mRNA_P-wetherbeei_contig16572.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig16572.1.1 vs. uniprot
Match: D8LBP0_ECTSI (Expressed protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBP0_ECTSI) HSP 1 Score: 162 bits (409), Expect = 3.850e-45 Identity = 82/114 (71.93%), Postives = 95/114 (83.33%), Query Frame = 1
Query: 28 DVCDDAKLAVVAKGLGPAAVAAGVPAVISAGIWPGVDQIMALEACEMLGGADSVESVDFSAFTAGTGNAGTTILSATFLILCEKVLGYKQGRAVYHESASDFRFVDFGKGVGPR 369
DVCDDA+LA VAK L A AGV A ISAGIWPG+DQ+MA+EACEMLGGA VES+DFSA+TAGTGNAGTTILSATFLILCEKVLG+K G ++HE AS F+ VDFG+ +G +
Sbjct: 179 DVCDDARLATVAKALNEKAQEAGVSATISAGIWPGIDQLMAVEACEMLGGASEVESIDFSAYTAGTGNAGTTILSATFLILCEKVLGFKDGNEIFHEPASGFKKVDFGQSIGEK 292
BLAST of mRNA_P-wetherbeei_contig16572.1.1 vs. uniprot
Match: A0A4D9D814_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D814_9STRA) HSP 1 Score: 137 bits (345), Expect = 4.160e-36 Identity = 69/123 (56.10%), Postives = 90/123 (73.17%), Query Frame = 1
Query: 28 DVCDDAKLAVVAKGLGPAAVAAGVPAVISAGIWPGVDQIMALEACEMLGGADSVESVDFSAFTAGTGNAGTTILSATFLILCEKVLGYKQGRAVYHESASDFRFVDFGKGVGPRQVFRMNIIE 396
DVCDD LA +AKG A VP +IS G+WPG+ +MA++ E +GG ++ + ++F FT+G+G AGTTILSATFLIL EKVL Y GR Y+++ASDFR DFGKG+G RQVFRMN++E
Sbjct: 151 DVCDDIHLAQLAKGYDGEARKGNVPCLISTGVWPGISSLMAVDVAEAVGGIEATDKIEFEFFTSGSGGAGTTILSATFLILSEKVLAYVNGRPHYYDAASDFRKADFGKGIGLRQVFRMNLLE 273
BLAST of mRNA_P-wetherbeei_contig16572.1.1 vs. uniprot
Match: A0A0G4EJV0_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EJV0_VITBC) HSP 1 Score: 137 bits (345), Expect = 7.420e-36 Identity = 69/123 (56.10%), Postives = 93/123 (75.61%), Query Frame = 1
Query: 28 DVCDDAKLAVVAKGLGPAAVAAGVPAVISAGIWPGVDQIMALEACEMLGGADSVESVDFSAFTAGTGNAGTTILSATFLILCEKVLGYKQGRAVYHESASDFRFVDFGKGVGPRQVFRMNIIE 396
DVCDD A++AK + AV+ GV A++S GIWPGV +MALEA E+LGG D VES +FS FTAG+G AG T++SATFLIL EK L Y++G AV++ + S R VDFG+ +G R+V+R+N++E
Sbjct: 172 DVCDDYSAAMMAKQMHEEAVSKGVTAILSGGIWPGVSNLMALEAAELLGGVDKVESTEFSFFTAGSGGAGATLISATFLILAEKALAYEKGEAVHYPAGSGIRSVDFGESIGSRKVYRINLLE 294
BLAST of mRNA_P-wetherbeei_contig16572.1.1 vs. uniprot
Match: K8YW21_NANGC (RRM domain-containing protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YW21_NANGC) HSP 1 Score: 137 bits (345), Expect = 3.680e-35 Identity = 69/123 (56.10%), Postives = 90/123 (73.17%), Query Frame = 1
Query: 28 DVCDDAKLAVVAKGLGPAAVAAGVPAVISAGIWPGVDQIMALEACEMLGGADSVESVDFSAFTAGTGNAGTTILSATFLILCEKVLGYKQGRAVYHESASDFRFVDFGKGVGPRQVFRMNIIE 396
DVCDD LA +AKG A VP +IS G+WPG+ +MA++ E +GG ++ + ++F FT+G+G AGTTILSATFLIL EKVL Y GR Y+++ASDFR DFGKG+G RQVFRMN++E
