prot_P-wetherbeei_contig9587.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig9587.1.1
Unique Nameprot_P-wetherbeei_contig9587.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length106
Homology
BLAST of mRNA_P-wetherbeei_contig9587.1.1 vs. uniprot
Match: A0A836C8L6_9STRA (Sm-like protein LSm7 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8L6_9STRA)

HSP 1 Score: 155 bits (393), Expect = 2.040e-47
Identity = 79/99 (79.80%), Postives = 87/99 (87.88%), Query Frame = 0
Query:    1 MAERKPKETVLDLTKYLDQAVCVKFVGGREVSGVLKGFDQLVNLVLDESTESIRDPSDPYKMTDEKRHLGLVVCRGTQVSLISPVEGVEEIENPFLAQQ 99
            MAERK KE VLDLTKYLDQ V VKF GGREVSGVLKG+DQLVNLVLD+  E IRDPSDPY++TDE R LGLVVCRGTQVSLISP++G+EEI NPFLA +
Sbjct:    1 MAERK-KENVLDLTKYLDQGVRVKFQGGREVSGVLKGYDQLVNLVLDDCVEFIRDPSDPYRVTDETRTLGLVVCRGTQVSLISPMDGMEEIANPFLAAE 98          
BLAST of mRNA_P-wetherbeei_contig9587.1.1 vs. uniprot
Match: A0A4D9CX90_9STRA (Sm domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CX90_9STRA)

HSP 1 Score: 152 bits (385), Expect = 4.070e-46
Identity = 69/94 (73.40%), Postives = 84/94 (89.36%), Query Frame = 0
Query:    7 KETVLDLTKYLDQAVCVKFVGGREVSGVLKGFDQLVNLVLDESTESIRDPSDPYKMTDEKRHLGLVVCRGTQVSLISPVEGVEEIENPFLAQQE 100
            K+TVLDL KYLD+AVCV+F GGREV+G+L+GFDQL+NLVLDES E++RDP DPY++TDE R LGLV+CRGTQVSLISPVEG EEI NPF+  ++
Sbjct:   10 KDTVLDLNKYLDKAVCVRFQGGREVTGILRGFDQLINLVLDESKETLRDPLDPYRLTDETRELGLVICRGTQVSLISPVEGTEEIANPFIQAED 103          
BLAST of mRNA_P-wetherbeei_contig9587.1.1 vs. uniprot
Match: A0A7S2BSU7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BSU7_9STRA)

HSP 1 Score: 148 bits (374), Expect = 2.470e-44
Identity = 69/94 (73.40%), Postives = 81/94 (86.17%), Query Frame = 0
Query:    7 KETVLDLTKYLDQAVCVKFVGGREVSGVLKGFDQLVNLVLDESTESIRDPSDPYKMTDEKRHLGLVVCRGTQVSLISPVEGVEEIENPFLAQQE 100
            KE++LD+ KY+DQ V VKF GGREV+G LKGFDQLVNLVLD+ TE +RDP DPY++TDE R LG+VVCRGTQVSLISPV+G EEI NPF+AQ E
Sbjct:   18 KESILDINKYIDQGVRVKFQGGREVTGTLKGFDQLVNLVLDDCTEFLRDPEDPYRITDESRTLGMVVCRGTQVSLISPVDGTEEISNPFIAQTE 111          
BLAST of mRNA_P-wetherbeei_contig9587.1.1 vs. uniprot
Match: D8LPU6_ECTSI (Sm-like protein LSm7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPU6_ECTSI)

HSP 1 Score: 146 bits (368), Expect = 1.450e-43
Identity = 74/101 (73.27%), Postives = 84/101 (83.17%), Query Frame = 0
Query:    1 MAE--RKPKETVLDLTKYLDQAVCVKFVGGREVSGVLKGFDQLVNLVLDESTESIRDPSDPYKMTDEKRHLGLVVCRGTQVSLISPVEGVEEIENPFLAQQ 99
            MAE  +K +ETVLDL KYLDQ V VK  GGREV GVLKGFD LVN+VLDE  E IRDP+DPYK+T+E R LGLVVCRGTQVSLISP +G+EEIENPF+A +
Sbjct:    1 MAEVKKKERETVLDLQKYLDQGVRVKLQGGREVHGVLKGFDPLVNVVLDECIEFIRDPTDPYKLTEETRELGLVVCRGTQVSLISPRDGMEEIENPFMAPE 101          
BLAST of mRNA_P-wetherbeei_contig9587.1.1 vs. uniprot
Match: A0A7S2CML5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CML5_9STRA)

