prot_P-wetherbeei_contig9642.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-wetherbeei_contig9642.1.1
Unique Name	prot_P-wetherbeei_contig9642.1.1
Type	polypeptide
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length	156

Homology

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BLAST of mRNA_P-wetherbeei_contig9642.1.1 vs. uniprot
Match: A0A1J4Z6A4_9PROT (3'-5' exonuclease domain-containing protein n=2 Tax=Hydrogenophilales TaxID=119069 RepID=A0A1J4Z6A4_9PROT)

HSP 1 Score: 213 bits (542), Expect = 1.080e-67
Identity = 104/152 (68.42%), Postives = 121/152 (79.61%), Query Frame = 0

Query:    1 RAVGFDTETRPAFQKGERYLPALAQVATSRAVYLFRLQHMDASRELRELLASPATAKVGIAVADDLRQLKQLFDFEEQRVIDPGDIAYRHGLTQTGLRNLAGIFLGFRIPKGSKTTNWAAQRLTEQQIAYAATDAWACRELFLRFEALGLLA 152
            R VG DTETRPAF+KGE Y PAL QVAT+R VYLFRL  +D +  L ELL +P+  K G+A+ADDLRQLK+ F FE   ++DPG IA RHG+ QTGLRNLA IFLGFRI KG++T+NWAA  LT  QIAYAATDAWACREL+LRF+ LGLLA
Sbjct:   46 RVVGIDTETRPAFRKGESYPPALVQVATARVVYLFRLHQVDCAAALAELLGAPSIVKAGVALADDLRQLKREFQFEPAAILDPGRIARRHGIRQTGLRNLAAIFLGFRITKGARTSNWAAAHLTAAQIAYAATDAWACRELYLRFQTLGLLA 197

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BLAST of mRNA_P-wetherbeei_contig9642.1.1 vs. uniprot
Match: A0A1F3Z8L0_9PROT (3'-5' exonuclease domain-containing protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_67_12 TaxID=1797483 RepID=A0A1F3Z8L0_9PROT)

HSP 1 Score: 207 bits (526), Expect = 3.000e-65
Identity = 104/151 (68.87%), Postives = 121/151 (80.13%), Query Frame = 0

Query:    1 RAVGFDTETRPAFQKGERYLPALAQVATSRAVYLFRLQHMDASRELRELLASPATAKVGIAVADDLRQLKQLFDFEEQRVIDPGDIAYRHGLTQTGLRNLAGIFLGFRIPKGSKTTNWAAQRLTEQQIAYAATDAWACRELFLRFEALGLL 151
            R VG DTETRPAF+KGER+LPAL QVAT+RAVYLF L+ +D SR + ELLA+P   KVG+++A DLRQLK LF   E  V+D G +A  +GL QTGLRNLA IFLGFRIPKG +T+NWAA RL+  QIAYAATDAWACRELFL FE LG+L
Sbjct:   46 RVVGIDTETRPAFRKGERHLPALVQVATARAVYLFPLRRLDFSRAIGELLAAPGIVKVGVSLAHDLRQLKLLFPSVEASVLDAGAVALGYGLRQTGLRNLAAIFLGFRIPKGKRTSNWAASRLSAAQIAYAATDAWACRELFLCFERLGML 196

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BLAST of mRNA_P-wetherbeei_contig9642.1.1 vs. uniprot
Match: A0A2T4TZ34_9BACT (3'-5' exonuclease n=2 Tax=Candidatus Methylomirabilis limnetica TaxID=2033718 RepID=A0A2T4TZ34_9BACT)

HSP 1 Score: 204 bits (519), Expect = 6.140e-64
Identity = 99/149 (66.44%), Postives = 120/149 (80.54%), Query Frame = 0

Query:    3 VGFDTETRPAFQKGERYLPALAQVATSRAVYLFRLQHMDASRELRELLASPATAKVGIAVADDLRQLKQLFDFEEQRVIDPGDIAYRHGLTQTGLRNLAGIFLGFRIPKGSKTTNWAAQRLTEQQIAYAATDAWACRELFLRFEALGLL 151
            VGFD ETRPAF+ GE YLP+L Q AT+ AVYL ++Q  D S  ++E+ +S    K G++VADDLR LK+LF+FEE+ V+D G +A RHGL QTG+RNLAGIFLG RIPKG+KTTNWAA RLT QQIAYAATDAWACREL+LRF+ L L+
Sbjct:   81 VGFDIETRPAFRPGESYLPSLVQFATAGAVYLMQVQQQDYSAVMQEIFSSEKITKAGVSVADDLRNLKKLFEFEERAVVDLGKVAKRHGLKQTGVRNLAGIFLGTRIPKGAKTTNWAAHRLTPQQIAYAATDAWACRELYLRFKQLNLV 229

