mRNA_P-wetherbeei_contig16724.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig16724.1.1 vs. uniprot
Match: D8LJ53_ECTSI (AAA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJ53_ECTSI) HSP 1 Score: 187 bits (476), Expect = 8.470e-57 Identity = 89/117 (76.07%), Postives = 103/117 (88.03%), Query Frame = 1
Query: 1 MRNALNNLQSTHSGFEHVTQENVFKVCDQPHPKTVLAILKACVAGESLDAARQMKALYDTGYSSNDIIGTVFKVCKGQLDLGEEAKLEVIKEIGFTHMRIADGVNSLLQLLGLCGRL 351
MRNALNNLQ+THSGF HV Q NVFKVCDQPHP VL ILK+CV G+ A+R+MKALYDTGYSSNDIIGTVF+VCK QL++ E AKLE+IKE+GFTH+R+ADGVNSLLQL+G+C RL
Sbjct: 203 MRNALNNLQATHSGFGHVDQANVFKVCDQPHPGVVLEILKSCVEGDCAKASRRMKALYDTGYSSNDIIGTVFRVCKNQLEVNEGAKLEMIKEVGFTHVRVADGVNSLLQLMGMCARL 319
BLAST of mRNA_P-wetherbeei_contig16724.1.1 vs. uniprot
Match: A0A835YM50_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM50_9STRA) HSP 1 Score: 184 bits (468), Expect = 1.720e-55 Identity = 93/117 (79.49%), Postives = 101/117 (86.32%), Query Frame = 1
Query: 1 MRNALNNLQSTHSGFEHVTQENVFKVCDQPHPKTVLAILKACVAGESLDAARQMKALYDTGYSSNDIIGTVFKVCKGQLDLGEEAKLEVIKEIGFTHMRIADGVNSLLQLLGLCGRL 351
MRNALNNLQSTHSGF VTQE VFKVCDQPHP VLAIL+ACVAG+ +A +MKALYDTGYSSNDII TVFKVCK QL + E A+LE+IKEIG THMR+ADGVNSLLQLLGLC RL
Sbjct: 212 MRNALNNLQSTHSGFGRVTQETVFKVCDQPHPGVVLAILQACVAGDMRNAHLKMKALYDTGYSSNDIIATVFKVCKNQLKVPEAAQLELIKEIGVTHMRVADGVNSLLQLLGLCARL 328
BLAST of mRNA_P-wetherbeei_contig16724.1.1 vs. uniprot
Match: A0A7S2K8F5_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K8F5_9STRA) HSP 1 Score: 165 bits (418), Expect = 8.210e-49 Identity = 81/117 (69.23%), Postives = 93/117 (79.49%), Query Frame = 1
Query: 1 MRNALNNLQSTHSGFEHVTQENVFKVCDQPHPKTVLAILKACVAGESLDAARQMKALYDTGYSSNDIIGTVFKVCKGQLDLGEEAKLEVIKEIGFTHMRIADGVNSLLQLLGLCGRL 351
MRNALNNLQ+THSGF H+ Q NVFKVCDQPHP V I+ AC+ GE+ A QMKAL+ TGYS NDIIGT+FKV + LD+ E KLE ++EIGFTHMRIA+GVNSLLQLLGL RL
Sbjct: 141 MRNALNNLQATHSGFGHINQVNVFKVCDQPHPTVVRGIISACIKGETAVAVDQMKALWGTGYSCNDIIGTLFKVTRANLDIPEALKLEYLREIGFTHMRIAEGVNSLLQLLGLVSRL 257
BLAST of mRNA_P-wetherbeei_contig16724.1.1 vs. uniprot
Match: A0A7S4DIG0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DIG0_HETAK) HSP 1 Score: 155 bits (391), Expect = 3.030e-45 Identity = 78/117 (66.67%), Postives = 92/117 (78.63%), Query Frame = 1
Query: 1 MRNALNNLQSTHSGFEHVTQENVFKVCDQPHPKTVLAILKACVAGESLDAARQMKALYDTGYSSNDIIGTVFKVCKGQLDLGEEAKLEVIKEIGFTHMRIADGVNSLLQLLGLCGRL 351
MRNALNNLQ+TH+GF V Q NVFKVCDQPHP TV AIL C+ G+ + A +M ALY+TGY++ DII TVFKVC+ D+ E KLE +KEIGF HMRIA+GV+SLLQLLGLC RL
