prot_P-wetherbeei_contig9584.4.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig9584.4.1
Unique Nameprot_P-wetherbeei_contig9584.4.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length94
Homology
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BLAST of mRNA_P-wetherbeei_contig9584.4.1 vs. uniprot
Match: F8C0T3_AFIC5 (Uncharacterized protein n=1 Tax=Afipia carboxidovorans (strain ATCC 49405 / DSM 1227 / KCTC 32145 / OM5) TaxID=504832 RepID=F8C0T3_AFIC5)

HSP 1 Score: 53.5 bits (127), Expect = 2.060e-7
Identity = 35/81 (43.21%), Postives = 45/81 (55.56%), Query Frame = 0 
Query:   11 LLRKIEPIVRRSSFTNKDAVTQGNNTGRLATSDAMLNHLAMLQNERPGDSARIRNAYLAICFAIQARIDLLFTMSEIPQTA 91
            +LRKI+P+  RSS  NKD  T   +    A          M+    P    +I + +LA+ F IQARIDLLFTMS+IPQ A
Sbjct:    1 MLRKIDPMAMRSSVANKDHFTTRTSCDARAPK--------MIWRYAP----KIHDTHLAMRFMIQARIDLLFTMSDIPQAA 69
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9584.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
F8C0T3_AFIC52.060e-743.21Uncharacterized protein n=1 Tax=Afipia carboxidovo... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig9584contigP-wetherbeei_contig9584:1096..1377 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig9584.4.1mRNA_P-wetherbeei_contig9584.4.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig9584 1096..1377 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig9584.4.1 ID=prot_P-wetherbeei_contig9584.4.1|Name=mRNA_P-wetherbeei_contig9584.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=94bp
MQLDMIRKTSLLRKIEPIVRRSSFTNKDAVTQGNNTGRLATSDAMLNHLA
MLQNERPGDSARIRNAYLAICFAIQARIDLLFTMSEIPQTAFW*
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