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BLAST of mRNA_P-wetherbeei_contig9642.1.1 vs. uniprot
Match: A0A1F4BA73_9PROT (3'-5' exonuclease domain-containing protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_67_26 TaxID=1797492 RepID=A0A1F4BA73_9PROT)

HSP 1 Score: 203 bits (516), Expect = 6.550e-64
Identity = 100/153 (65.36%), Postives = 120/153 (78.43%), Query Frame = 0

Query:    1 RAVGFDTETRPAFQKGERYLPALAQVATSRAVYLFRLQHMDASRELRELLASPATAKVGIAVADDLRQLKQLFDFEEQRVIDPGDIAYRHGLTQTGLRNLAGIFLGFRIPKGSKTTNWAAQRLTEQQIAYAATDAWACRELFLRFEALGLLAT 153
            R VG DTETRPAF+KGE +LP L Q AT+RAVYLF+L  +D    L ELLASPA  K G+ +A D+RQLK +F F  + V+D G +A R GL QTG+RNLAG+FLGFRIPKG++T+NWAA RL   QI YAATDAWACREL+LRFEALGLL++
Sbjct:   41 RVVGLDTETRPAFRKGESHLPCLVQAATARAVYLFQLSRLDVFPALVELLASPAVVKAGVGLAHDVRQLKLVFPFTVENVLDLGVVARRRGLGQTGVRNLAGMFLGFRIPKGARTSNWAAPRLAPAQITYAATDAWACRELYLRFEALGLLSS 193

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BLAST of mRNA_P-wetherbeei_contig9642.1.1 vs. uniprot
Match: A0A1F4FA73_9PROT (3'-5' exonuclease domain-containing protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_68_20 TaxID=1797505 RepID=A0A1F4FA73_9PROT)

HSP 1 Score: 202 bits (513), Expect = 2.830e-63
Identity = 98/150 (65.33%), Postives = 121/150 (80.67%), Query Frame = 0

Query:    2 AVGFDTETRPAFQKGERYLPALAQVATSRAVYLFRLQHMDASRELRELLASPATAKVGIAVADDLRQLKQLFDFEEQRVIDPGDIAYRHGLTQTGLRNLAGIFLGFRIPKGSKTTNWAAQRLTEQQIAYAATDAWACRELFLRFEALGLL 151
            A+GFDTETRPAF+KGE +LPALAQ+AT+RAVYLFRLQH D    + E+L+S    K G+ +A DLR+L++LF  +   V+D G  A R G+ QTGLRNLAG+FLGFRIPKG+KT+NWAA+RL+ QQIAYAATDAWACREL+L F  LGL+
Sbjct:   47 ALGFDTETRPAFRKGESHLPALAQLATARAVYLFRLQHQDFGGAIAEILSSQRIVKAGVGLAHDLRELRRLFASQPASVVDLGAAAKRRGVRQTGLRNLAGLFLGFRIPKGTKTSNWAARRLSPQQIAYAATDAWACRELYLEFRRLGLV 196

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BLAST of mRNA_P-wetherbeei_contig9642.1.1 vs. uniprot
Match: A0A1F4EJC6_9PROT (3'-5' exonuclease domain-containing protein n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F4EJC6_9PROT)

HSP 1 Score: 201 bits (512), Expect = 4.150e-63
Identity = 101/152 (66.45%), Postives = 117/152 (76.97%), Query Frame = 0

Query:    3 VGFDTETRPAFQKGERYLPALAQVATSRAVYLFRLQHMDASRELRELLASPATAKVGIAVADDLRQLKQLFDFEEQRVIDPGDIAYRHGLTQTGLRNLAGIFLGFRIPKGSKTTNWAAQRLTEQQIAYAATDAWACRELFLRFEALGLLATH 154
            VGFDTETRP+F+KGE Y P LAQVATSRAVYLF+L+  D S  + ELL +P   KVGI+VA+DLRQLK LF  +   V+D G +A RHGL QTGLRNLA IFLG RIPKG++T+NWAA RL+  QI YAATDAWACRELFL +  LGLL   
Sbjct:   57 VGFDTETRPSFRKGESYPPCLAQVATSRAVYLFQLRQQDFSAAIAELLGAPGITKVGISVAEDLRQLKALFPSQVASVLDAGAVARRHGLRQTGLRNLAAIFLGIRIPKGNRTSNWAAPRLSPAQITYAATDAWACRELFLCYARLGLLGAQ 208