Sbjct: 131 DVCDDIHLAQLAKGYDGEARKGNVPCLISTGVWPGISSLMAVDVAEAVGGIEATDKIEFEFFTSGSGGAGTTILSATFLILSEKVLAYVNGRPHYYDAASDFRKADFGKGIGLRQVFRMNLLE 253
BLAST of mRNA_P-wetherbeei_contig16572.1.1 vs. uniprot
Match: A0A163YDL2_9SYNE (Putative trans-acting enoyl reductasec n=3 Tax=unclassified Synechococcus TaxID=2626047 RepID=A0A163YDL2_9SYNE) HSP 1 Score: 114 bits (285), Expect = 1.190e-27 Identity = 65/120 (54.17%), Postives = 80/120 (66.67%), Query Frame = 1
Query: 28 DVCDDAKLAVVAKGLGPAAVAAGVPAVISAGIWPGVDQIMALEACEMLGGADSVESVDFSAFTAGTGNAGTTILSATFLILCEKVLGYKQGRAVYHESASDFRFVDFGKGVGPRQVFRMN 387
DVCD+ L+ AK L AVAAGVPAV+S GIWPGV +MA EA + LGG + E V+FS FTAGTG AG TI+SATFL+L +VL Y G + E ++ R VDFG GVG F ++
Sbjct: 116 DVCDEFSLSRHAKDLSGDAVAAGVPAVVSCGIWPGVSALMAAEAVQKLGGPEVCERVEFSFFTAGTGGAGPTIVSATFLLLASRVLNYVNGWLTFKEPWTERRVVDFGAGVGSHACFLLD 235
BLAST of mRNA_P-wetherbeei_contig16572.1.1 vs. uniprot
Match: A0A2D5RBX5_9SYNE (Sacchrp_dh_NADP domain-containing protein n=3 Tax=unclassified Synechococcus TaxID=2626047 RepID=A0A2D5RBX5_9SYNE) HSP 1 Score: 113 bits (282), Expect = 4.330e-27 Identity = 63/120 (52.50%), Postives = 79/120 (65.83%), Query Frame = 1
Query: 28 DVCDDAKLAVVAKGLGPAAVAAGVPAVISAGIWPGVDQIMALEACEMLGGADSVESVDFSAFTAGTGNAGTTILSATFLILCEKVLGYKQGRAVYHESASDFRFVDFGKGVGPRQVFRMN 387
DVCD+ L+ AK L A AAG+PAV+S GIWPGV +MA+EA + LGG +S E ++ S FTAGTG AG TI+SATFL+L KVL Y G E ++ R VDFG GVG F ++
Sbjct: 140 DVCDEFALSRHAKELSSEAAAAGIPAVVSCGIWPGVSALMAIEAAQQLGGPESCERIELSFFTAGTGGAGPTIVSATFLLLATKVLTYLDGSLTLKEPWTERRVVDFGSGVGRHACFLLD 259
BLAST of mRNA_P-wetherbeei_contig16572.1.1 vs. uniprot
Match: A0A164A1T4_9SYNE (Saccharopine dehydrogenase n=3 Tax=unclassified Synechococcus TaxID=2626047 RepID=A0A164A1T4_9SYNE) HSP 1 Score: 112 bits (280), Expect = 6.190e-27 Identity = 62/112 (55.36%), Postives = 76/112 (67.86%), Query Frame = 1
Query: 28 DVCDDAKLAVVAKGLGPAAVAAGVPAVISAGIWPGVDQIMALEACEMLGGADSVESVDFSAFTAGTGNAGTTILSATFLILCEKVLGYKQGRAVYHESASDFRFVDFGKGVG 363
DVCD+ L+ AK L A AAG+PAV+S GIWPGV +MA EA + LGGA S E ++ S FTAGTG AG TI+SATFL+L KVL Y+ G + ++ R VDFG GVG
Sbjct: 115 DVCDEYSLSRHAKDLSGEAAAAGIPAVVSCGIWPGVSALMAAEAVQQLGGASSCERIELSFFTAGTGGAGPTIVSATFLLLATKVLTYRDGMLTLKDPWTERRLVDFGDGVG 226
BLAST of mRNA_P-wetherbeei_contig16572.1.1 vs. uniprot
Match: A0A7S4BYW2_CHRCT (Hypothetical protein (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BYW2_CHRCT) HSP 1 Score: 109 bits (273), Expect = 7.520e-27 Identity = 63/114 (55.26%), Postives = 79/114 (69.30%), Query Frame = 1
Query: 28 DVCDDAKLAVVAKGLGPAAVAAGVPAVISAGIWPGVDQIMALEACEMLGGADSVESVDFSAFTAGTGNAGTTILSATFLILCEKVLGYKQGRAVYHESASDFRFVDFGKGVGPR 369
DVCD+ +L+ V+K L A +AG+PAV+S GIWPG +MA EA E LGG S + +D S FTAGTGNAG TI+SATFL+LC++ L + G V E +D R VDFG GVG R
