prot_P-wetherbeei_contig16724.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig16724.1.1
Unique Nameprot_P-wetherbeei_contig16724.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length117
Homology
BLAST of mRNA_P-wetherbeei_contig16724.1.1 vs. uniprot
Match: D8LJ53_ECTSI (AAA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJ53_ECTSI)

HSP 1 Score: 187 bits (476), Expect = 8.470e-57
Identity = 89/117 (76.07%), Postives = 103/117 (88.03%), Query Frame = 0
Query:    1 MRNALNNLQSTHSGFEHVTQENVFKVCDQPHPKTVLAILKACVAGESLDAARQMKALYDTGYSSNDIIGTVFKVCKGQLDLGEEAKLEVIKEIGFTHMRIADGVNSLLQLLGLCGRL 117
            MRNALNNLQ+THSGF HV Q NVFKVCDQPHP  VL ILK+CV G+   A+R+MKALYDTGYSSNDIIGTVF+VCK QL++ E AKLE+IKE+GFTH+R+ADGVNSLLQL+G+C RL
Sbjct:  203 MRNALNNLQATHSGFGHVDQANVFKVCDQPHPGVVLEILKSCVEGDCAKASRRMKALYDTGYSSNDIIGTVFRVCKNQLEVNEGAKLEMIKEVGFTHVRVADGVNSLLQLMGMCARL 319          
BLAST of mRNA_P-wetherbeei_contig16724.1.1 vs. uniprot
Match: A0A835YM50_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM50_9STRA)

HSP 1 Score: 184 bits (468), Expect = 1.720e-55
Identity = 93/117 (79.49%), Postives = 101/117 (86.32%), Query Frame = 0
Query:    1 MRNALNNLQSTHSGFEHVTQENVFKVCDQPHPKTVLAILKACVAGESLDAARQMKALYDTGYSSNDIIGTVFKVCKGQLDLGEEAKLEVIKEIGFTHMRIADGVNSLLQLLGLCGRL 117
            MRNALNNLQSTHSGF  VTQE VFKVCDQPHP  VLAIL+ACVAG+  +A  +MKALYDTGYSSNDII TVFKVCK QL + E A+LE+IKEIG THMR+ADGVNSLLQLLGLC RL
Sbjct:  212 MRNALNNLQSTHSGFGRVTQETVFKVCDQPHPGVVLAILQACVAGDMRNAHLKMKALYDTGYSSNDIIATVFKVCKNQLKVPEAAQLELIKEIGVTHMRVADGVNSLLQLLGLCARL 328          
BLAST of mRNA_P-wetherbeei_contig16724.1.1 vs. uniprot
Match: A0A7S2K8F5_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K8F5_9STRA)

HSP 1 Score: 165 bits (418), Expect = 8.210e-49
Identity = 81/117 (69.23%), Postives = 93/117 (79.49%), Query Frame = 0
Query:    1 MRNALNNLQSTHSGFEHVTQENVFKVCDQPHPKTVLAILKACVAGESLDAARQMKALYDTGYSSNDIIGTVFKVCKGQLDLGEEAKLEVIKEIGFTHMRIADGVNSLLQLLGLCGRL 117
            MRNALNNLQ+THSGF H+ Q NVFKVCDQPHP  V  I+ AC+ GE+  A  QMKAL+ TGYS NDIIGT+FKV +  LD+ E  KLE ++EIGFTHMRIA+GVNSLLQLLGL  RL
Sbjct:  141 MRNALNNLQATHSGFGHINQVNVFKVCDQPHPTVVRGIISACIKGETAVAVDQMKALWGTGYSCNDIIGTLFKVTRANLDIPEALKLEYLREIGFTHMRIAEGVNSLLQLLGLVSRL 257          
BLAST of mRNA_P-wetherbeei_contig16724.1.1 vs. uniprot
Match: A0A7S4DIG0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DIG0_HETAK)

HSP 1 Score: 155 bits (391), Expect = 3.030e-45
Identity = 78/117 (66.67%), Postives = 92/117 (78.63%), Query Frame = 0
Query:    1 MRNALNNLQSTHSGFEHVTQENVFKVCDQPHPKTVLAILKACVAGESLDAARQMKALYDTGYSSNDIIGTVFKVCKGQLDLGEEAKLEVIKEIGFTHMRIADGVNSLLQLLGLCGRL 117
            MRNALNNLQ+TH+GF  V Q NVFKVCDQPHP TV AIL  C+ G+ + A  +M ALY+TGY++ DII TVFKVC+   D+ E  KLE +KEIGF HMRIA+GV+SLLQLLGLC RL
Sbjct:   97 MRNALNNLQATHAGFGFVDQGNVFKVCDQPHPATVKAILDRCIQGDIMAAKNEMTALYNTGYATTDIISTVFKVCRYH-DMDENVKLEWMKEIGFMHMRIAEGVDSLLQLLGLCARL 212          
BLAST of mRNA_P-wetherbeei_contig16724.1.1 vs. uniprot
Match: A0A7S4MNC2_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MNC2_9STRA)