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BLAST of mRNA_P-wetherbeei_contig9642.1.1 vs. uniprot
Match: A0A258TLW4_9PROT (3'-5' exonuclease domain-containing protein n=1 Tax=Hydrogenophilales bacterium 28-61-23 TaxID=1970530 RepID=A0A258TLW4_9PROT)

HSP 1 Score: 199 bits (507), Expect = 3.260e-62
Identity = 98/149 (65.77%), Postives = 115/149 (77.18%), Query Frame = 0

Query:    3 VGFDTETRPAFQKGERYLPALAQVATSRAVYLFRLQHMDASRELRELLASPATAKVGIAVADDLRQLKQLFDFEEQRVIDPGDIAYRHGLTQTGLRNLAGIFLGFRIPKGSKTTNWAAQRLTEQQIAYAATDAWACRELFLRFEALGLL 151
            VGFDTETRPAF KGE +LP L Q+AT+RAVYLF+LQ +D +  L ELLA P   KVG+A+A DLRQL+ LF      V+DPG +A RHG+ QTGLRNLAG+FLGFRI KG +T+NWAA  L+  QI YAATDAWACREL+LR   LGLL
Sbjct:   69 VGFDTETRPAFNKGEHHLPCLVQIATARAVYLFQLQRLDCAEALAELLADPGIVKVGVALAHDLRQLELLFPLAPIAVLDPGIVARRHGIKQTGLRNLAGMFLGFRIAKGMRTSNWAAPNLSAAQIGYAATDAWACRELYLRLLELGLL 217

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BLAST of mRNA_P-wetherbeei_contig9642.1.1 vs. uniprot
Match: A0A537D9Y4_9PROT (3'-5' exonuclease domain-containing protein 2 n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537D9Y4_9PROT)

HSP 1 Score: 198 bits (503), Expect = 6.390e-62
Identity = 96/149 (64.43%), Postives = 118/149 (79.19%), Query Frame = 0

Query:    3 VGFDTETRPAFQKGERYLPALAQVATSRAVYLFRLQHMDASRELRELLASPATAKVGIAVADDLRQLKQLFDFEEQRVIDPGDIAYRHGLTQTGLRNLAGIFLGFRIPKGSKTTNWAAQRLTEQQIAYAATDAWACRELFLRFEALGLL 151
            VG DTETRP+F++GE YLP LAQVAT+RAVYLF LQ +D SREL ELL  P   K G+++A DLRQLK +F FE+  V+D GD+A   G+ Q+G+RNLA  FLGFRIPKG++T+NWAA+ L+  QI YAATDAWACREL+LRF+ L LL
Sbjct:   51 VGLDTETRPSFRRGENYLPCLAQVATARAVYLFPLQRLDCSRELAELLGDPLIVKAGVSLAHDLRQLKLVFPFEQASVVDLGDVARHGGVGQSGVRNLAANFLGFRIPKGNRTSNWAARHLSPAQITYAATDAWACRELYLRFKELQLL 199

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BLAST of mRNA_P-wetherbeei_contig9642.1.1 vs. uniprot
Match: A0A0S8C9S8_9PROT (3'-5' exonuclease domain-containing protein n=1 Tax=Betaproteobacteria bacterium SG8_41 TaxID=1703391 RepID=A0A0S8C9S8_9PROT)

HSP 1 Score: 197 bits (501), Expect = 1.100e-61
Identity = 97/151 (64.24%), Postives = 116/151 (76.82%), Query Frame = 0

Query:    1 RAVGFDTETRPAFQKGERYLPALAQVATSRAVYLFRLQHMDASRELRELLASPATAKVGIAVADDLRQLKQLFDFEEQRVIDPGDIAYRHGLTQTGLRNLAGIFLGFRIPKGSKTTNWAAQRLTEQQIAYAATDAWACRELFLRFEALGLL 151
            R +G DTETRP+F+KGE +LP L Q AT+RAVYLF+L  +D    L ELLA P   K G+ +A DLRQLK +F F  +  +D G +A R GL QTG+RNLAGIFLGFRIPKGS+T+NWAA RL+  QI YAATDAWACRELFLRFE+LG+L
Sbjct:   41 RVLGLDTETRPSFRKGESHLPCLVQAATARAVYLFQLSRLDVFPALVELLAKPDLIKAGVGLAHDLRQLKLVFPFTVENTVDLGVVARRRGLGQTGVRNLAGIFLGFRIPKGSRTSNWAAPRLSPAQITYAATDAWACRELFLRFESLGML 191

