mRNA_P-wetherbeei_contig1690.4.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1690.4.2
Unique NamemRNA_P-wetherbeei_contig1690.4.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1690.4.2 vs. uniprot
Match: A0A6A3MY24_9STRA (Uncharacterized protein n=6 Tax=Phytophthora TaxID=4783 RepID=A0A6A3MY24_9STRA)

HSP 1 Score: 199 bits (506), Expect = 2.270e-57
Identity = 126/306 (41.18%), Postives = 163/306 (53.27%), Query Frame = 1
Query:   13 LTLAQTRGLEPQPAPALTGADWVAVEQEAARCGRGKSPCAICRESFKCSRQALLSCGHIFHAACLSSFERFTRTRNEAERCPLCRNSGYQKCTTMLGTQAWRQACAIKVQAWIRGRLARRQLRRLFRARYRGGRGDSECRRRFFASELGECASRMEKDVGIRAESLDMLFAELDAGLAFSREVFNTQRAAPACDHGIEACTPSSCRISGWQAAEASPASGIREDGKAAELEAWAVAFARARERDTLECPICMNDMCSLFAPRPVLLLSCSHVMHLACLHSFEDFGGGAGGVSPGCPVCRSTYKSTT 930
            LTLAQ RGL  +P P LT  +W   EQ+A   G  + PC+ICRESF    Q +LSC H+FH AC++SFERF RT      CPLCR   YQK  T + +   R   A ++QA +RG LARRQ   L++  Y  G+GD   RRRFFA+ +G+   R+   +  R +S+D L AE D  L+ SR VF         D+  E               E  PA+G    G     + W   F +A+ R+  EC IC+N   S  A   V LLSCSH  H  CL +FEDF      +   CPVCR++Y+S T
Sbjct:  128 LTLAQKRGLVKRPPPKLTRDEWEDCEQQAEARGDTQHPCSICRESFGVKEQVILSCSHMFHLACITSFERFLRTNQRV--CPLCRKQNYQKRNTTMASAFHRDYSAKRIQAVLRGFLARRQAAGLWQKFYSSGKGDPIRRRRFFANRVGKTTDRLVTAMSKRDDSIDALLAEFDKSLSMSRRVFQ--------DNAPET--------------ETDPATGASFPGG----DDWLAIFNKAKARNESECAICINSFGSSMAG--VSLLSCSHAFHSQCLSAFEDFNIYEVSL---CPVCRASYRSQT 400          
BLAST of mRNA_P-wetherbeei_contig1690.4.2 vs. uniprot
Match: A0A329SK16_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A329SK16_9STRA)

HSP 1 Score: 192 bits (489), Expect = 4.620e-55
Identity = 124/306 (40.52%), Postives = 157/306 (51.31%), Query Frame = 1
Query:   13 LTLAQTRGLEPQPAPALTGADWVAVEQEAARCGRGKSPCAICRESFKCSRQALLSCGHIFHAACLSSFERFTRTRNEAERCPLCRNSGYQKCTTMLGTQAWRQACAIKVQAWIRGRLARRQLRRLFRARYRGGRGDSECRRRFFASELGECASRMEKDVGIRAESLDMLFAELDAGLAFSREVFNTQRAAPACDHGIEACTPSSCRISGWQAAEASPASGIREDGKAAELEAWAVAFARARERDTLECPICMNDMCSLFAPRPVLLLSCSHVMHLACLHSFEDFGGGAGGVSPGCPVCRSTYKSTT 930
            LTLAQ RGL  +P P LT  +W   EQ+A   G  K PC+ICRE F    Q +LSC H+FH  C++SFERF RT      CPLCR   YQK  T + +   R+  A ++QA  RG   RRQ   L++  Y  G+GD   RRRFFA+ +G+   R+   +  R +S+D L AE D  L+ SR VF  Q   P  D                      PA+GI   G     + W   F +AR RD  EC IC+N   S  + + V LLSCSH  H  CL +FE F      +   CPVCR+ Y S T
