDCLHAFEDFNIYE---VPLCPVCRASYQ 356
BLAST of mRNA_P-wetherbeei_contig1690.4.2 vs. uniprot
Match: T0QW99_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QW99_SAPDV) HSP 1 Score: 184 bits (466), Expect = 8.410e-52 Identity = 112/284 (39.44%), Postives = 149/284 (52.46%), Query Frame = 1
Query: 13 LTLAQTRGLEPQPAPALTGADWVAVEQEAARCGRGKSPCAICRESFKCSRQALLSCGHIFHAACLSSFERFTRTRNEAERCPLCRNSGYQKCTTMLGTQAWRQACAIKVQAWIRGRLARRQLRRLFRARYRGGRGDSECRRRFFASELGECASRMEKDVGIRAESLDMLFAELDAGLAFSREVFNTQRAAPACDHGIEACTPSSCRISGWQAAEASPASGIREDGKAAELEAWAVAFARARERDTLECPICMNDMCSLFAPRPVLLLSCSHVMHLACLHSFEDF 864
LTLAQ +GL P P P L W VEQ+A G + PC+ICRE F + LLSC H+FH CL+SFERF RT + CPLCR Y+K T G +R CA ++QA IRG LARR+ L Y+ G GD R F+AS++ +SR+ + + RA+S+D L AE D ++ SR +FN + + + A+ AW A A+A R+ ECPIC+N M + + V LLSCSHV+H CL +FE F
Sbjct: 107 LTLAQKKGLVPGPPPRLNNNQWEDVEQQAEARGDAEYPCSICREPFGVHAKVLLSCSHMFHHTCLTSFERFLRTTDRV--CPLCRKQNYEKKATQSGEAHFRSICARRLQARIRGWLARRRYTSLLAHYYKQGYGDPRRRSLFYASKVSAISSRIVRAMKARADSIDALLAEFDESMSRSRAIFNGEN-----------------------------------NQETAKGNAWPNALAKATARNEAECPICLNAM----SAKAVTLLSCSHVLHAECLVAFESF 349
BLAST of mRNA_P-wetherbeei_contig1690.4.2 vs. uniprot
Match: A0A7S1CAV5_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CAV5_9STRA) HSP 1 Score: 180 bits (456), Expect = 8.840e-51 Identity = 125/335 (37.31%), Postives = 154/335 (45.97%), Query Frame = 1
Query: 13 LTLAQTRGLEPQPAPALTGADWVAVEQEAARCGRGK--------------------SPCAICRESFKCSRQALLSCGHIFHAACLSSFERFTRTRNEAERCPLCRNSGYQKCTTMLGTQAWRQACAIKVQAWIRGRLARRQLRRLFRARYRGGRGDSECRRRFFASELGECASRMEKDVGIRAESLDMLFAELDAGLAFSREVFNTQRAAPACDHG------------IEACTPSSCRISGWQAAEASPASGIREDGKAAELEAWAVAFARARERDTLECPICMNDMCSLFAPRPVLLLSCSHVMHLACLHSFEDFGGGAGGVSPGCPVCRSTYK 921
+TLAQ GL P PAP +T W QE AR + CAIC E + LLSC HIFH ACL SFERF+R R CP+CR + Y+K T +G + ACA +QA RG R RA Y G+GD RRRFFA + E ++R+E + ++LD LFA+LDA + SRE F A A H SG A AS + + E WA A A A ER ECPIC+ D PR +LLSCSHV H C+ +FE F +P CPVCR Y+
Sbjct: 9 MTLAQRLGLVPAPAPEMTTQQW----QEVARASEARLAAAXXXXXXXXXXXXXXXGGSCAICLERLGMAEALLLSCSHIFHKACLESFERFSRARERT--CPMCRAANYEKRPTRVGAKRHVHACATVLQARWRGHRTRVAFAEQRRAYYAAGKGDPARRRRFFAERMSEVSTRLEDALADEDDALDALFAQLDADVEASREAFRAHGRAVAHHHDRHRDAADXXXXXXXXXXXXXXXXSGDVAPHPGHASSLDRLVPSVSAEQWAAAEAAAVERAVTECPICIADFS--LKPRSTVLLSCSHVFHATCIAAFESFSPYD---APACPVCRQHYR 332
BLAST of mRNA_P-wetherbeei_contig1690.4.2 vs. uniprot
Match: A0A067C9I3_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067C9I3_SAPPC) HSP 1 Score: 170 bits (430), Expect = 2.660e-46 Identity = 116/320 (36.25%), Postives = 154/320 (48.12%), Query Frame = 1
