mRNA_P-wetherbeei_contig1662.6.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1662.6.1 vs. uniprot
Match: A0A2V6WMI5_9BACT (Arabinose ABC transporter permease n=2 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V6WMI5_9BACT) HSP 1 Score: 144 bits (363), Expect = 2.540e-38 Identity = 82/179 (45.81%), Postives = 123/179 (68.72%), Query Frame = 1
Query: 1 RWGVLALMFLVGLAAAMQVQSVQALAPLLVARVGLSYAEIGTLTGLFMLPGVFLAMPGGMLAARLGDRRAMAIALSLMLVSSLLFAATESYAVMVVARLVGGSGAAVLTTQGLKVVTDWFAGREISTAMAINAASFGLGIGMATGLLSGIAAVSSWQAAMLASAALIGAALAIVLAVYR 537
RW LALMF+ + Q QS+ +LAPL+VA +GLSYA++GTL GL++LPGV LA+PGG++ R+GDRRA+ +L+LM+V LL A ++S+A RLV G G+ ++ +K+ DWFAGRE++TAMA+ ++ +G+G+AT L +A +SW+ AM+ +A L I+ V+R
Sbjct: 4 RWVALALMFVTRTSMGFQFQSIGSLAPLVVADLGLSYAQLGTLIGLYLLPGVVLALPGGLIGQRVGDRRAVVASLALMVVGGLLTAWSDSFAGAAAGRLVSGGGSVLMNILLIKITADWFAGREMATAMAVILTAWPVGLGLATATLGSVAMATSWRTAMVVAAVSAALGLIIMAVVFR 182
BLAST of mRNA_P-wetherbeei_contig1662.6.1 vs. uniprot
Match: A0A3N5IER3_9BACT (MFS transporter (Fragment) n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A3N5IER3_9BACT) HSP 1 Score: 136 bits (342), Expect = 8.110e-37 Identity = 79/175 (45.14%), Postives = 115/175 (65.71%), Query Frame = 1
Query: 1 RWGVLALMFLVGLAAAMQVQSVQALAPLLVARVGLSYAEIGTLTGLFMLPGVFLAMPGGMLAARLGDRRAMAIALSLMLVSSLLFAATESYAVMVVARLVGGSGAAVLTTQGLKVVTDWFAGREISTAMAINAASFGLGIGMATGLLSGIAAVSSWQAAMLASAALIGAALAIVL 525
RW VLAL+FL + Q QSV ++APL++A +GLSYA++GTL GL+MLPG A+PGG++ R G+RR + L+LM+ L A + V RL+ G GA V+ K+V+DWF G+E+STAMAI S+ +G+G+A L G+ A +SW+ A++A+AA G L ++L
Sbjct: 4 RWIVLALVFLTRTSMGFQFQSVASVAPLMIADLGLSYAQLGTLLGLYMLPGAVFALPGGVIGQRFGERRIVVAGLALMIAGGALTAGAGGFGTAVTGRLLSGVGAVVMNILLAKIVSDWFTGKELSTAMAIMLTSWPVGLGLAATTLGGVGAGTSWRTAVMATAAAAGLGLLLML 178
BLAST of mRNA_P-wetherbeei_contig1662.6.1 vs. uniprot
Match: A0A2V6YDB6_9BACT (Arabinose ABC transporter permease n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V6YDB6_9BACT) HSP 1 Score: 137 bits (344), Expect = 1.680e-35 Identity = 81/175 (46.29%), Postives = 119/175 (68.00%), Query Frame = 1
Query: 1 RWGVLALMFLVGLAAAMQVQSVQALAPLLVARVGLSYAEIGTLTGLFMLPGVFLAMPGGMLAARLGDRRAMAIALSLMLVSSLLFAATESYAVMVVARLVGGSGAAVLTTQGLKVVTDWFAGREISTAMAINAASFGLGIGMATGLLSGIAAVSSWQAAMLASAALIGAALAIVL 525
RW L ++F+ L+ Q QSV ++ PLLV +GL++ ++G+L GL+MLPG F A+PGGML R+G+RR + +L+LM+V L+ AA+ +AV RLV G GA ++ K+V DWFAGRE+STAMA+ S+ +G+G+A L G+A SSW+ A+ A+A + AAL +VL