Sbjct:  112 LTLAQKRGLVSRPRPKLTRDEWEHCEQQAQARGDTKDPCSICREPFGVKEQVILSCSHMFHLDCITSFERFLRTNQHV--CPLCRKQDYQKRCTTVASAFHREHSANRIQAVFRGFATRRQAATLWQKFYSSGKGDPTRRRRFFANRVGKTTDRLVTAMSKRDDSIDALLAEFDKSLSMSRRVF--QGHVPETD--------------------TDPATGIPFPGG----DDWLAIFTKARARDERECAICINPFSS--SMKGVSLLSCSHAFHSQCLSAFEHFNIYEVSL---CPVCRAGYHSQT 384          
BLAST of mRNA_P-wetherbeei_contig1690.4.2 vs. uniprot
Match: A0A1V9Y8L0_9STRA (RING finger protein 32-like n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y8L0_9STRA)

HSP 1 Score: 185 bits (469), Expect = 1.090e-52
Identity = 117/307 (38.11%), Postives = 158/307 (51.47%), Query Frame = 1
Query:    1 RTLALTLAQTRGLEPQPAPALTGADWVAVEQEAARCGRGKSPCAICRESFKCSRQALLSCGHIFHAACLSSFERFTRTRNEAERCPLCRNSGYQKCTTMLGTQAWRQACAIKVQAWIRGRLARRQLRRLFRARYRGGRGDSECRRRFFASELGECASRMEKDVGIRAESLDMLFAELDAGLAFSREVFNTQRAAPACDHGIEACTPSSCRISGWQAAEASPASGIREDGKAAELEAWAVAFARARERDTLECPICMNDMCSLFAPRPVLLLSCSHVMHLACLHSFEDFGGGAGGVSPGCPVCRSTYK 921
            R L LTLAQ +GL   P P L+   W   E +A   G    PC+ICRE F    + +LSC H+FH  CL+SFERF RT   A  CPLCR   YQK  T  G   +++ACAIK+QA++RG L R+    L    Y+ G GD + R  F+AS++   +SR+ + +  RA+S+D L A+ D  +  SR VFN   A                                  D K    + WA A  +A  R+  ECPIC+N + S    +P++LL+CSHV H  CL++FE F      +   CPVCR  Y+
Sbjct:   60 RRLKLTLAQKKGLVACPEPKLSINQWEECEFQAEERGDPAYPCSICREPFGVLPKVILSCSHMFHHNCLTSFERFLRTN--ARVCPLCRKQNYQKKLTKRGELHYKKACAIKMQAFVRGFLTRQHYPELLNQYYKQGYGDPKRRALFYASKISSISSRIVRAMDSRADSIDALLAQFDQTVILSRSVFNPTEAI---------------------------------DTKCQTSDKWASALLKATTREENECPICINAIDS----KPMMLLNCSHVFHTDCLNAFESFNIYEVHL---CPVCRCNYE 324          
BLAST of mRNA_P-wetherbeei_contig1690.4.2 vs. uniprot
Match: A0A8K1C7G8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C7G8_PYTOL)

HSP 1 Score: 184 bits (466), Expect = 6.730e-52
Identity = 117/295 (39.66%), Postives = 149/295 (50.51%), Query Frame = 1
Query:   49 PAPALTGADWVAVEQEAARCGRGKSPCAICRESFKCSRQALLSCGHIFHAACLSSFERFTRTRNEAERCPLCRNSGYQKCTTMLGTQAWRQACAIKVQAWIRGRLARRQLRRLFRARYRGGRGDSECRRRFFASELGECASRMEKDVGIRAESLDMLFAELDAGLAFSREVFNTQRAAPACDHGIEACTPSSCRISGWQAAEASPASGIREDGKAAELEAWAVAFARARERDTLECPICMN----DMCSLFAPRPVLLLSCSHVMHLACLHSFEDFGGGAGGVSPGCPVCRSTYK 921
