prot_P-wetherbeei_contig8816.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig8816.1.1
Unique Nameprot_P-wetherbeei_contig8816.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length79
Homology
BLAST of mRNA_P-wetherbeei_contig8816.1.1 vs. uniprot
Match: A0A7S2DRZ5_9STRA (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DRZ5_9STRA)

HSP 1 Score: 136 bits (342), Expect = 2.260e-39
Identity = 56/77 (72.73%), Postives = 65/77 (84.42%), Query Frame = 0
Query:    1 LAGLTVGAPRRVCQYAFKLYDIVWICKSCQADETCVLCNECFIPALHENHEVFFYHAQAGGCCDCGDPDAWSPAGFC 77
            L+ L+  APR+VCQYAF+  DIVWIC++CQADETCVLCN CF  + HE HEV+FYHAQAGGCCDCGDPDAW+  GFC
Sbjct:    1 LSDLSKRAPRQVCQYAFRKNDIVWICRTCQADETCVLCNACFRDSSHEGHEVYFYHAQAGGCCDCGDPDAWAADGFC 77          
BLAST of mRNA_P-wetherbeei_contig8816.1.1 vs. uniprot
Match: D7G2M8_ECTSI (E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2M8_ECTSI)

HSP 1 Score: 137 bits (345), Expect = 6.790e-36
Identity = 57/76 (75.00%), Postives = 61/76 (80.26%), Query Frame = 0
Query:    4 LTVGAPRRVCQYAFKLYDIVWICKSCQADETCVLCNECFIPALHENHEVFFYHAQAGGCCDCGDPDAWSPAGFCRY 79
            L    PRRVCQYAF   DIVWICK CQADETCVLCN+CF  + HE HEV+FYHAQAGGCCDCGDPDAW   GFCR+
Sbjct:  202 LPADTPRRVCQYAFLKNDIVWICKECQADETCVLCNDCFRSSDHEGHEVYFYHAQAGGCCDCGDPDAWDYRGFCRH 277          
BLAST of mRNA_P-wetherbeei_contig8816.1.1 vs. uniprot
Match: A0A7R9VHK1_9STRA (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VHK1_9STRA)

HSP 1 Score: 128 bits (322), Expect = 1.400e-35
Identity = 52/76 (68.42%), Postives = 64/76 (84.21%), Query Frame = 0
Query:    4 LTVGA--PRRVCQYAFKLYDIVWICKSCQADETCVLCNECFIPALHENHEVFFYHAQAGGCCDCGDPDAWSPAGFC 77
            L++G+  PRRVCQ+ FK  DIVW+C++CQ+DETCVLC+ C+  + HE H+V FYHAQAGGCCDCGDPDAW PAGFC
Sbjct:  122 LSLGSLIPRRVCQHPFKRNDIVWVCRTCQSDETCVLCHACYSQSDHEGHDVAFYHAQAGGCCDCGDPDAWDPAGFC 197          
BLAST of mRNA_P-wetherbeei_contig8816.1.1 vs. uniprot
Match: A0A6H5JTE4_9PHAE (E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTE4_9PHAE)

HSP 1 Score: 134 bits (338), Expect = 5.960e-35
Identity = 56/76 (73.68%), Postives = 60/76 (78.95%), Query Frame = 0
Query:    4 LTVGAPRRVCQYAFKLYDIVWICKSCQADETCVLCNECFIPALHENHEVFFYHAQAGGCCDCGDPDAWSPAGFCRY 79
            L    PRRVCQYAF   DIVWICK CQADETCVLCN+CF  + HE HEV+FYHAQAGGCCDCGDPDAW   GFC +
Sbjct:  203 LPADTPRRVCQYAFLKNDIVWICKDCQADETCVLCNDCFRSSDHEGHEVYFYHAQAGGCCDCGDPDAWDYRGFCPH 278          
BLAST of mRNA_P-wetherbeei_contig8816.1.1 vs. uniprot
Match: A0A7S1XL72_9STRA (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XL72_9STRA)