Sbjct: 4 RWVALTIVFVTRLSMGYQFQSVASVGPLLVPELGLTWTQLGSLIGLYMLPGAFFALPGGMLGQRVGERRTVVGSLALMVVGGLVTAASHGFAVAAAGRLVSGVGAVLMNILLAKMVADWFAGREMSTAMAVMLTSWPVGLGLAAATLGGLATASSWRMAIAATA--LAAALGLVL 176
BLAST of mRNA_P-wetherbeei_contig1662.6.1 vs. uniprot
Match: UPI002013832F (MFS transporter n=1 Tax=Bradyrhizobium sp. AUGA SZCCT0222 TaxID=2807668 RepID=UPI002013832F) HSP 1 Score: 130 bits (327), Expect = 1.650e-34 Identity = 81/179 (45.25%), Postives = 114/179 (63.69%), Query Frame = 1
Query: 1 RWGVLALMFLVGLAAAMQVQSVQALAPLLVARVGLSYAEIGTLTGLFMLPGVFLAMPGGMLAARLGDRRAMAIALSLMLVSSLLFAATESYAVMVVARLVGGSGAAVLTTQGLKVVTDWFAGREISTAMAINAASFGLGIGMATGLLSGIAAVSSWQAAMLASAALIGAALAIVLAVYR 537
RWG+LA++F+V L A Q QSV A+APLL + G+S A+IG L GL+ PGV +A+PGG + R GD+R + AL+LML+ +L A ++S+ V + RL+ G+G +L Q K+V DWFAGREI+TAMAI S+ GI ++ L I A + AALIG + ++ A YR
Sbjct: 4 RWGILAILFVVRLTMAFQFQSVAAVAPLLGTKFGVSLADIGLLIGLYFTPGVAIALPGGAIGQRFGDKRTVFAALALMLIGNLAMALSDSWTVQMAGRLIAGAGGVLLNVQMTKMVADWFAGREIATAMAIFINSWPAGIALSLLTLPAIGTAWGVSAVYFSVAALIGLGIILLAAGYR 182
BLAST of mRNA_P-wetherbeei_contig1662.6.1 vs. uniprot
Match: A0A2V7HKX2_9BACT (Arabinose ABC transporter permease n=2 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V7HKX2_9BACT) HSP 1 Score: 133 bits (335), Expect = 4.040e-34 Identity = 75/179 (41.90%), Postives = 123/179 (68.72%), Query Frame = 1
Query: 1 RWGVLALMFLVGLAAAMQVQSVQALAPLLVARVGLSYAEIGTLTGLFMLPGVFLAMPGGMLAARLGDRRAMAIALSLMLVSSLLFAATESYAVMVVARLVGGSGAAVLTTQGLKVVTDWFAGREISTAMAINAASFGLGIGMATGLLSGIAAVSSWQAAMLASAALIGAALAIVLAVYR 537
RW L L+F+ + +Q QS+ ++ PL+V +GLSYA++GTL GL++LPGV LA+PGG+L RLG RRA+ +L++M+V L+ A ++ +A V R++ GSGA ++ +KV DWFAGRE++TAMA+ ++ +G+G+A L G+A +SW+ +++ +AA L ++ +V+R
Sbjct: 17 RWLALTLIFVTRTSMGVQFQSIASVGPLIVTDLGLSYAQVGTLLGLYLLPGVALALPGGLLGQRLGGRRALVGSLAVMVVGGLVTAWSDGFAGAAVGRVLSGSGAVLMNILLVKVTADWFAGREMATAMAVMLTAWPVGLGLAAASLGGLATATSWRTSLVVAAAPAALGLVLMASVFR 195
BLAST of mRNA_P-wetherbeei_contig1662.6.1 vs. uniprot
Match: UPI0015526C07 (MFS transporter n=1 Tax=Alterinioella nitratireducens TaxID=2735915 RepID=UPI0015526C07) HSP 1 Score: 132 bits (333), Expect = 6.460e-34 Identity = 82/179 (45.81%), Postives = 112/179 (62.57%), Query Frame = 1
Query: 1 RWGVLALMFLVGLAAAMQVQSVQALAPLLVARVGLSYAEIGTLTGLFMLPGVFLAMPGGMLAARLGDRRAMAIALSLMLVSSLLFAATESYAVMVVARLVGGSGAAVLTTQGLKVVTDWFAGREISTAMAINAASFGLGIGMATGLLSGIAAVSSWQAAMLASAALIGAALAIVLAVYR 537