            P P L+  DW   E +A   G    PC+ICRESF    Q +LSC H+FH AC+ SFERF RT+     CPLCR   YQK  T+ G    R  CA+++Q   RG   RR+L  L+   YR G+GD   RRRF A+ +G+   R+   +  R +S+D L AE D  L+ SR+VF+  +  P  D       PS     G                       W   F +AR RD  ECPIC+N    DM +      V LLSCSH  H  CLH+FEDF        P CPVCR++Y+
Sbjct:  101 PPPKLSRDDWERCENQALERGDVNHPCSICRESFGVQEQVILSCSHMFHLACIQSFERFLRTKQRV--CPLCRKDNYQKRATVKGAVIHRDKCALRIQTMFRGFRERRRLDSLWHQFYRQGKGDPVRRRRFLANRIGKTTDRLVGAMRARDDSIDALLAEFDKTLSLSRQVFDPSQ--PQTDDD-----PSFPTRRGVD---------------------WLAVFEKARLRDERECPICINAFSVDMTN------VTLLSCSHCFHHDCLHAFEDFNIYE---VPLCPVCRASYQ 356          
BLAST of mRNA_P-wetherbeei_contig1690.4.2 vs. uniprot
Match: T0QW99_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QW99_SAPDV)

HSP 1 Score: 184 bits (466), Expect = 8.410e-52
Identity = 112/284 (39.44%), Postives = 149/284 (52.46%), Query Frame = 1
Query:   13 LTLAQTRGLEPQPAPALTGADWVAVEQEAARCGRGKSPCAICRESFKCSRQALLSCGHIFHAACLSSFERFTRTRNEAERCPLCRNSGYQKCTTMLGTQAWRQACAIKVQAWIRGRLARRQLRRLFRARYRGGRGDSECRRRFFASELGECASRMEKDVGIRAESLDMLFAELDAGLAFSREVFNTQRAAPACDHGIEACTPSSCRISGWQAAEASPASGIREDGKAAELEAWAVAFARARERDTLECPICMNDMCSLFAPRPVLLLSCSHVMHLACLHSFEDF 864
            LTLAQ +GL P P P L    W  VEQ+A   G  + PC+ICRE F    + LLSC H+FH  CL+SFERF RT +    CPLCR   Y+K  T  G   +R  CA ++QA IRG LARR+   L    Y+ G GD   R  F+AS++   +SR+ + +  RA+S+D L AE D  ++ SR +FN +                                    + + A+  AW  A A+A  R+  ECPIC+N M    + + V LLSCSHV+H  CL +FE F
Sbjct:  107 LTLAQKKGLVPGPPPRLNNNQWEDVEQQAEARGDAEYPCSICREPFGVHAKVLLSCSHMFHHTCLTSFERFLRTTDRV--CPLCRKQNYEKKATQSGEAHFRSICARRLQARIRGWLARRRYTSLLAHYYKQGYGDPRRRSLFYASKVSAISSRIVRAMKARADSIDALLAEFDESMSRSRAIFNGEN-----------------------------------NQETAKGNAWPNALAKATARNEAECPICLNAM----SAKAVTLLSCSHVLHAECLVAFESF 349          
BLAST of mRNA_P-wetherbeei_contig1690.4.2 vs. uniprot
Match: A0A7S1CAV5_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CAV5_9STRA)

HSP 1 Score: 180 bits (456), Expect = 8.840e-51
Identity = 125/335 (37.31%), Postives = 154/335 (45.97%), Query Frame = 1
Query:   13 LTLAQTRGLEPQPAPALTGADWVAVEQEAARCGRGK--------------------SPCAICRESFKCSRQALLSCGHIFHAACLSSFERFTRTRNEAERCPLCRNSGYQKCTTMLGTQAWRQACAIKVQAWIRGRLARRQLRRLFRARYRGGRGDSECRRRFFASELGECASRMEKDVGIRAESLDMLFAELDAGLAFSREVFNTQRAAPACDHG------------IEACTPSSCRISGWQAAEASPASGIREDGKAAELEAWAVAFARARERDTLECPICMNDMCSLFAPRPVLLLSCSHVMHLACLHSFEDFGGGAGGVSPGCPVCRSTYK 921