HSP 1 Score: 154 bits (389), Expect = 1.570e-44
Identity = 79/117 (67.52%), Postives = 93/117 (79.49%), Query Frame = 0
Query:    1 MRNALNNLQSTHSGFEHVTQENVFKVCDQPHPKTVLAILKACVAGESLDAARQMKALYDTGYSSNDIIGTVFKVCKGQLDLGEEAKLEVIKEIGFTHMRIADGVNSLLQLLGLCGRL 117
            MRNALNNLQ+T SGF H+ Q NVFKVCDQPHP TV  I++ CV GE+  A R ++AL+ TGYSS+DIIGT+FKV K   D+ E  KLE ++EIGFTHM+IADGVNSLLQLLGL  RL
Sbjct:  136 MRNALNNLQATTSGFGHINQTNVFKVCDQPHPTTVRTIVEHCVKGETGSAVRLVRALWGTGYSSSDIIGTLFKVTKAY-DMPEALKLEFLREIGFTHMKIADGVNSLLQLLGLTSRL 251          
BLAST of mRNA_P-wetherbeei_contig16724.1.1 vs. uniprot
Match: A0A7S3YH79_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YH79_HETAK)

HSP 1 Score: 155 bits (391), Expect = 3.160e-44
Identity = 78/117 (66.67%), Postives = 92/117 (78.63%), Query Frame = 0
Query:    1 MRNALNNLQSTHSGFEHVTQENVFKVCDQPHPKTVLAILKACVAGESLDAARQMKALYDTGYSSNDIIGTVFKVCKGQLDLGEEAKLEVIKEIGFTHMRIADGVNSLLQLLGLCGRL 117
            MRNALNNLQ+TH+GF  V Q NVFKVCDQPHP TV AIL  C+ G+ + A  +M ALY+TGY++ DII TVFKVC+   D+ E  KLE +KEIGF HMRIA+GV+SLLQLLGLC RL
Sbjct:  185 MRNALNNLQATHAGFGFVDQGNVFKVCDQPHPATVKAILDRCIQGDIMAAKNEMTALYNTGYATTDIISTVFKVCRYH-DMDENVKLEWMKEIGFMHMRIAEGVDSLLQLLGLCARL 300          
BLAST of mRNA_P-wetherbeei_contig16724.1.1 vs. uniprot
Match: A0A7S4MNB7_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MNB7_9STRA)

HSP 1 Score: 154 bits (389), Expect = 1.410e-43
Identity = 79/117 (67.52%), Postives = 93/117 (79.49%), Query Frame = 0
Query:    1 MRNALNNLQSTHSGFEHVTQENVFKVCDQPHPKTVLAILKACVAGESLDAARQMKALYDTGYSSNDIIGTVFKVCKGQLDLGEEAKLEVIKEIGFTHMRIADGVNSLLQLLGLCGRL 117
            MRNALNNLQ+T SGF H+ Q NVFKVCDQPHP TV  I++ CV GE+  A R ++AL+ TGYSS+DIIGT+FKV K   D+ E  KLE ++EIGFTHM+IADGVNSLLQLLGL  RL
Sbjct:  224 MRNALNNLQATTSGFGHINQTNVFKVCDQPHPTTVRTIVEHCVKGETGSAVRLVRALWGTGYSSSDIIGTLFKVTKAY-DMPEALKLEFLREIGFTHMKIADGVNSLLQLLGLTSRL 339          
BLAST of mRNA_P-wetherbeei_contig16724.1.1 vs. uniprot
Match: A0A7S2I8X7_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I8X7_9STRA)

HSP 1 Score: 154 bits (389), Expect = 1.580e-43
Identity = 80/117 (68.38%), Postives = 92/117 (78.63%), Query Frame = 0
Query:    1 MRNALNNLQSTHSGFEHVTQENVFKVCDQPHPKTVLAILKACVAGESLDAARQMKALYDTGYSSNDIIGTVFKVCKGQLDLGEEAKLEVIKEIGFTHMRIADGVNSLLQLLGLCGRL 117
            MRNALNNLQ+T SGF HV Q NVFKVCDQPHP TV AI+  CV GE+  A  Q+K+L+ TGYS +DIIGT+FKV K   D+ E  KLE ++EIGFTHMRIADGV+SLLQLLGL  RL
Sbjct:  222 MRNALNNLQATTSGFGHVNQTNVFKVCDQPHPTTVRAIIDHCVKGETNHAVAQLKSLWGTGYSCSDIIGTLFKVTKAH-DMPEALKLEYLREIGFTHMRIADGVDSLLQLLGLVARL 337          
BLAST of mRNA_P-wetherbeei_contig16724.1.1 vs. uniprot
Match: A0A7S0GFZ5_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GFZ5_9STRA)