Sbjct: 97 MRNALNNLQATHAGFGFVDQGNVFKVCDQPHPATVKAILDRCIQGDIMAAKNEMTALYNTGYATTDIISTVFKVCRYH-DMDENVKLEWMKEIGFMHMRIAEGVDSLLQLLGLCARL 212
BLAST of mRNA_P-wetherbeei_contig16724.1.1 vs. uniprot
Match: A0A7S4MNC2_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MNC2_9STRA) HSP 1 Score: 154 bits (389), Expect = 1.570e-44 Identity = 79/117 (67.52%), Postives = 93/117 (79.49%), Query Frame = 1
Query: 1 MRNALNNLQSTHSGFEHVTQENVFKVCDQPHPKTVLAILKACVAGESLDAARQMKALYDTGYSSNDIIGTVFKVCKGQLDLGEEAKLEVIKEIGFTHMRIADGVNSLLQLLGLCGRL 351
MRNALNNLQ+T SGF H+ Q NVFKVCDQPHP TV I++ CV GE+ A R ++AL+ TGYSS+DIIGT+FKV K D+ E KLE ++EIGFTHM+IADGVNSLLQLLGL RL
Sbjct: 136 MRNALNNLQATTSGFGHINQTNVFKVCDQPHPTTVRTIVEHCVKGETGSAVRLVRALWGTGYSSSDIIGTLFKVTKAY-DMPEALKLEFLREIGFTHMKIADGVNSLLQLLGLTSRL 251
BLAST of mRNA_P-wetherbeei_contig16724.1.1 vs. uniprot
Match: A0A7S3YH79_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YH79_HETAK) HSP 1 Score: 155 bits (391), Expect = 3.160e-44 Identity = 78/117 (66.67%), Postives = 92/117 (78.63%), Query Frame = 1
Query: 1 MRNALNNLQSTHSGFEHVTQENVFKVCDQPHPKTVLAILKACVAGESLDAARQMKALYDTGYSSNDIIGTVFKVCKGQLDLGEEAKLEVIKEIGFTHMRIADGVNSLLQLLGLCGRL 351
MRNALNNLQ+TH+GF V Q NVFKVCDQPHP TV AIL C+ G+ + A +M ALY+TGY++ DII TVFKVC+ D+ E KLE +KEIGF HMRIA+GV+SLLQLLGLC RL
Sbjct: 185 MRNALNNLQATHAGFGFVDQGNVFKVCDQPHPATVKAILDRCIQGDIMAAKNEMTALYNTGYATTDIISTVFKVCRYH-DMDENVKLEWMKEIGFMHMRIAEGVDSLLQLLGLCARL 300
BLAST of mRNA_P-wetherbeei_contig16724.1.1 vs. uniprot
Match: A0A7S4MNB7_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MNB7_9STRA) HSP 1 Score: 154 bits (389), Expect = 1.410e-43 Identity = 79/117 (67.52%), Postives = 93/117 (79.49%), Query Frame = 1
Query: 1 MRNALNNLQSTHSGFEHVTQENVFKVCDQPHPKTVLAILKACVAGESLDAARQMKALYDTGYSSNDIIGTVFKVCKGQLDLGEEAKLEVIKEIGFTHMRIADGVNSLLQLLGLCGRL 351
MRNALNNLQ+T SGF H+ Q NVFKVCDQPHP TV I++ CV GE+ A R ++AL+ TGYSS+DIIGT+FKV K D+ E KLE ++EIGFTHM+IADGVNSLLQLLGL RL
Sbjct: 224 MRNALNNLQATTSGFGHINQTNVFKVCDQPHPTTVRTIVEHCVKGETGSAVRLVRALWGTGYSSSDIIGTLFKVTKAY-DMPEALKLEFLREIGFTHMKIADGVNSLLQLLGLTSRL 339
BLAST of mRNA_P-wetherbeei_contig16724.1.1 vs. uniprot
Match: A0A7S2I8X7_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I8X7_9STRA) HSP 1 Score: 154 bits (389), Expect = 1.580e-43 Identity = 80/117 (68.38%), Postives = 92/117 (78.63%), Query Frame = 1
Query: 1 MRNALNNLQSTHSGFEHVTQENVFKVCDQPHPKTVLAILKACVAGESLDAARQMKALYDTGYSSNDIIGTVFKVCKGQLDLGEEAKLEVIKEIGFTHMRIADGVNSLLQLLGLCGRL 351
MRNALNNLQ+T SGF HV Q NVFKVCDQPHP TV AI+ CV GE+ A Q+K+L+ TGYS +DIIGT+FKV K D+ E KLE ++EIGFTHMRIADGV+SLLQLLGL RL