            +TLAQ  GL P PAP +T   W    QE AR    +                      CAIC E    +   LLSC HIFH ACL SFERF+R R     CP+CR + Y+K  T +G +    ACA  +QA  RG   R       RA Y  G+GD   RRRFFA  + E ++R+E  +    ++LD LFA+LDA +  SRE F     A A  H                        SG  A     AS +     +   E WA A A A ER   ECPIC+ D      PR  +LLSCSHV H  C+ +FE F       +P CPVCR  Y+
Sbjct:    9 MTLAQRLGLVPAPAPEMTTQQW----QEVARASEARLAAAXXXXXXXXXXXXXXXGGSCAICLERLGMAEALLLSCSHIFHKACLESFERFSRARERT--CPMCRAANYEKRPTRVGAKRHVHACATVLQARWRGHRTRVAFAEQRRAYYAAGKGDPARRRRFFAERMSEVSTRLEDALADEDDALDALFAQLDADVEASREAFRAHGRAVAHHHDRHRDAADXXXXXXXXXXXXXXXXSGDVAPHPGHASSLDRLVPSVSAEQWAAAEAAAVERAVTECPICIADFS--LKPRSTVLLSCSHVFHATCIAAFESFSPYD---APACPVCRQHYR 332          
BLAST of mRNA_P-wetherbeei_contig1690.4.2 vs. uniprot
Match: A0A067C9I3_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067C9I3_SAPPC)

HSP 1 Score: 170 bits (430), Expect = 2.660e-46
Identity = 116/320 (36.25%), Postives = 154/320 (48.12%), Query Frame = 1
Query:   13 LTLAQTRGLEPQPAPALTGADWVAVEQEAARCGRGKSPCAICRESFKCSRQALLSCGHIFHAACLSSFERFTRTRNEAERCPLCRNSGYQKCTTMLGTQAWRQACAI----------------KVQAWIRGRLARRQLRRLFRARYRGGRGDSECRRRFFASELGECASRMEKDVGIRAESLDMLFAELDAGLAFSREVFNTQRAAPACDHGIEACTPSSCRISGWQAAEASPASGIREDGKAAELEAWAVAFARARERDTLECPICMNDMCSLFAPRPVLLLSCSHVMHLACLHSFEDFGGGAGGVSPGCPVCRSTYKS 924
            LTLAQ +GL P P P L    W  VEQ+A   G    PC+ICRE F  S + LLSC H+FH ACL+SFERF RT +    CPLCR   Y+K       ++   +  +                  QA IRG LARR+   L    Y+ G GD   R  F+AS++   +SR+ + +  RA+S+D L AE D  ++ SR +F+ +      +                              GK A    W  A A+A  R+  ECPIC+N M    + + V LLSCSHV+H  CL +FE F      +   CPVCR  Y+S
Sbjct:  106 LTLAQKKGLMPGPPPRLNNNQWEDVEQQAEARGDAVYPCSICREPFGVSPKVLLSCSHVFHQACLTSFERFLRTTDRV--CPLCRKQNYEKKPHEPANRSIAASARVGFRCDDASPKTLSHLCDAQARIRGWLARRRYPSLLAHYYKQGNGDPRRRSLFYASKVSAISSRIVRAMKARADSIDALLAEFDESMSRSRAIFSGETNQETAN------------------------------GKVASQ--WTTALAKATARNEAECPICLNAM----SAKAVTLLSCSHVLHAECLVAFESFNIYEVHL---CPVCRGHYES 384          
BLAST of mRNA_P-wetherbeei_contig1690.4.2 vs. uniprot
Match: D8LIS5_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIS5_ECTSI)

HSP 1 Score: 167 bits (423), Expect = 9.680e-44
Identity = 106/266 (39.85%), Postives = 132/266 (49.62%), Query Frame = 1