HSP 1 Score: 132 bits (332), Expect = 1.190e-34
Identity = 55/70 (78.57%), Postives = 60/70 (85.71%), Query Frame = 0
Query:    8 APRRVCQYAFKLYDIVWICKSCQADETCVLCNECFIPALHENHEVFFYHAQAGGCCDCGDPDAWSPAGFC 77
            + RRVCQYAFK  DIVWICK CQADETCVLCN+CFI + HE HEV+FYHAQAGGCCDCGD  AW+PAG C
Sbjct:  114 SERRVCQYAFKRNDIVWICKECQADETCVLCNDCFIDSEHEGHEVYFYHAQAGGCCDCGDQYAWNPAGCC 183          
BLAST of mRNA_P-wetherbeei_contig8816.1.1 vs. uniprot
Match: A0A7S3L202_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L202_9STRA)

HSP 1 Score: 130 bits (328), Expect = 1.270e-34
Identity = 51/73 (69.86%), Postives = 60/73 (82.19%), Query Frame = 0
Query:    7 GAPRRVCQYAFKLYDIVWICKSCQADETCVLCNECFIPALHENHEVFFYHAQAGGCCDCGDPDAWSPAGFCRY 79
              PRRVCQ+ F+  DIVW+C++CQADETCVLC+ CF  + HE H+V FYHAQAGGCCDCGDPDAW PAGFC +
Sbjct:  182 AVPRRVCQHPFRKNDIVWVCRTCQADETCVLCHACFSQSHHEGHDVAFYHAQAGGCCDCGDPDAWDPAGFCPH 254          
BLAST of mRNA_P-wetherbeei_contig8816.1.1 vs. uniprot
Match: A0A7S3KZJ0_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3KZJ0_9STRA)

HSP 1 Score: 130 bits (328), Expect = 1.340e-33
Identity = 51/73 (69.86%), Postives = 60/73 (82.19%), Query Frame = 0
Query:    7 GAPRRVCQYAFKLYDIVWICKSCQADETCVLCNECFIPALHENHEVFFYHAQAGGCCDCGDPDAWSPAGFCRY 79
              PRRVCQ+ F+  DIVW+C++CQADETCVLC+ CF  + HE H+V FYHAQAGGCCDCGDPDAW PAGFC +
Sbjct:  182 AVPRRVCQHPFRKNDIVWVCRTCQADETCVLCHACFSQSHHEGHDVAFYHAQAGGCCDCGDPDAWDPAGFCPH 254          
BLAST of mRNA_P-wetherbeei_contig8816.1.1 vs. uniprot
Match: B8C4U6_THAPS (E3 ubiquitin-protein ligase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C4U6_THAPS)

HSP 1 Score: 130 bits (328), Expect = 1.340e-33
Identity = 52/77 (67.53%), Postives = 63/77 (81.82%), Query Frame = 0
Query:    1 LAGLTVGAPRRVCQYAFKLYDIVWICKSCQADETCVLCNECFIPALHENHEVFFYHAQAGGCCDCGDPDAWSPAGFC 77
            +A L +  PRRVCQ+ FK  DIVW+C++CQ+DETCVLC++CF  + HE H+V FYHAQAGGCCDCGD DAW PAGFC
Sbjct:  501 IASLGLSIPRRVCQHPFKRNDIVWVCRTCQSDETCVLCHDCFSHSNHEGHDVAFYHAQAGGCCDCGDADAWDPAGFC 577          
BLAST of mRNA_P-wetherbeei_contig8816.1.1 vs. uniprot
Match: A0A7S2Y701_9STRA (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y701_9STRA)