HSP 1 Score: 146 bits (369), Expect = 1.830e-43
Identity = 68/100 (68.00%), Postives = 83/100 (83.00%), Query Frame = 0
Query:    1 MAERKPKETVLDLTKYLDQAVCVKFVGGREVSGVLKGFDQLVNLVLDESTESIRDPSDPYKMTDEKRHLGLVVCRGTQVSLISPVEGVEEIENPFLAQQE 100
            MA+   KE++LDL KY+DQ V VKF GGREV G+LKG+DQLVNLVLDE  E +RDP DPY++TD+ R LG+VVCRGTQVSLISP++G EEI NPF+A +E
Sbjct:   22 MAQASKKESILDLNKYVDQGVRVKFQGGREVQGILKGYDQLVNLVLDECVEYLRDPDDPYRITDDTRTLGMVVCRGTQVSLISPMDGTEEIANPFVAAEE 121          
BLAST of mRNA_P-wetherbeei_contig9587.1.1 vs. uniprot
Match: A0A7S2XWT1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWT1_9STRA)

HSP 1 Score: 144 bits (362), Expect = 1.230e-42
Identity = 73/104 (70.19%), Postives = 84/104 (80.77%), Query Frame = 0
Query:    1 MAERKPKETVLDLTKYLDQAVCVKFVGGREVSGVLKGFDQLVNLVLDESTESIRDPSDPYKMTDEKRHLGLVVCRGTQVSLISPVEGVEEIENPFLAQQEGDEG 104
            MA    +E VLDL KY+DQ V VKF GGREV G+LKGFDQLVNLVLDE+ E +RDP DPY++T+E R LGLVVCRG QVSLISPV+G+EEI NPFL Q E +EG
Sbjct:    1 MATGGKRENVLDLNKYVDQGVRVKFQGGREVHGILKGFDQLVNLVLDETVEFLRDPDDPYRITNETRTLGLVVCRGPQVSLISPVDGMEEIANPFL-QMEEEEG 103          
BLAST of mRNA_P-wetherbeei_contig9587.1.1 vs. uniprot
Match: A0A7I8VD05_9ANNE (DgyrCDS1623 n=1 Tax=Dimorphilus gyrociliatus TaxID=2664684 RepID=A0A7I8VD05_9ANNE)

HSP 1 Score: 142 bits (358), Expect = 6.560e-42
Identity = 68/98 (69.39%), Postives = 79/98 (80.61%), Query Frame = 0
Query:    2 AERKPKETVLDLTKYLDQAVCVKFVGGREVSGVLKGFDQLVNLVLDESTESIRDPSDPYKMTDEKRHLGLVVCRGTQVSLISPVEGVEEIENPFLAQQ 99
            AERK KET+LDL KYLD+ + VKF GGRE SGVLKGFD L+NLVLD +TE +RDP DPYK+T++ R LGL VCRGT V LI P EG+E I NPFLAQ+
Sbjct:   12 AERKRKETILDLGKYLDKIIRVKFAGGREASGVLKGFDPLLNLVLDGTTEHLRDPDDPYKITNDTRQLGLTVCRGTAVLLICPAEGMESIANPFLAQE 109          
BLAST of mRNA_P-wetherbeei_contig9587.1.1 vs. uniprot
Match: A0A7S2ST35_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2ST35_9STRA)

HSP 1 Score: 140 bits (354), Expect = 1.800e-41
Identity = 66/94 (70.21%), Postives = 80/94 (85.11%), Query Frame = 0
Query:    7 KETVLDLTKYLDQAVCVKFVGGREVSGVLKGFDQLVNLVLDESTESIRDPSDPYKMTDEKRHLGLVVCRGTQVSLISPVEGVEEIENPFLAQQE 100
            KE++LDL KY+DQ V VKF GGREV GVLKG+DQLVNLVLDE+ E +RDP DPY++T++ R LG+VVCRGTQVSLISP++G EEI NPFL  +E
Sbjct:    6 KESILDLGKYIDQGVRVKFQGGREVHGVLKGYDQLVNLVLDEAVEYLRDPEDPYRITEQTRTLGMVVCRGTQVSLISPMDGTEEIANPFLQVEE 99          
BLAST of mRNA_P-wetherbeei_contig9587.1.1 vs. uniprot
Match: A0A6A4WL24_AMPAM (U6 snRNA-associated Sm-like protein LSm7 n=3 Tax=Thoracicalcarea TaxID=2899756 RepID=A0A6A4WL24_AMPAM)