Query:    1 RTLALTLAQTRGLEPQPAPALTGADWVAVEQEAARCGRGKSPCAICRESFKCSRQALLSCGHIFHAACLSSFERFTRTRNEAERCPLCRNSGYQKCTTMLGTQAWRQACAIKVQAWIRGRLARRQLRRLFRARYRGGRGDSECRRRFFASELGECASRMEKDVGIRAESLDMLFAELDAGLAFSREVFNTQR-------AAPACDHGIEACTPSSCRISGWQAAEASPASGIREDGKAAELEAWAVAFARARERDTLECPICMNDM 777
            R +A+TLAQ RGLE  P P LT  +W AVE +A   G   +PC ICRESF+   Q +LSC H+FH ACLSSFE+F R +  +  CPLCR   YQK  T  G  AWRQ CA ++Q   R   ARRQ R L R  Y  G GD+  RR F + +  E A ++   +  R +++D LF E D  LAFSR+VF           A  A                                 K   +  W  A+ +A ER   ECPICM  M
Sbjct:  179 RRVAVTLAQIRGLEEPPEPTLTPGEWRAVEAKALARGDEAAPCPICRESFRGESQVILSCSHVFHKACLSSFEKFLRAQERS--CPLCRKVDYQKKATRQGAVAWRQRCARRLQCAYRRHRARRQYRGLLRRHYGAGLGDTLRRREFLSGQAAETAGKLAAALEDRGDTIDRLFGEFDRSLAFSRQVFGPASTSTDPLTATTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTPSKERRVVVWKEAWVKAGERAEDECPICMCPM 442          
BLAST of mRNA_P-wetherbeei_contig1690.4.2 vs. uniprot
Match: A0A5N5PJ33_PANHP (Uncharacterized protein n=1 Tax=Pangasianodon hypophthalmus TaxID=310915 RepID=A0A5N5PJ33_PANHP)

HSP 1 Score: 156 bits (395), Expect = 1.090e-41
Identity = 105/310 (33.87%), Postives = 144/310 (46.45%), Query Frame = 1
Query:   13 LTLAQTRGLEPQPAPA-LTGADWVAVEQEAARCGRGKSPCAICRESFKCSRQALLSCGHIFHAACLSSFERFTRTRNEAERCPLCRNSGYQKCTTMLGTQAWRQACAIKVQAWIRGRLARRQLRRLFRARYRGGR-----GDSECRRRFFASELGECASRMEKDVGIRAESLDMLFAELDAGLAFSREVFNTQRAAPACDHGIEACTPSSCRISGWQAAEASPASGIREDGKAAELEAWAVAFARARERDTLECPICMNDMCSLFAPRPVLLLSCSHVMHLACLHSFEDFGGGAGGVSPGCPVCRSTYKS 924
            LTLAQ  GL   P+   LT   W  V+  +   G    PC IC E F+   Q LLSC H+FH ACL  FERF+  +     CPLCR   Y+      G + +R+ CA+++QAW RG +AR+         YRG R      D + RRRFF  +  E    + +     +  +D    E+D  +A SR+VF+      +   G+E                                E W  A  +A +RDT +CPIC+  + S  +  PV+LLSCSH+ H +CL + EDF    G     CP+CR  Y S
Sbjct:   70 LTLAQKLGLVAAPSSRRLTVDQWTEVKSRSLLNGDSTQPCIICTEEFRLQPQVLLSCSHVFHKACLRKFERFSGRKC----CPLCRTEQYETRVIHDGARLYREKCALRIQAWWRGCVARKW--------YRGVRKVVPPNDPQLRRRFFEEKFQEMNESLVQSC---SSDVDSFLREIDRSVAQSRDVFHLFDRLQSSARGVEE-------------------------------EVWMKAQEKAVQRDTRDCPICLTPLRSAHSSAPVVLLSCSHLFHQSCLRASEDFHQEGGAT---CPLCRCHYVS 330          
BLAST of mRNA_P-wetherbeei_contig1690.4.2 vs. uniprot
Match: F6VS48_XENTR (RING finger protein 32 n=1 Tax=Xenopus tropicalis TaxID=8364 RepID=F6VS48_XENTR)

HSP 1 Score: 155 bits (391), Expect = 1.030e-40