HSP 1 Score: 129 bits (324), Expect = 2.460e-33
Identity = 50/71 (70.42%), Postives = 60/71 (84.51%), Query Frame = 0
Query:    9 PRRVCQYAFKLYDIVWICKSCQADETCVLCNECFIPALHENHEVFFYHAQAGGCCDCGDPDAWSPAGFCRY 79
            PRRVCQ+ F+  DIVW+C++CQADETCVLC+ C+  + HE H+V FYHAQAGGCCDCGDPDAW PAGFC +
Sbjct:  122 PRRVCQHPFRKNDIVWVCRTCQADETCVLCHNCYSQSDHEGHDVAFYHAQAGGCCDCGDPDAWDPAGFCPH 192          
BLAST of mRNA_P-wetherbeei_contig8816.1.1 vs. uniprot
Match: A0A448Z6T2_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z6T2_9STRA)

HSP 1 Score: 130 bits (326), Expect = 2.490e-33
Identity = 53/77 (68.83%), Postives = 62/77 (80.52%), Query Frame = 0
Query:    1 LAGLTVGAPRRVCQYAFKLYDIVWICKSCQADETCVLCNECFIPALHENHEVFFYHAQAGGCCDCGDPDAWSPAGFC 77
            L  L+   PRRVCQ+ FK  DIVW+C++CQADETCVLC+ C+  + HE H+V FYHAQAGGCCDCGDPDAW PAGFC
Sbjct:  239 LESLSRTVPRRVCQHPFKKNDIVWVCRTCQADETCVLCHACYKGSDHEGHDVAFYHAQAGGCCDCGDPDAWDPAGFC 315          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8816.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2DRZ5_9STRA2.260e-3972.73E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Dic... [more]
D7G2M8_ECTSI6.790e-3675.00E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus sil... [more]
A0A7R9VHK1_9STRA1.400e-3568.42E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Pse... [more]
A0A6H5JTE4_9PHAE5.960e-3573.68E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus sp.... [more]
A0A7S1XL72_9STRA1.190e-3478.57E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Pha... [more]
A0A7S3L202_9STRA1.270e-3469.86E3 ubiquitin-protein ligase n=1 Tax=Amphora coffei... [more]
A0A7S3KZJ0_9STRA1.340e-3369.86E3 ubiquitin-protein ligase n=1 Tax=Amphora coffei... [more]
B8C4U6_THAPS1.340e-3367.53E3 ubiquitin-protein ligase n=1 Tax=Thalassiosira ... [more]
A0A7S2Y701_9STRA2.460e-3370.42E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Amp... [more]
A0A448Z6T2_9STRA2.490e-3368.83E3 ubiquitin-protein ligase n=1 Tax=Pseudo-nitzsch... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003126Zinc finger, UBR-typeSMARTSM00396push_1coord: 11..79
e-value: 4.7E-11
score: 52.7
IPR003126Zinc finger, UBR-typePFAMPF02207zf-UBRcoord: 12..78
e-value: 2.4E-18
score: 65.9
IPR003126Zinc finger, UBR-typePROSITEPS51157ZF_UBRcoord: 11..79
score: 9.787562
NoneNo IPR availableGENE3D2.10.110.30coord: 13..79
e-value: 9.8E-21
score: 75.5
NoneNo IPR availablePANTHERPTHR21497:SF24E3 UBIQUITIN-PROTEIN LIGASE UBR1coord: 9..78
IPR039164E3 ubiquitin-protein ligase UBR1-likePANTHERPTHR21497UBIQUITIN LIGASE E3 ALPHA-RELATEDcoord: 9..78

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8816contigP-wetherbeei_contig8816:114..592 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8816.1.1mRNA_P-wetherbeei_contig8816.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig8816 114..592 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig8816.1.1 ID=prot_P-wetherbeei_contig8816.1.1|Name=mRNA_P-wetherbeei_contig8816.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=79bp
LAGLTVGAPRRVCQYAFKLYDIVWICKSCQADETCVLCNECFIPALHENH
EVFFYHAQAGGCCDCGDPDAWSPAGFCRY
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003126Znf_UBR
IPR039164UBR1-like