prot_P-wetherbeei_contig8563.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig8563.2.1
Unique Nameprot_P-wetherbeei_contig8563.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length112
Homology
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BLAST of mRNA_P-wetherbeei_contig8563.2.1 vs. uniprot
Match: A0A3C0TXY5_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TXY5_9PROT)

HSP 1 Score: 100 bits (250), Expect = 1.860e-25
Identity = 60/110 (54.55%), Postives = 70/110 (63.64%), Query Frame = 0 
Query:    1 MSNITNIAVSGIRAAGVRFAAHAENIANTNSTGYTALRPEQISTAAGPVVRVTRPDKARPNAQQSENAAPSDVDLASEFAHLIALKYDYKAAVKLLRAADEVSGKLLDIL 110
            MS+  NI +SG+RAA  RFA  AENIAN   +GY   R EQ+STA GPVVRV+R +K R   Q  E      V+LA E A LIA K DYK A+ +LR   EV G LLDIL
Sbjct:    1 MSSALNITLSGLRAAETRFAVRAENIANAGVSGYAPQRAEQVSTATGPVVRVSRTEKPRQERQNEEA-----VNLAEEIAGLIAAKQDYKTAIAVLRIEQEVRGALLDIL 105
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BLAST of mRNA_P-wetherbeei_contig8563.2.1 vs. uniprot
Match: A0A2N6EUW1_9DELT (Flagellar biosynthesis protein FlgC n=1 Tax=Desulfuromonas sp. TaxID=892 RepID=A0A2N6EUW1_9DELT)

HSP 1 Score: 55.5 bits (132), Expect = 1.410e-7
Identity = 37/102 (36.27%), Postives = 56/102 (54.90%), Query Frame = 0 
Query:    8 AVSGIRAAGVRFAAHAENIANTNSTGYTALRPEQISTAAGPV-VRVTRPDKARPNAQQSENAAPSDVDLASEFAHLIALKYDYKAAVKLLRAADEVSGKLLD 108
            AVSG++A  +R  + A N+AN+ + GYT           G V  ++ +P  A  ++Q  EN A S VDLA E  +++  K  Y A +K +  AD ++G LLD
Sbjct:   10 AVSGLQAQSLRLNSTANNVANSQTEGYTPSTVTMTEAEQGGVRAQLQKPVTANDSSQSVENPA-SKVDLAKEMVNMMQTKQFYSANLKTVSVADSMTGDLLD 110
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BLAST of mRNA_P-wetherbeei_contig8563.2.1 vs. uniprot
Match: A0A514EE08_XANCT (Flg_bb_rod domain-containing protein n=1 Tax=Xanthomonas translucens pv. cerealis TaxID=152263 RepID=A0A514EE08_XANCT)

HSP 1 Score: 50.1 bits (118), Expect = 1.350e-5
Identity = 35/111 (31.53%), Postives = 55/111 (49.55%), Query Frame = 0 
Query:    1 MSNITNIAVSGIRAAGVRFAAHAENIANTNSTGYTALRPEQISTAAGPVVRVTRPDKARPNAQQSENAAPSDVDLASEFAHLIALKYDYKAAVKLLRAADEVSGKLLDILS 111
            ++++ +IA+SG+RAA     A A NIAN  + G+         TA G VV             Q   A     DL  +    ++ + D++A  ++LRAAD+  G LLD+L+
Sbjct:    4 IASVPSIALSGMRAAASGLQARANNIANAATEGFQRQVTANQETAGGGVVA------------QVTAAGGEGSDLVDDMVGGLSARNDFQANARVLRAADDTVGSLLDVLA 102
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8563.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A3C0TXY5_9PROT1.860e-2554.55Uncharacterized protein n=1 Tax=Alphaproteobacteri... [more]
A0A2N6EUW1_9DELT1.410e-736.27Flagellar biosynthesis protein FlgC n=1 Tax=Desulf... [more]
A0A514EE08_XANCT1.350e-531.53Flg_bb_rod domain-containing protein n=1 Tax=Xanth... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010930Flagellar basal-body/hook protein, C-terminal domainPFAMPF06429Flg_bbr_Ccoord: 67..108
e-value: 1.9E-5
score: 24.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8563contigP-wetherbeei_contig8563:864..1199 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8563.2.1mRNA_P-wetherbeei_contig8563.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig8563 855..1199 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig8563.2.1 ID=prot_P-wetherbeei_contig8563.2.1|Name=mRNA_P-wetherbeei_contig8563.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=112bp
MSNITNIAVSGIRAAGVRFAAHAENIANTNSTGYTALRPEQISTAAGPVV
RVTRPDKARPNAQQSENAAPSDVDLASEFAHLIALKYDYKAAVKLLRAAD
EVSGKLLDILS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010930Flg_bb/hook_C_dom