Identity = 107/313 (34.19%), Postives = 152/313 (48.56%), Query Frame = 1
Query:   13 LTLAQTRGLEPQPAPALTGADWVAVEQEAARCGRGKSPCAICRESFKCSRQALLSCGHIFHAACLSSFERFTRTRNEAERCPLCRNSGYQKCTTMLGTQAWRQACAIKVQAWIRGRLARR---QLRRLFRARYRGGRGDSECRRRFFASELGECASRMEKDVGIRAESLDMLFAELDAGLAFSREVFNTQRAAPACDHGIEACTPSSCRISGWQAAEASPASGIREDGKAAELEAWAVAFARARERDTLECPICMNDMCSLFAP-------RPVLLLSCSHVMHLACLHSFEDFGGGAGGVSPGCPVCRSTYK 921
            LTLAQ  G+   PA  LT  +W+ V+Q +   G    PC IC+E F    Q LLSC H+FH ACL +FERFT  +     CP+CR + YQ      G + ++  CA ++QA  RG + R+   QLR+    +      + + RR+FF  +  E   R+ +     + ++++ F E+D  LA SR+V                              E S AS I E       E W     +A  ++  +CPIC+  +C            RPV+LLSCSHV H ACLH+FE+F  G   +   CP+CRSTY+
Sbjct:  113 LTLAQKLGIVGAPALPLTHEEWIKVKQRSVDQGDSLQPCVICKEEFGIHPQVLLSCSHVFHRACLEAFERFTGRKT----CPMCRRNQYQTRVIYDGARLYKAKCATRIQACWRGYIVRKWYKQLRQTIPPK------NPKLRRKFFEEKFTEVTDRLLRSF---STNIEVFFNEIDHSLANSRKVLRQL--------------------------EGSRASQISE-------EEWERIQMKAARQEISDCPICIMPLCYSSDTQRNGQLLRPVVLLSCSHVFHQACLHAFEEFTVGEPYI---CPLCRSTYQ 376          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1690.4.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6A3MY24_9STRA2.270e-5741.18Uncharacterized protein n=6 Tax=Phytophthora TaxID... [more]
A0A329SK16_9STRA4.620e-5540.52Uncharacterized protein n=3 Tax=Phytophthora TaxID... [more]
A0A1V9Y8L0_9STRA1.090e-5238.11RING finger protein 32-like n=1 Tax=Thraustotheca ... [more]
A0A8K1C7G8_PYTOL6.730e-5239.66Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
T0QW99_SAPDV8.410e-5239.44Uncharacterized protein n=2 Tax=Saprolegnia diclin... [more]
A0A7S1CAV5_9STRA8.840e-5137.31Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A067C9I3_SAPPC2.660e-4636.25Uncharacterized protein n=2 Tax=Saprolegnia parasi... [more]
D8LIS5_ECTSI9.680e-4439.85RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A5N5PJ33_PANHP1.090e-4133.87Uncharacterized protein n=1 Tax=Pangasianodon hypo... [more]
F6VS48_XENTR1.030e-4034.19RING finger protein 32 n=1 Tax=Xenopus tropicalis ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1690contigP-wetherbeei_contig1690:4021..5249 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog112098.XP_008603892.1
Preferred nameRNF32
PFAMsIQ,zf-RING_2,zf-RING_UBOX
Model size930
