prot_P-wetherbeei_contig9667.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig9667.1.1
Unique Nameprot_P-wetherbeei_contig9667.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length190
Homology
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BLAST of mRNA_P-wetherbeei_contig9667.1.1 vs. uniprot
Match: C1MU61_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MU61_MICPC)

HSP 1 Score: 53.5 bits (127), Expect = 5.330e-5
Identity = 24/35 (68.57%), Postives = 26/35 (74.29%), Query Frame = 0 
Query:    4 GCSKKAQPRSTLCRLHGGGRRCQREGCGKVDVGGG 38
            GC+K A   S  CR HGGG+RCQREGCGK D GGG
Sbjct:  412 GCAKHALSGSEHCRAHGGGKRCQREGCGKGDAGGG 446
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9667.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
C1MU61_MICPC5.330e-568.57Predicted protein n=1 Tax=Micromonas pusilla (stra... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR31827:SF1EMB|CAB89363.1coord: 3..107
NoneNo IPR availablePANTHERPTHR31827:SF1EMB|CAB89363.1coord: 43..171
NoneNo IPR availablePANTHERPTHR31827EMB|CAB89363.1coord: 43..171
coord: 3..107

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig9667contigP-wetherbeei_contig9667:11..580 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig9667.1.1mRNA_P-wetherbeei_contig9667.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig9667 11..586 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig9667.1.1 ID=prot_P-wetherbeei_contig9667.1.1|Name=mRNA_P-wetherbeei_contig9667.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=190bp
MKAGCSKKAQPRSTLCRLHGGGRRCQREGCGKVDVGGGLCRSHGGGKRCM
VPSCGKTDVGGGFCMAHGGGKRCQAEGCGKGAQTGGVFCKSHGGGRRCSY
PGCKSSAQSGAQALCIKHGGGKRCSVDGCDNLVRKNGFCARHSAGNRSCG
HAASKSRSATSTAAAASSQSAAATTSASFACPAAVVERVP
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