mRNA_P-wetherbeei_contig1690.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1690.1.1 vs. uniprot
Match: A0A835ZAA6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAA6_9STRA) HSP 1 Score: 172 bits (436), Expect = 1.940e-51 Identity = 78/125 (62.40%), Postives = 99/125 (79.20%), Query Frame = 1
Query: 1 ADSFGEAMPRLNSLVLVGRCGNDPVPRYLNDGKVVLNLSLAVKREYHSLERTARGIRYGEEETDWFPLEIWNREAEYAAKVITKGARIGIRGSFVCDQWTDSEGNERRTPKVLVNSIDLLESRAE 375
+ F E++P+LN+++L GR G DPV RY +DGK V+ LSLAVKREYH+LER A GIRYGEEETDWF LE+W+REAEYA KV KG R+GI GS V D W D EG ER T KV+V+++++LE++AE
Sbjct: 77 SSGFAESIPKLNAVLLTGRLGQDPVARYFDDGKCVVQLSLAVKREYHALERKAMGIRYGEEETDWFQLELWSREAEYAMKVAAKGLRVGIEGSLVIDCWEDQEGEERATAKVIVSNMEVLETKAE 201
BLAST of mRNA_P-wetherbeei_contig1690.1.1 vs. uniprot
Match: B8C9K7_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C9K7_THAPS) HSP 1 Score: 164 bits (414), Expect = 1.110e-49 Identity = 79/128 (61.72%), Postives = 92/128 (71.88%), Query Frame = 1
Query: 1 ADSFGEAMPRLNSLVLVGRCGNDPVPRYLNDGKVVLNLSLAVKREYHSLERTARGIRYGEEETDWFPLEIWNREAEYAAKVITKGARIGIRGSFVCDQWTDS-EGNERRTPKVLVNSIDLLESRAERE 381
A F E +P+LN + LVGR G P P+Y +DGKVVLNLS+AVKR+YH LER R IR GEEETDWFPLE W R+AEY + KGARIGI GS V D W D G +RR PK++V ID+LESRAE E
Sbjct: 3 ATPFDEHLPKLNVVTLVGRVGGTPDPKYFDDGKVVLNLSVAVKRKYHPLERKVRNIRSGEEETDWFPLEFWGRDAEYVTNYVEKGARIGITGSLVMDGWVDKMTGEQRRRPKIVVRHIDILESRAEAE 130
BLAST of mRNA_P-wetherbeei_contig1690.1.1 vs. uniprot
Match: K0SQT6_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SQT6_THAOC) HSP 1 Score: 164 bits (416), Expect = 1.120e-48 Identity = 79/127 (62.20%), Postives = 94/127 (74.02%), Query Frame = 1
Query: 10 FGEAMPRLNSLVLVGRCGNDPVPRYLNDGKVVLNLSLAVKREYHSLERTARGIRYGEEETDWFPLEIWNREAEYAAKVITKGARIGIRGSFVCDQWTDS-EGNERRTPKVLVNSIDLLESRAERETR 387
F E +P+LNS+ LVGR GN+P P+Y +DGKVVLNLSLA KR+YH LER R I+ GEEETDWF LEIW R+AEY A + KGAR+GI GS V D W D G +RR PK+ V +D+LESRAE E R
Sbjct: 73 FDEHLPKLNSVTLVGRVGNEPEPKYFDDGKVVLNLSLACKRKYHPLERKVREIKSGEEETDWFALEIWGRDAEYVANYVDKGARMGITGSLVQDSWIDKVSGMKRRKPKIAVRQVDVLESRAEAELR 199
BLAST of mRNA_P-wetherbeei_contig1690.1.1 vs. uniprot
Match: D8LMF5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMF5_ECTSI) HSP 1 Score: 166 bits (419), Expect = 2.120e-48 Identity = 77/131 (58.78%), Postives = 95/131 (72.52%), Query Frame = 1
Query: 1 ADSFGEAMPRLNSLVLVGRCGNDPVPRYLNDGKVVLNLSLAVKREYHSLERTARGIRYGEEETDWFPLEIWNREAEYAAKVITKGARIGIRGSFVCDQWTDSEGNERRTPKVLVNSIDLLESRAERETRGD 393
+D F E +PRLN + L G G DP P+Y + G+VVLNLSLAVKREYH LER A GI GEEETDWF LE+WNR+AEYAAKV KG R+G+ G W D EGN+R T K+LV ++++L+SRAE+ R D