HSP 1 Score: 149 bits (377), Expect = 4.830e-43
Identity = 75/117 (64.10%), Postives = 92/117 (78.63%), Query Frame = 0
Query:    1 MRNALNNLQSTHSGFEHVTQENVFKVCDQPHPKTVLAILKACVAGESLDAARQMKALYDTGYSSNDIIGTVFKVCKGQLDLGEEAKLEVIKEIGFTHMRIADGVNSLLQLLGLCGRL 117
            MRNALNNLQ+T SGFE V Q NVFKVCDQPHPK V++IL  C+AGE+ DA   M++L+ +GYS+ DIIGT FKV +  L++ E  KLE ++EIGFTH+RI+DG  S LQLLGL GRL
Sbjct:  102 MRNALNNLQATVSGFEFVNQTNVFKVCDQPHPKVVISILDNCLAGETHDAIGGMESLFTSGYSARDIIGTFFKVTRAHLNIPEALKLEYMREIGFTHIRISDGCASQLQLLGLIGRL 218          
BLAST of mRNA_P-wetherbeei_contig16724.1.1 vs. uniprot
Match: B8LC61_THAPS (Replication factor C 37 KD subunit n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LC61_THAPS)

HSP 1 Score: 151 bits (382), Expect = 1.190e-42
Identity = 75/117 (64.10%), Postives = 94/117 (80.34%), Query Frame = 0
Query:    1 MRNALNNLQSTHSGFEHVTQENVFKVCDQPHPKTVLAILKACVAGESLDAARQMKALYDTGYSSNDIIGTVFKVCKGQLDLGEEAKLEVIKEIGFTHMRIADGVNSLLQLLGLCGRL 117
            MRNALNN+Q+T SGFEHV+Q NVFKVCDQPHPKTV  IL +C+ G++  A  +++ L++TGYS +DIIGT+FKV K   ++ E  KLE ++EIGFTHMRIADGV +LLQLLGL  RL
Sbjct:  211 MRNALNNIQATVSGFEHVSQTNVFKVCDQPHPKTVRGILDSCIKGDTTKAVVEVRNLWNTGYSCSDIIGTLFKVAKSY-EMPEALKLEYLREIGFTHMRIADGVGTLLQLLGLAARL 326          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16724.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJ53_ECTSI8.470e-5776.07AAA domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835YM50_9STRA1.720e-5579.49P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S2K8F5_9STRA8.210e-4969.23Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S4DIG0_HETAK3.030e-4566.67Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S4MNC2_9STRA1.570e-4467.52Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S3YH79_HETAK3.160e-4466.67Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S4MNB7_9STRA1.410e-4367.52Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S2I8X7_9STRA1.580e-4368.38Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S0GFZ5_9STRA4.830e-4364.10Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
B8LC61_THAPS1.190e-4264.10Replication factor C 37 KD subunit n=1 Tax=Thalass... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013748Replication factor C, C-terminalPFAMPF08542Rep_fac_Ccoord: 30..116
e-value: 6.4E-21
score: 74.6
NoneNo IPR availableGENE3D1.20.272.10coord: 30..117
e-value: 1.8E-24
score: 87.5
NoneNo IPR availableGENE3D1.10.8.60coord: 1..29
e-value: 1.5E-7
score: 32.8
NoneNo IPR availablePANTHERPTHR11669:SF5REPLICATION FACTOR C SUBUNIT 2coord: 1..117
NoneNo IPR availablePANTHERPTHR11669REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNITcoord: 1..117
IPR008921DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminalSUPERFAMILY48019post-AAA+ oligomerization domain-likecoord: 29..117

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16724contigP-wetherbeei_contig16724:245..1256 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16724.1.1mRNA_P-wetherbeei_contig16724.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig16724 245..1256 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig16724.1.1 ID=prot_P-wetherbeei_contig16724.1.1|Name=mRNA_P-wetherbeei_contig16724.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=117bp
MRNALNNLQSTHSGFEHVTQENVFKVCDQPHPKTVLAILKACVAGESLDA
ARQMKALYDTGYSSNDIIGTVFKVCKGQLDLGEEAKLEVIKEIGFTHMRI
ADGVNSLLQLLGLCGRL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013748Rep_factorC_C
IPR008921DNA_pol3_clamp-load_cplx_C