[Close]

BLAST of mRNA_P-wetherbeei_contig9642.1.1 vs. uniprot
Match: A0A537BSN3_9PROT (3'-5' exonuclease domain-containing protein 2 n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537BSN3_9PROT)

HSP 1 Score: 196 bits (497), Expect = 4.580e-61
Identity = 97/149 (65.10%), Postives = 117/149 (78.52%), Query Frame = 0

Query:    3 VGFDTETRPAFQKGERYLPALAQVATSRAVYLFRLQHMDASRELRELLASPATAKVGIAVADDLRQLKQLFDFEEQRVIDPGDIAYRHGLTQTGLRNLAGIFLGFRIPKGSKTTNWAAQRLTEQQIAYAATDAWACRELFLRFEALGLL 151
            VG DTETRPAF+KGE +LP L QVAT+RAVYLF LQ MD SR L ELL+ P   K G+++A DLRQLK +F FE   V+D GD A   G++Q+G+RNLA  FLGFRIPKG++T+NWAA+ L+  QI YAATDAWACREL+LRF+ LGLL
Sbjct:   47 VGLDTETRPAFRKGESHLPCLVQVATARAVYLFPLQRMDYSRPLAELLSEPLIVKAGVSLAHDLRQLKLVFPFEPACVVDLGDAARHGGVSQSGVRNLAANFLGFRIPKGNRTSNWAARHLSPAQITYAATDAWACRELYLRFKELGLL 195

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig9642.1.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig9642.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A1J4Z6A4_9PROT	1.080e-67	68.42	3'-5' exonuclease domain-containing protein n=2 Ta...	[more]
A0A1F3Z8L0_9PROT	3.000e-65	68.87	3'-5' exonuclease domain-containing protein n=1 Ta...	[more]
A0A2T4TZ34_9BACT	6.140e-64	66.44	3'-5' exonuclease n=2 Tax=Candidatus Methylomirabi...	[more]
A0A1F4BA73_9PROT	6.550e-64	65.36	3'-5' exonuclease domain-containing protein n=1 Ta...	[more]
A0A1F4FA73_9PROT	2.830e-63	65.33	3'-5' exonuclease domain-containing protein n=1 Ta...	[more]
A0A1F4EJC6_9PROT	4.150e-63	66.45	3'-5' exonuclease domain-containing protein n=2 Ta...	[more]
A0A258TLW4_9PROT	3.260e-62	65.77	3'-5' exonuclease domain-containing protein n=1 Ta...	[more]
A0A537D9Y4_9PROT	6.390e-62	64.43	3'-5' exonuclease domain-containing protein 2 n=1 ...	[more]
A0A0S8C9S8_9PROT	1.100e-61	64.24	3'-5' exonuclease domain-containing protein n=1 Ta...	[more]
A0A537BSN3_9PROT	4.580e-61	65.10	3'-5' exonuclease domain-containing protein 2 n=1 ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002562	3'-5' exonuclease domain	SMART	SM00474	35exoneu6	coord: 2..150 e-value: 8.1E-5 score: 32.0
IPR002562	3'-5' exonuclease domain	PFAM	PF01612	DNA_pol_A_exo1	coord: 2..146 e-value: 3.5E-19 score: 69.2
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 1..149 e-value: 1.0E-35 score: 124.7
None	No IPR available	PANTHER	PTHR13620	3-5 EXONUCLEASE	coord: 3..145
None	No IPR available	CDD	cd06141	WRN_exo	coord: 3..147 e-value: 5.97831E-46 score: 145.799
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 2..147

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig9642	contig	P-wetherbeei_contig9642:1..468 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig9642.1.1	mRNA_P-wetherbeei_contig9642.1.1	Phaeothamnion wetherbeei SAG_119_79	mRNA	P-wetherbeei_contig9642 1..468 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-wetherbeei_contig9642.1.1 ID=prot_P-wetherbeei_contig9642.1.1|Name=mRNA_P-wetherbeei_contig9642.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=156bp
RAVGFDTETRPAFQKGERYLPALAQVATSRAVYLFRLQHMDASRELRELL
ASPATAKVGIAVADDLRQLKQLFDFEEQRVIDPGDIAYRHGLTQTGLRNL
AGIFLGFRIPKGSKTTNWAAQRLTEQQIAYAATDAWACRELFLRFEALGL
LATHG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002562	3'-5'_exonuclease_dom
IPR036397	RNaseH_sf
IPR012337	RNaseH-like_sf