Query: 13 LTLAQTRGLEPQPAPALTGADWVAVEQEAARCGRGKSPCAICRESFKCSRQALLSCGHIFHAACLSSFERFTRTRNEAERCPLCRNSGYQKCTTMLGTQAWRQACAI----------------KVQAWIRGRLARRQLRRLFRARYRGGRGDSECRRRFFASELGECASRMEKDVGIRAESLDMLFAELDAGLAFSREVFNTQRAAPACDHGIEACTPSSCRISGWQAAEASPASGIREDGKAAELEAWAVAFARARERDTLECPICMNDMCSLFAPRPVLLLSCSHVMHLACLHSFEDFGGGAGGVSPGCPVCRSTYKS 924
LTLAQ +GL P P P L W VEQ+A G PC+ICRE F S + LLSC H+FH ACL+SFERF RT + CPLCR Y+K ++ + + QA IRG LARR+ L Y+ G GD R F+AS++ +SR+ + + RA+S+D L AE D ++ SR +F+ + + GK A W A A+A R+ ECPIC+N M + + V LLSCSHV+H CL +FE F + CPVCR Y+S
Sbjct: 106 LTLAQKKGLMPGPPPRLNNNQWEDVEQQAEARGDAVYPCSICREPFGVSPKVLLSCSHVFHQACLTSFERFLRTTDRV--CPLCRKQNYEKKPHEPANRSIAASARVGFRCDDASPKTLSHLCDAQARIRGWLARRRYPSLLAHYYKQGNGDPRRRSLFYASKVSAISSRIVRAMKARADSIDALLAEFDESMSRSRAIFSGETNQETAN------------------------------GKVASQ--WTTALAKATARNEAECPICLNAM----SAKAVTLLSCSHVLHAECLVAFESFNIYEVHL---CPVCRGHYES 384
BLAST of mRNA_P-wetherbeei_contig1690.4.2 vs. uniprot
Match: D8LIS5_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIS5_ECTSI) HSP 1 Score: 167 bits (423), Expect = 9.680e-44 Identity = 106/266 (39.85%), Postives = 132/266 (49.62%), Query Frame = 1
Query: 1 RTLALTLAQTRGLEPQPAPALTGADWVAVEQEAARCGRGKSPCAICRESFKCSRQALLSCGHIFHAACLSSFERFTRTRNEAERCPLCRNSGYQKCTTMLGTQAWRQACAIKVQAWIRGRLARRQLRRLFRARYRGGRGDSECRRRFFASELGECASRMEKDVGIRAESLDMLFAELDAGLAFSREVFNTQR-------AAPACDHGIEACTPSSCRISGWQAAEASPASGIREDGKAAELEAWAVAFARARERDTLECPICMNDM 777
R +A+TLAQ RGLE P P LT +W AVE +A G +PC ICRESF+ Q +LSC H+FH ACLSSFE+F R + + CPLCR YQK T G AWRQ CA ++Q R ARRQ R L R Y G GD+ RR F + + E A ++ + R +++D LF E D LAFSR+VF A A K + W A+ +A ER ECPICM M
Sbjct: 179 RRVAVTLAQIRGLEEPPEPTLTPGEWRAVEAKALARGDEAAPCPICRESFRGESQVILSCSHVFHKACLSSFEKFLRAQERS--CPLCRKVDYQKKATRQGAVAWRQRCARRLQCAYRRHRARRQYRGLLRRHYGAGLGDTLRRREFLSGQAAETAGKLAAALEDRGDTIDRLFGEFDRSLAFSRQVFGPASTSTDPLTATTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTPSKERRVVVWKEAWVKAGERAEDECPICMCPM 442
BLAST of mRNA_P-wetherbeei_contig1690.4.2 vs. uniprot
Match: A0A5N5PJ33_PANHP (Uncharacterized protein n=1 Tax=Pangasianodon hypophthalmus TaxID=310915 RepID=A0A5N5PJ33_PANHP) HSP 1 Score: 156 bits (395), Expect = 1.090e-41 Identity = 105/310 (33.87%), Postives = 144/310 (46.45%), Query Frame = 1
Query: 13 LTLAQTRGLEPQPAPA-LTGADWVAVEQEAARCGRGKSPCAICRESFKCSRQALLSCGHIFHAACLSSFERFTRTRNEAERCPLCRNSGYQKCTTMLGTQAWRQACAIKVQAWIRGRLARRQLRRLFRARYRGGR-----GDSECRRRFFASELGECASRMEKDVGIRAESLDMLFAELDAGLAFSREVFNTQRAAPACDHGIEACTPSSCRISGWQAAEASPASGIREDGKAAELEAWAVAFARARERDTLECPICMNDMCSLFAPRPVLLLSCSHVMHLACLHSFEDFGGGAGGVSPGCPVCRSTYKS 924
LTLAQ GL P+ LT W V+ + G PC IC E F+ Q LLSC H+FH ACL FERF+ + CPLCR Y+ G + +R+ CA+++QAW RG +AR+ YRG R D + RRRFF + E + + + +D E+D +A SR+VF+ + G+E E W A +A +RDT +CPIC+ + S + PV+LLSCSH+ H +CL + EDF G CP+CR Y S