Sbjct: 122 DVCDEWELSRVSKDLHAEAASAGIPAVVSCGIWPGASALMAAEAVERLGG--SCDELDLSFFTAGTGNAGPTIVSATFLLLCQQALTFSGGVEVMREPWTDDRRVDFGPGVGVR 233
BLAST of mRNA_P-wetherbeei_contig16572.1.1 vs. uniprot
Match: R1DPQ6_EMIHU (Sacchrp_dh_NADP domain-containing protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DPQ6_EMIHU) HSP 1 Score: 108 bits (269), Expect = 2.320e-25 Identity = 62/120 (51.67%), Postives = 77/120 (64.17%), Query Frame = 1
Query: 28 DVCDDAKLAVVAKGLGPAAVAAGVPAVISAGIWPGVDQIMALEACEMLGGADSVESVDFSAFTAGTGNAGTTILSATFLILCEKVLGYKQGRAVYHESASDFRFVDFGKGVGPRQVFRMN 387
DVCD+ +LA AK L A AAGVP V+S GIWPGV +MA EA LGG + E ++FS FTAGTG AG TI+SATFL+L KV Y G V E D + DFG+GVG + + ++
Sbjct: 120 DVCDELQLARNAKALDADAAAAGVPCVVSCGIWPGVSALMAAEAVNKLGGTGACERLEFSFFTAGTGGAGPTIVSATFLLLATKVAMYVDGELVEEEPWLDRQVRDFGEGVGEHECYTLD 239
BLAST of mRNA_P-wetherbeei_contig16572.1.1 vs. uniprot
Match: A0A2E0ANP0_9CYAN (Sacchrp_dh_NADP domain-containing protein n=1 Tax=Cyanobium sp. NAT70 TaxID=2024872 RepID=A0A2E0ANP0_9CYAN) HSP 1 Score: 106 bits (265), Expect = 8.590e-25 Identity = 59/120 (49.17%), Postives = 80/120 (66.67%), Query Frame = 1
Query: 28 DVCDDAKLAVVAKGLGPAAVAAGVPAVISAGIWPGVDQIMALEACEMLGGADSVESVDFSAFTAGTGNAGTTILSATFLILCEKVLGYKQGRAVYHESASDFRFVDFGKGVGPRQVFRMN 387
DVCD+ L AK L A+AAGVPAV+S GIWPGV +MA A E LGG ++ + V+ S FTAGTG AG TI+SATFL+L +V+ G ++ + ++ R VDFG G+G R+ F ++
Sbjct: 113 DVCDELGLTRNAKALSAEAIAAGVPAVVSCGIWPGVSALMAAVAVERLGGPETCDRVELSFFTAGTGGAGPTIVSATFLLLASEVVTVVDGVLMHQQPWTERRVVDFGGGIGERECFLLD 232 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16572.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig16572.1.1 >prot_P-wetherbeei_contig16572.1.1 ID=prot_P-wetherbeei_contig16572.1.1|Name=mRNA_P-wetherbeei_contig16572.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=132bp APAATAAAADVCDDAKLAVVAKGLGPAAVAAGVPAVISAGIWPGVDQIMAback to top mRNA from alignment at P-wetherbeei_contig16572:427..1419+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig16572.1.1 ID=mRNA_P-wetherbeei_contig16572.1.1|Name=mRNA_P-wetherbeei_contig16572.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=993bp|location=Sequence derived from alignment at P-wetherbeei_contig16572:427..1419+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig16572:427..1419+ >mRNA_P-wetherbeei_contig16572.1.1 ID=mRNA_P-wetherbeei_contig16572.1.1|Name=mRNA_P-wetherbeei_contig16572.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=396bp|location=Sequence derived from alignment at P-wetherbeei_contig16572:427..1419+ (Phaeothamnion wetherbeei SAG_119_79)back to top |