Sbjct: 39 SDGFDEGVPRLNMVFLTGYLGQDPKPKYFDSGRVVLNLSLAVKREYHPLERKALGIVQGEEETDWFQLEMWNRDAEYAAKVCKKGGRVGVTGGLSLQSWIDREGNDRTTVKILVQNLEVLDSRAEQAMRSD 169
BLAST of mRNA_P-wetherbeei_contig1690.1.1 vs. uniprot
Match: A0A7R9W4H7_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W4H7_9STRA) HSP 1 Score: 164 bits (416), Expect = 2.560e-48 Identity = 78/127 (61.42%), Postives = 95/127 (74.80%), Query Frame = 1
Query: 10 FGEAMPRLNSLVLVGRCGNDPVPRYLNDGKVVLNLSLAVKREYHSLERTARGIRYGEEETDWFPLEIWNREAEYAAKVITKGARIGIRGSFVCDQWTDSEGNERRTP-KVLVNSIDLLESRAERETR 387
F + +PRLN + L GR GNDP PRY +DGKVVLNLSLAV+R+YH LER R I+YGEEETDWFPLE+W R+AE+A+ + KGARIGI GS + D W D E RT K+LV +D+LE+RAE E R
Sbjct: 100 FEDHIPRLNIVTLSGRVGNDPEPRYFDDGKVVLNLSLAVQRKYHPLERKVRNIKYGEEETDWFPLELWGRDAEFASNFVDKGARIGITGSLMMDSWEDRNTGEPRTKHKILVKHLDILETRAEAEAR 226
BLAST of mRNA_P-wetherbeei_contig1690.1.1 vs. uniprot
Match: A0A7S2SIA7_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SIA7_9STRA) HSP 1 Score: 162 bits (411), Expect = 1.870e-47 Identity = 76/130 (58.46%), Postives = 98/130 (75.38%), Query Frame = 1
Query: 1 ADSFGEAMPRLNSLVLVGRCGNDPVPRYLNDGKVVLNLSLAVKREYHSLERTARGIRYGEEETDWFPLEIWNREAEYAAKVITKGARIGIRGSFVCDQWTD-SEGNERRTPKVLVNSIDLLESRAERETR 387
A F E +PR+NS+ LVGR G DP P+YL+DGKVVLNLSLAVKR+YH LER R I+ GEEETDWFPLEIW R+AEYA+K + KG+R+ + G+ D WTD + G R+ K++V +D+LE++AE E R
Sbjct: 100 ASEFEEHIPRVNSVTLVGRVGQDPDPKYLDDGKVVLNLSLAVKRKYHPLERNVRNIKSGEEETDWFPLEIWGRDAEYASKYVDKGSRMMVTGTLQIDTWTDRNTGEPRKKAKIIVRHLDILETKAEAELR 229
BLAST of mRNA_P-wetherbeei_contig1690.1.1 vs. uniprot
Match: A0A7S1DC37_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DC37_CYCTE) HSP 1 Score: 160 bits (406), Expect = 7.000e-47 Identity = 77/130 (59.23%), Postives = 97/130 (74.62%), Query Frame = 1
Query: 1 ADSFGEAMPRLNSLVLVGRCGNDPVPRYLNDGKVVLNLSLAVKREYHSLERTARGIRYGEEETDWFPLEIWNREAEYAAKVITKGARIGIRGSFVCDQWTD-SEGNERRTPKVLVNSIDLLESRAERETR 387
A + +P N++ +VGR GNDP P+YL+ GKVVLNLSLAVKR+YH LER A+ I+ GEEETDW+ LEIW + AEYAAK +TKGARIG+ GS DQW D + GN R PK++V +D+LE+RAE E R
Sbjct: 85 AGEWPSDIPTFNNVFMVGRVGNDPEPKYLDSGKVVLNLSLAVKRKYHRLERIAKEIKSGEEETDWYRLEIWGQTAEYAAKYVTKGARIGLSGSLRIDQWEDRTSGNMRARPKIVVQELDILETRAEAELR 214
BLAST of mRNA_P-wetherbeei_contig1690.1.1 vs. uniprot
Match: A0A7S1YYF7_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YYF7_TRICV) HSP 1 Score: 157 bits (398), Expect = 9.820e-46 Identity = 74/130 (56.92%), Postives = 93/130 (71.54%), Query Frame = 1
Query: 1 ADSFGEAMPRLNSLVLVGRCGNDPVPRYLNDGKVVLNLSLAVKREYHSLERTARGIRYGEEETDWFPLEIWNREAEYAAKVITKGARIGIRGSFVCDQWTDSEGNERRTP-KVLVNSIDLLESRAERETR 387