Sbjct: 70 LTLAQKLGLVAAPSSRRLTVDQWTEVKSRSLLNGDSTQPCIICTEEFRLQPQVLLSCSHVFHKACLRKFERFSGRKC----CPLCRTEQYETRVIHDGARLYREKCALRIQAWWRGCVARKW--------YRGVRKVVPPNDPQLRRRFFEEKFQEMNESLVQSC---SSDVDSFLREIDRSVAQSRDVFHLFDRLQSSARGVEE-------------------------------EVWMKAQEKAVQRDTRDCPICLTPLRSAHSSAPVVLLSCSHLFHQSCLRASEDFHQEGGAT---CPLCRCHYVS 330
BLAST of mRNA_P-wetherbeei_contig1690.4.2 vs. uniprot
Match: F6VS48_XENTR (RING finger protein 32 n=1 Tax=Xenopus tropicalis TaxID=8364 RepID=F6VS48_XENTR) HSP 1 Score: 155 bits (391), Expect = 1.030e-40 Identity = 107/313 (34.19%), Postives = 152/313 (48.56%), Query Frame = 1
Query: 13 LTLAQTRGLEPQPAPALTGADWVAVEQEAARCGRGKSPCAICRESFKCSRQALLSCGHIFHAACLSSFERFTRTRNEAERCPLCRNSGYQKCTTMLGTQAWRQACAIKVQAWIRGRLARR---QLRRLFRARYRGGRGDSECRRRFFASELGECASRMEKDVGIRAESLDMLFAELDAGLAFSREVFNTQRAAPACDHGIEACTPSSCRISGWQAAEASPASGIREDGKAAELEAWAVAFARARERDTLECPICMNDMCSLFAP-------RPVLLLSCSHVMHLACLHSFEDFGGGAGGVSPGCPVCRSTYK 921
LTLAQ G+ PA LT +W+ V+Q + G PC IC+E F Q LLSC H+FH ACL +FERFT + CP+CR + YQ G + ++ CA ++QA RG + R+ QLR+ + + + RR+FF + E R+ + + ++++ F E+D LA SR+V E S AS I E E W +A ++ +CPIC+ +C RPV+LLSCSHV H ACLH+FE+F G + CP+CRSTY+
Sbjct: 113 LTLAQKLGIVGAPALPLTHEEWIKVKQRSVDQGDSLQPCVICKEEFGIHPQVLLSCSHVFHRACLEAFERFTGRKT----CPMCRRNQYQTRVIYDGARLYKAKCATRIQACWRGYIVRKWYKQLRQTIPPK------NPKLRRKFFEEKFTEVTDRLLRSF---STNIEVFFNEIDHSLANSRKVLRQL--------------------------EGSRASQISE-------EEWERIQMKAARQEISDCPICIMPLCYSSDTQRNGQLLRPVVLLSCSHVFHQACLHAFEEFTVGEPYI---CPLCRSTYQ 376 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1690.4.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1690.4.2 >prot_P-wetherbeei_contig1690.4.2 ID=prot_P-wetherbeei_contig1690.4.2|Name=mRNA_P-wetherbeei_contig1690.4.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=310bp RTLALTLAQTRGLEPQPAPALTGADWVAVEQEAARCGRGKSPCAICRESFback to top mRNA from alignment at P-wetherbeei_contig1690:4021..5249- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1690.4.2 ID=mRNA_P-wetherbeei_contig1690.4.2|Name=mRNA_P-wetherbeei_contig1690.4.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1229bp|location=Sequence derived from alignment at P-wetherbeei_contig1690:4021..5249- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1690:4021..5249- >mRNA_P-wetherbeei_contig1690.4.2 ID=mRNA_P-wetherbeei_contig1690.4.2|Name=mRNA_P-wetherbeei_contig1690.4.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=930bp|location=Sequence derived from alignment at P-wetherbeei_contig1690:4021..5249- (Phaeothamnion wetherbeei SAG_119_79)back to top |