RW +LA++F+ A A Q Q V AL+PL V G+ A+IG L GL+ PGV +A+PGG LAAR GD+R + +A +LML L +S+A + AR++ G G L G KVV DWFAGREI TAMAI S+ +GI +A +L G+AA+ A+ +AAL L ++LAV+R
Sbjct: 7 RWRMLAILFIARTAMAFQFQMVGALSPLFVTTYGVGLADIGLLVGLYFAPGVVIALPGGSLAARFGDKRLLVLASALMLAGGALALLVDSFAGQIAARVIAGVGGVTLNVIGTKVVADWFAGREIGTAMAIYINSWPVGIALALAVLPGVAALGGLDVALGINAALAALGLGLLLAVFR 185
BLAST of mRNA_P-wetherbeei_contig1662.6.1 vs. uniprot
Match: A0A2V6QUG2_9BACT (MFS domain-containing protein n=2 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V6QUG2_9BACT) HSP 1 Score: 132 bits (333), Expect = 9.450e-34 Identity = 78/179 (43.58%), Postives = 116/179 (64.80%), Query Frame = 1
Query: 1 RWGVLALMFLVGLAAAMQVQSVQALAPLLVARVGLSYAEIGTLTGLFMLPGVFLAMPGGMLAARLGDRRAMAIALSLMLVSSLLFAATESYAVMVVARLVGGSGAAVLTTQGLKVVTDWFAGREISTAMAINAASFGLGIGMATGLLSGIAAVSSWQAAMLASAALIGAALAIVLAVYR 537
RW LA++F+ + Q QSV ++ PLLV +GL++A++G+L GL+MLPG FLA+PGGML RLG+RR + +L+LM+V L+ AA+ S+AV RL+ G GA ++ K+V DWF RE+STAMA+ S+ +G+G+A L +A SSW+ A+ +A L ++ YR
Sbjct: 23 RWVALAIVFVTRTSMGYQFQSVASVGPLLVPELGLTWAQLGSLIGLYMLPGAFLALPGGMLGQRLGERRTVVASLALMVVGGLVTAASHSFAVAAAGRLLSGVGAVLMNILLAKMVADWFTEREMSTAMAVMLTSWPVGLGLAAATLGSLATRSSWRMAIAMTALAAAVGLVLIAFAYR 201
BLAST of mRNA_P-wetherbeei_contig1662.6.1 vs. uniprot
Match: A0A2V7AD43_9BACT (MFS domain-containing protein n=3 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V7AD43_9BACT) HSP 1 Score: 131 bits (330), Expect = 2.830e-33 Identity = 75/179 (41.90%), Postives = 117/179 (65.36%), Query Frame = 1
Query: 1 RWGVLALMFLVGLAAAMQVQSVQALAPLLVARVGLSYAEIGTLTGLFMLPGVFLAMPGGMLAARLGDRRAMAIALSLMLVSSLLFAATESYAVMVVARLVGGSGAAVLTTQGLKVVTDWFAGREISTAMAINAASFGLGIGMATGLLSGIAAVSSWQAAMLASAALIGAALAIVLAVYR 537
RW LA++F+ Q Q++ ++ PL+V +GLS+A++G+L GL+MLPG FLA+PGGML RLG+RR + +L+LM+V ++ AA YA + R++ G GA ++ K+V DWF G +STAMAI S+ +G+G+A + G+A +SW+ A+L +AA+ L ++ VYR
Sbjct: 25 RWVALAIVFVTRTTMGYQFQAIASVGPLIVTDLGLSWAQLGSLIGLYMLPGAFLALPGGMLGQRLGERRTVVASLALMIVGGIITAAAHGYAAALAGRVLAGVGAVLMNVLLAKMVADWFVGGGMSTAMAIMLTSWPVGLGLAAATIGGLATRTSWRTAILITAAVSTLGLLLIAFVYR 203
BLAST of mRNA_P-wetherbeei_contig1662.6.1 vs. uniprot
Match: A0A1Q7Y5A5_9BACT (MFS domain-containing protein n=4 Tax=unclassified Candidatus Rokubacteria TaxID=2760815 RepID=A0A1Q7Y5A5_9BACT) HSP 1 Score: 131 bits (329), Expect = 2.830e-33 Identity = 78/175 (44.57%), Postives = 118/175 (67.43%), Query Frame = 1