+ F + +PRLN + L GR GNDP PRY +DGKVVLNLSLA KR+YH LER R I+YGEEETDW+PLE+W R+AE+ +K + KGARIGI GS D W D E R+ K+ V +DLLE++AE + R
Sbjct: 100 SSEFEDHIPRLNIVTLSGRVGNDPEPRYFDDGKVVLNLSLACKRKYHPLERKVRNIKYGEEETDWWPLEMWGRDAEFVSKYVNKGARIGITGSLTMDSWVDKNTGEPRSKYKIQVKHLDLLETKAEADLR 229
BLAST of mRNA_P-wetherbeei_contig1690.1.1 vs. uniprot
Match: A0A7S1ZHN3_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZHN3_9STRA) HSP 1 Score: 156 bits (395), Expect = 7.010e-45 Identity = 72/127 (56.69%), Postives = 94/127 (74.02%), Query Frame = 1
Query: 10 FGEAMPRLNSLVLVGRCGNDPVPRYLNDGKVVLNLSLAVKREYHSLERTARGIRYGEEETDWFPLEIWNREAEYAAKVITKGARIGIRGSFVCDQWTDSE-GNERRTPKVLVNSIDLLESRAERETR 387
F +P+LN + L GR GN P PRY +DGKVVLN+ LAVKR+YH LER + I+YG+EETDWF LE+W R+AE+AA+ + KG+RIGI GS D WTD + G RR PK++V +D+LE++AE E R
Sbjct: 109 FEPHIPKLNVVTLSGRVGNVPEPRYFDDGKVVLNMGLAVKRKYHPLERKVKNIQYGQEETDWFNLELWGRDAEFAARFVDKGSRIGITGSLAIDSWTDKQTGQYRRKPKIVVRHLDVLETKAEAELR 235
BLAST of mRNA_P-wetherbeei_contig1690.1.1 vs. uniprot
Match: A0A7S2USN2_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2USN2_9STRA) HSP 1 Score: 150 bits (379), Expect = 2.470e-43 Identity = 72/128 (56.25%), Postives = 94/128 (73.44%), Query Frame = 1
Query: 10 FGEAMPRLNSLVLVGRCGNDPV-PRYLNDGKVVLNLSLAVKREYHSLERTARGIRYGEEETDWFPLEIWNREAEYAAKVITKGARIGIRGSFVCDQWTD-SEGNERRTPKVLVNSIDLLESRAERETR 387
F + +P+ N + L GR GN + P+Y +DGKVVL+LSLAVKR+YH LER A I+ G+EETDWF LEIW R+AEYAAK + KG+RIG+ GS V D WTD + G R PK+LV +D+LE++AE + R
Sbjct: 36 FADHIPKFNVVTLSGRVGNPQLEPKYFDDGKVVLSLSLAVKRKYHPLERRAYNIKSGDEETDWFALEIWGRDAEYAAKYVEKGSRIGVTGSLVVDNWTDRATGEPRSRPKILVKQLDILETKAEADLR 163 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1690.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1690.1.1 >prot_P-wetherbeei_contig1690.1.1 ID=prot_P-wetherbeei_contig1690.1.1|Name=mRNA_P-wetherbeei_contig1690.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=129bp MPRLNSLVLVGRCGNDPVPRYLNDGKVVLNLSLAVKREYHSLERTARGIRback to top mRNA from alignment at P-wetherbeei_contig1690:629..1353- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1690.1.1 ID=mRNA_P-wetherbeei_contig1690.1.1|Name=mRNA_P-wetherbeei_contig1690.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=725bp|location=Sequence derived from alignment at P-wetherbeei_contig1690:629..1353- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1690:629..1353- >mRNA_P-wetherbeei_contig1690.1.1 ID=mRNA_P-wetherbeei_contig1690.1.1|Name=mRNA_P-wetherbeei_contig1690.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=387bp|location=Sequence derived from alignment at P-wetherbeei_contig1690:629..1353- (Phaeothamnion wetherbeei SAG_119_79)back to top |