Sbjct: 222 MRNALNNLQATTSGFGHVNQTNVFKVCDQPHPTTVRAIIDHCVKGETNHAVAQLKSLWGTGYSCSDIIGTLFKVTKAH-DMPEALKLEYLREIGFTHMRIADGVDSLLQLLGLVARL 337
BLAST of mRNA_P-wetherbeei_contig16724.1.1 vs. uniprot
Match: A0A7S0GFZ5_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GFZ5_9STRA) HSP 1 Score: 149 bits (377), Expect = 4.830e-43 Identity = 75/117 (64.10%), Postives = 92/117 (78.63%), Query Frame = 1
Query: 1 MRNALNNLQSTHSGFEHVTQENVFKVCDQPHPKTVLAILKACVAGESLDAARQMKALYDTGYSSNDIIGTVFKVCKGQLDLGEEAKLEVIKEIGFTHMRIADGVNSLLQLLGLCGRL 351
MRNALNNLQ+T SGFE V Q NVFKVCDQPHPK V++IL C+AGE+ DA M++L+ +GYS+ DIIGT FKV + L++ E KLE ++EIGFTH+RI+DG S LQLLGL GRL
Sbjct: 102 MRNALNNLQATVSGFEFVNQTNVFKVCDQPHPKVVISILDNCLAGETHDAIGGMESLFTSGYSARDIIGTFFKVTRAHLNIPEALKLEYMREIGFTHIRISDGCASQLQLLGLIGRL 218
BLAST of mRNA_P-wetherbeei_contig16724.1.1 vs. uniprot
Match: B8LC61_THAPS (Replication factor C 37 KD subunit n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LC61_THAPS) HSP 1 Score: 151 bits (382), Expect = 1.190e-42 Identity = 75/117 (64.10%), Postives = 94/117 (80.34%), Query Frame = 1
Query: 1 MRNALNNLQSTHSGFEHVTQENVFKVCDQPHPKTVLAILKACVAGESLDAARQMKALYDTGYSSNDIIGTVFKVCKGQLDLGEEAKLEVIKEIGFTHMRIADGVNSLLQLLGLCGRL 351
MRNALNN+Q+T SGFEHV+Q NVFKVCDQPHPKTV IL +C+ G++ A +++ L++TGYS +DIIGT+FKV K ++ E KLE ++EIGFTHMRIADGV +LLQLLGL RL
Sbjct: 211 MRNALNNIQATVSGFEHVSQTNVFKVCDQPHPKTVRGILDSCIKGDTTKAVVEVRNLWNTGYSCSDIIGTLFKVAKSY-EMPEALKLEYLREIGFTHMRIADGVGTLLQLLGLAARL 326 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16724.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig16724.1.1 >prot_P-wetherbeei_contig16724.1.1 ID=prot_P-wetherbeei_contig16724.1.1|Name=mRNA_P-wetherbeei_contig16724.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=117bp MRNALNNLQSTHSGFEHVTQENVFKVCDQPHPKTVLAILKACVAGESLDAback to top mRNA from alignment at P-wetherbeei_contig16724:245..1256+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig16724.1.1 ID=mRNA_P-wetherbeei_contig16724.1.1|Name=mRNA_P-wetherbeei_contig16724.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1012bp|location=Sequence derived from alignment at P-wetherbeei_contig16724:245..1256+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig16724:245..1256+ >mRNA_P-wetherbeei_contig16724.1.1 ID=mRNA_P-wetherbeei_contig16724.1.1|Name=mRNA_P-wetherbeei_contig16724.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=351bp|location=Sequence derived from alignment at P-wetherbeei_contig16724:245..1256+ (Phaeothamnion wetherbeei SAG_119_79)back to top |