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0012505,GO:0016234,GO:0016235,GO:0031410,GO:0031982,GO:0043226,GO:0043227,GO:0043229,GO:0044424,GO:0044444,GO:0044464,GO:0097708
Exons3
Evalue2.09e-55
EggNOG OGsKOG0800@1|root,KOG0800@2759|Eukaryota
Descriptionubiquitin-protein transferase activity
Cds size930
COG categoryO
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186101.4985597-CDS-P-wetherbeei_contig1690:4020..41611683186101.4985597-CDS-P-wetherbeei_contig1690:4020..4161Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1690 4021..4161 -
1683186101.5157611-CDS-P-wetherbeei_contig1690:4221..45271683186101.5157611-CDS-P-wetherbeei_contig1690:4221..4527Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1690 4222..4527 -
1683186101.5245547-CDS-P-wetherbeei_contig1690:4766..52491683186101.5245547-CDS-P-wetherbeei_contig1690:4766..5249Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1690 4767..5249 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1690.4.2prot_P-wetherbeei_contig1690.4.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1690 4021..5249 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1690.4.2

>prot_P-wetherbeei_contig1690.4.2 ID=prot_P-wetherbeei_contig1690.4.2|Name=mRNA_P-wetherbeei_contig1690.4.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=310bp
RTLALTLAQTRGLEPQPAPALTGADWVAVEQEAARCGRGKSPCAICRESF
KCSRQALLSCGHIFHAACLSSFERFTRTRNEAERCPLCRNSGYQKCTTML
GTQAWRQACAIKVQAWIRGRLARRQLRRLFRARYRGGRGDSECRRRFFAS
ELGECASRMEKDVGIRAESLDMLFAELDAGLAFSREVFNTQRAAPACDHG
IEACTPSSCRISGWQAAEASPASGIREDGKAAELEAWAVAFARARERDTL
ECPICMNDMCSLFAPRPVLLLSCSHVMHLACLHSFEDFGGGAGGVSPGCP
VCRSTYKSTT
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mRNA from alignment at P-wetherbeei_contig1690:4021..5249-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1690.4.2 ID=mRNA_P-wetherbeei_contig1690.4.2|Name=mRNA_P-wetherbeei_contig1690.4.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1229bp|location=Sequence derived from alignment at P-wetherbeei_contig1690:4021..5249- (Phaeothamnion wetherbeei SAG_119_79)