Query: 1 RWGVLALMFLVGLAAAMQVQSVQALAPLLVARVGLSYAEIGTLTGLFMLPGVFLAMPGGMLAARLGDRRAMAIALSLMLVSSLLFAATESYAVMVVARLVGGSGAAVLTTQGLKVVTDWFAGREISTAMAINAASFGLGIGMATGLLSGIAAVSSWQAAMLASAALIGAALAIVL 525
RW LA++F+ + Q QSV ++ PLLV +GL++A++GTL G++MLPG F A+PGGML RLG+RR + +L+LM+ L+ AA+ +A+ V RL+ G GA ++ K+V DWFA E++TAMAI +S+ +G+G+A L G+A SSW+ A+ +A + AAL +VL
Sbjct: 3 RWVALAIVFVTRTSMGYQFQSVASVGPLLVPELGLAWAQLGTLIGVYMLPGAFFALPGGMLGQRLGERRTVVASLALMVAGGLVTAASHGFALAVSGRLLSGVGAVLMNILLAKMVADWFAEGELTTAMAIMLSSWPVGLGLAAATLGGVATASSWRMAVATTA--VAAALGLVL 175
BLAST of mRNA_P-wetherbeei_contig1662.6.1 vs. uniprot
Match: A0A2V7BAH7_9BACT (MFS domain-containing protein n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V7BAH7_9BACT) HSP 1 Score: 130 bits (328), Expect = 3.530e-33 Identity = 75/179 (41.90%), Postives = 117/179 (65.36%), Query Frame = 1
Query: 1 RWGVLALMFLVGLAAAMQVQSVQALAPLLVARVGLSYAEIGTLTGLFMLPGVFLAMPGGMLAARLGDRRAMAIALSLMLVSSLLFAATESYAVMVVARLVGGSGAAVLTTQGLKVVTDWFAGREISTAMAINAASFGLGIGMATGLLSGIAAVSSWQAAMLASAALIGAALAIVLAVYR 537
RW LA++F+ + Q QSV ++ PLLV +GL++A++GTL GL+MLPG F A+PGGML R G+RR + +L+LM+ L+ AA+ +AV R++ G+GA ++ K+V DWFA E++TAMA+ +S+ +G+G+A L G+A SSW+ A++A+ L ++ VYR
Sbjct: 4 RWVALAIVFVTRTSMGYQFQSVASVGPLLVPALGLTWAQLGTLIGLYMLPGAFFALPGGMLGQRFGERRTVVASLALMVAGGLVTAASHGFAVAAAGRVLSGAGAVLMNILLAKMVADWFAEGELTTAMAVMLSSWPVGLGLAAATLGGLATRSSWRMAIVATGLAAALGLVLIAFVYR 182 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1662.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1662.6.1 >prot_P-wetherbeei_contig1662.6.1 ID=prot_P-wetherbeei_contig1662.6.1|Name=mRNA_P-wetherbeei_contig1662.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=172bp MFLVGLAAAMQVQSVQALAPLLVARVGLSYAEIGTLTGLFMLPGVFLAMPback to top mRNA from alignment at P-wetherbeei_contig1662:6204..6740+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1662.6.1 ID=mRNA_P-wetherbeei_contig1662.6.1|Name=mRNA_P-wetherbeei_contig1662.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=537bp|location=Sequence derived from alignment at P-wetherbeei_contig1662:6204..6740+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1662:6204..6740+ >mRNA_P-wetherbeei_contig1662.6.1 ID=mRNA_P-wetherbeei_contig1662.6.1|Name=mRNA_P-wetherbeei_contig1662.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=516bp|location=Sequence derived from alignment at P-wetherbeei_contig1662:6204..6740+ (Phaeothamnion wetherbeei SAG_119_79)back to top |