HSP 1 Score: 140 bits (354), Expect = 2.510e-41
Identity = 67/99 (67.68%), Postives = 82/99 (82.83%), Query Frame = 0
Query:    3 ERKPKETVLDLTKYLDQAVCVKFVGGREVSGVLKGFDQLVNLVLDESTESIRDPSDPYKMTDEKRHLGLVVCRGTQVSLISPVEGVEEIENPFLAQQEG 101
            ERK KE++LDL+KYLD+ + VKF GGRE SG+LKGFDQL+NLVLD +TE +RDP DPY++TD+ R LGLVVCRGT V LI P +G+E I NPF+ QQEG
Sbjct:   13 ERKKKESILDLSKYLDKPIRVKFSGGRESSGILKGFDQLLNLVLDNTTEHLRDPDDPYRLTDDTRQLGLVVCRGTAVVLICPADGMEAIPNPFV-QQEG 110          
BLAST of mRNA_P-wetherbeei_contig9587.1.1 vs. uniprot
Match: A0A444TJV0_ARMVU (U6 snRNA-associated Sm-like protein LSm7 n=2 Tax=Armadillidium TaxID=13346 RepID=A0A444TJV0_ARMVU)

HSP 1 Score: 139 bits (349), Expect = 2.290e-40
Identity = 63/97 (64.95%), Postives = 80/97 (82.47%), Query Frame = 0
Query:    3 ERKPKETVLDLTKYLDQAVCVKFVGGREVSGVLKGFDQLVNLVLDESTESIRDPSDPYKMTDEKRHLGLVVCRGTQVSLISPVEGVEEIENPFLAQQ 99
            E+K KE++LDL KYLD+A+ VKF GGRE SG+LKGFDQL+NLVLD + E +RDP DPYK+TD+ +  GLVVCRGT V LI P++G E+I NPF+AQ+
Sbjct:   29 EKKKKESILDLRKYLDKAIRVKFSGGREASGILKGFDQLLNLVLDNTIEYLRDPDDPYKLTDDTKERGLVVCRGTAVVLICPMDGCEQIANPFIAQE 125          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9587.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836C8L6_9STRA2.040e-4779.80Sm-like protein LSm7 n=1 Tax=Tribonema minus TaxID... [more]
A0A4D9CX90_9STRA4.070e-4673.40Sm domain-containing protein n=1 Tax=Nannochlorops... [more]
A0A7S2BSU7_9STRA2.470e-4473.40Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
D8LPU6_ECTSI1.450e-4373.27Sm-like protein LSm7 n=2 Tax=Ectocarpus TaxID=2879... [more]
A0A7S2CML5_9STRA1.830e-4368.00Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2XWT1_9STRA1.230e-4270.19Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7I8VD05_9ANNE6.560e-4269.39DgyrCDS1623 n=1 Tax=Dimorphilus gyrociliatus TaxID... [more]
A0A7S2ST35_9STRA1.800e-4170.21Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A6A4WL24_AMPAM2.510e-4167.68U6 snRNA-associated Sm-like protein LSm7 n=3 Tax=T... [more]
A0A444TJV0_ARMVU2.290e-4064.95U6 snRNA-associated Sm-like protein LSm7 n=2 Tax=A... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001163LSM domain, eukaryotic/archaea-typeSMARTSM00651Sm3coord: 11..84
e-value: 2.0E-19
score: 80.5
IPR001163LSM domain, eukaryotic/archaea-typePFAMPF01423LSMcoord: 12..84
e-value: 1.7E-19
score: 69.2
NoneNo IPR availablePIRSFPIRSF037188Lsm7coord: 1..100
e-value: 4.9E-44
score: 146.8
NoneNo IPR availableGENE3D2.30.30.100coord: 1..94
e-value: 3.2E-30
score: 106.1
NoneNo IPR availablePANTHERPTHR10553:SF30BNAA06G33630D PROTEINcoord: 7..95
IPR044641Sm-like protein Lsm7/SmGPANTHERPTHR10553SMALL NUCLEAR RIBONUCLEOPROTEINcoord: 7..95
IPR017132Sm-like protein Lsm7CDDcd01729LSm7coord: 7..95
e-value: 9.73493E-54
score: 160.829
IPR010920LSM domain superfamilySUPERFAMILY50182Sm-like ribonucleoproteinscoord: 13..88

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig9587contigP-wetherbeei_contig9587:251..728 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig9587.1.1mRNA_P-wetherbeei_contig9587.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig9587 8..756 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig9587.1.1 ID=prot_P-wetherbeei_contig9587.1.1|Name=mRNA_P-wetherbeei_contig9587.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=106bp
MAERKPKETVLDLTKYLDQAVCVKFVGGREVSGVLKGFDQLVNLVLDEST
ESIRDPSDPYKMTDEKRHLGLVVCRGTQVSLISPVEGVEEIENPFLAQQE
GDEGT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001163LSM_dom_euk/arc
IPR044641Lsm7/SmG-like
IPR017132Lsm7
IPR010920LSM_dom_sf