AGAACGCTCGCGCTCACCTTGGCTCAAACGAGAGGCTTGGAGCCCCAGCC AGCGCCCGCCCTCACGGGTGCAGATTGGGTGGCCGTTGAACAGGAAGCTG CCCGCTGCGGTCGCGGCAAGAGTCCCTGCGCCATTTGCCGCGAGAGTTTT AAGTGCTCCCGGCAAGCACTGCTAAGTTGCGGTCACATTTTTCATGCTGC TTGCCTTTCCAGCTTTGAGCGGTTTACCCGGACACGCAACGAGGCTGAAA GATGTCCCTTGTGTCGGAACAGCGGCTACCAGAAATGCACAACAATGCTG GGGACTCAGGCGTGGCGACAGGCCTGTGCTATCAAAGTGCAAGCTTGGAT TCGAGGCCGGCTGGCCCGACGACAGCTGCGACGCCTCTTCCGTGCTAGGT ACCGTGGAGGCCGCGGCGATTCGGAGTGCCGGCGACGCTTCTTTGCTTCG GAGCTCGGCGAGTGTGCGAGCCGCATGGAAAAGGTGCGGAGCAGTGGCTC TGTCCTATAAAAAATGGGTTTCTTGCCTGTCGTTCTTCCCATTTTTCTTC TTCGCATGTCCATTTCTTCATCTCAAACCTGAGTGTATCCAGCACTTTTC CAAGAGGGATAATATCGTGGCGGCAGTGTCTGATGTGTAAGGGTCTCTTG CTTGCCCCATCAATGCGTGCGCCAAATGCCTCACAGCTTCTTGTCCATTT TGCTGACTCAATTCCTCCTCAGGACGTGGGAATACGTGCCGAGTCGCTAG ATATGCTTTTTGCAGAGCTCGATGCCGGCCTCGCCTTCTCCAGAGAAGTC TTCAACACCCAGCGCGCTGCGCCCGCCTGCGACCACGGAATTGAGGCTTG CACCCCCAGCAGCTGCAGGATTAGCGGTTGGCAAGCGGCAGAGGCATCTC CAGCCAGCGGGATCAGAGAGGACGGCAAAGCTGCGGAGCTGGAGGCGTGG GCCGTCGCGTTCGCGCGAGCGCGGGAGCGCGACACGCTCGAGTGTCCAAT TTGCATGAACGACATGTGCTCTCTCTTCGTCCATAGCACCGATGCCCCGC TTCGGATAACAACGGGAAAAGGCCGTGGAAAGCAGGAGGCGCCGCGACCG GTGCTGTTGCTGTCGTGTTCCCACGTGATGCACCTGGCGTGCCTGCATTC GTTCGAAGATTTTGGCGGCGGCGCGGGCGGCGTATCGCCCGGCTGCCCGG TCTGCCGATCCACATACAAAAGCACAACG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1690:4021..5249-

>mRNA_P-wetherbeei_contig1690.4.2 ID=mRNA_P-wetherbeei_contig1690.4.2|Name=mRNA_P-wetherbeei_contig1690.4.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=930bp|location=Sequence derived from alignment at P-wetherbeei_contig1690:4021..5249- (Phaeothamnion wetherbeei SAG_119_79)
AGAACGCTCGCGCTCACCTTGGCTCAAACGAGAGGCTTGGAGCCCCAGCC
AGCGCCCGCCCTCACGGGTGCAGATTGGGTGGCCGTTGAACAGGAAGCTG
CCCGCTGCGGTCGCGGCAAGAGTCCCTGCGCCATTTGCCGCGAGAGTTTT
AAGTGCTCCCGGCAAGCACTGCTAAGTTGCGGTCACATTTTTCATGCTGC
TTGCCTTTCCAGCTTTGAGCGGTTTACCCGGACACGCAACGAGGCTGAAA
GATGTCCCTTGTGTCGGAACAGCGGCTACCAGAAATGCACAACAATGCTG
GGGACTCAGGCGTGGCGACAGGCCTGTGCTATCAAAGTGCAAGCTTGGAT
TCGAGGCCGGCTGGCCCGACGACAGCTGCGACGCCTCTTCCGTGCTAGGT
ACCGTGGAGGCCGCGGCGATTCGGAGTGCCGGCGACGCTTCTTTGCTTCG
GAGCTCGGCGAGTGTGCGAGCCGCATGGAAAAGGACGTGGGAATACGTGC
CGAGTCGCTAGATATGCTTTTTGCAGAGCTCGATGCCGGCCTCGCCTTCT
CCAGAGAAGTCTTCAACACCCAGCGCGCTGCGCCCGCCTGCGACCACGGA
ATTGAGGCTTGCACCCCCAGCAGCTGCAGGATTAGCGGTTGGCAAGCGGC
AGAGGCATCTCCAGCCAGCGGGATCAGAGAGGACGGCAAAGCTGCGGAGC
TGGAGGCGTGGGCCGTCGCGTTCGCGCGAGCGCGGGAGCGCGACACGCTC
GAGTGTCCAATTTGCATGAACGACATGTGCTCTCTCTTCGCGCCGCGACC
GGTGCTGTTGCTGTCGTGTTCCCACGTGATGCACCTGGCGTGCCTGCATT
CGTTCGAAGATTTTGGCGGCGGCGCGGGCGGCGTATCGCCCGGCTGCCCG
GTCTGCCGATCCACATACAAAAGCACAACG
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