prot_P-wetherbeei_contig8510.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig8510.2.1
Unique Nameprot_P-wetherbeei_contig8510.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length74
Homology
BLAST of mRNA_P-wetherbeei_contig8510.2.1 vs. uniprot
Match: D8LHW4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHW4_ECTSI)

HSP 1 Score: 120 bits (302), Expect = 3.500e-30
Identity = 58/74 (78.38%), Postives = 67/74 (90.54%), Query Frame = 0
Query:    1 METLNRIQSKMCDAALLGSENLLLCAPTGAGKTNVAMLAMLHEIGQRRRDDGTIDLDAFKVVYVAPMKTLVEEV 74
            ME LNRIQSKM +AALL  ENLLLCAPTGAGKTNVA++ MLHEIGQ R++DGTID+D+FK+VYVAPMK LV+EV
Sbjct:  525 MEKLNRIQSKMQEAALLSPENLLLCAPTGAGKTNVALMTMLHEIGQHRKEDGTIDVDSFKIVYVAPMKALVQEV 598          
BLAST of mRNA_P-wetherbeei_contig8510.2.1 vs. uniprot
Match: K8YVZ6_NANGC (Pre-mRNA-splicing helicase BRR2 n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YVZ6_NANGC)

HSP 1 Score: 116 bits (290), Expect = 1.460e-28
Identity = 55/73 (75.34%), Postives = 64/73 (87.67%), Query Frame = 0
Query:    1 METLNRIQSKMCDAALLGSENLLLCAPTGAGKTNVAMLAMLHEIGQRRRDDGTIDLDAFKVVYVAPMKTLVEE 73
            M  LNR+QSKMC +AL  SENLLLCAPTGAGKTNVAML +L+EIGQ  R+DG++DLDAFK+VYVAPMK LV+E
Sbjct:   72 MTMLNRVQSKMCSSALYSSENLLLCAPTGAGKTNVAMLCILNEIGQHLREDGSVDLDAFKIVYVAPMKALVQE 144          
BLAST of mRNA_P-wetherbeei_contig8510.2.1 vs. uniprot
Match: W7TFU8_9STRA (U5 small nuclear ribonucleoprotein helicase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TFU8_9STRA)

HSP 1 Score: 116 bits (290), Expect = 1.460e-28
Identity = 55/73 (75.34%), Postives = 64/73 (87.67%), Query Frame = 0
Query:    1 METLNRIQSKMCDAALLGSENLLLCAPTGAGKTNVAMLAMLHEIGQRRRDDGTIDLDAFKVVYVAPMKTLVEE 73
            M  LNR+QSKMC +AL  SENLLLCAPTGAGKTNVAML +L+EIGQ  R+DG++DLDAFK+VYVAPMK LV+E
Sbjct:  511 MTMLNRVQSKMCSSALYSSENLLLCAPTGAGKTNVAMLCILNEIGQHLREDGSVDLDAFKIVYVAPMKALVQE 583          
BLAST of mRNA_P-wetherbeei_contig8510.2.1 vs. uniprot
Match: A0A2P6V4J1_9CHLO (U5 small nuclear ribonucleo 200 kDa helicase-like n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V4J1_9CHLO)

HSP 1 Score: 114 bits (286), Expect = 5.070e-28
Identity = 54/73 (73.97%), Postives = 62/73 (84.93%), Query Frame = 0
Query:    1 METLNRIQSKMCDAALLGSENLLLCAPTGAGKTNVAMLAMLHEIGQRRRDDGTIDLDAFKVVYVAPMKTLVEE 73
            M+ LNRIQS++CD AL  SEN+L+CAPTGAGKTNVAML MLHEIG  RRDDG+ID  AFK++YVAPMK LV E
Sbjct:  488 MKALNRIQSRVCDCALYSSENMLVCAPTGAGKTNVAMLTMLHEIGLHRRDDGSIDTAAFKIIYVAPMKALVAE 560          
BLAST of mRNA_P-wetherbeei_contig8510.2.1 vs. uniprot
Match: E1Z6L6_CHLVA (Uncharacterized protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1Z6L6_CHLVA)

HSP 1 Score: 114 bits (284), Expect = 9.410e-28
Identity = 53/73 (72.60%), Postives = 64/73 (87.67%), Query Frame = 0
Query:    1 METLNRIQSKMCDAALLGSENLLLCAPTGAGKTNVAMLAMLHEIGQRRRDDGTIDLDAFKVVYVAPMKTLVEE 73
            M++LNRIQS++CD AL  +EN+L+CAPTGAGKTNVAMLAMLHEIG  RR+DG+ID  AFK++YVAPMK LV E
Sbjct:  241 MKSLNRIQSRVCDTALYSAENMLVCAPTGAGKTNVAMLAMLHEIGLHRREDGSIDTAAFKIIYVAPMKALVAE 313          
BLAST of mRNA_P-wetherbeei_contig8510.2.1 vs. uniprot
Match: A0A7S3Y2E0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y2E0_HETAK)

HSP 1 Score: 107 bits (267), Expect = 4.440e-27
Identity = 53/74 (71.62%), Postives = 61/74 (82.43%), Query Frame = 0
Query:    1 METLNRIQSKMCDAALLGSENLLLCAPTGAGKTNVAMLAMLHEIGQRRRDDGTIDLDAFKVVYVAPMKTLVEEV 74
            M TLNR+QSKM  AA     NLLLCAPTGAGKTNVAML ML+ +GQ  +DDG++DLDAFK+VYVAPMK LV+EV
Sbjct:   78 MATLNRVQSKMYKAAFEDQGNLLLCAPTGAGKTNVAMLCMLNLLGQHLKDDGSVDLDAFKIVYVAPMKALVQEV 151          
BLAST of mRNA_P-wetherbeei_contig8510.2.1 vs. uniprot
Match: A0A7J7Q1B8_9CHLO (RNA helicase, activating signal cointegrator 1 n=3 Tax=Scenedesmaceae TaxID=3086 RepID=A0A7J7Q1B8_9CHLO)

HSP 1 Score: 112 bits (279), Expect = 4.470e-27
Identity = 52/73 (71.23%), Postives = 63/73 (86.30%), Query Frame = 0
Query:    1 METLNRIQSKMCDAALLGSENLLLCAPTGAGKTNVAMLAMLHEIGQRRRDDGTIDLDAFKVVYVAPMKTLVEE 73
            M++LNR+QS++CD AL  SEN+L+CAPTGAGKTNVAML +LHE+G  RR DG+ID+ AFKVVYVAPMK LV E
Sbjct:  481 MQSLNRVQSRVCDTALYSSENMLVCAPTGAGKTNVAMLCILHELGLHRRTDGSIDMAAFKVVYVAPMKALVAE 553          
BLAST of mRNA_P-wetherbeei_contig8510.2.1 vs. uniprot
Match: A0A176VG96_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176VG96_MARPO)

HSP 1 Score: 111 bits (278), Expect = 6.110e-27
Identity = 54/73 (73.97%), Postives = 63/73 (86.30%), Query Frame = 0
Query:    1 METLNRIQSKMCDAALLGSENLLLCAPTGAGKTNVAMLAMLHEIGQRRRDDGTIDLDAFKVVYVAPMKTLVEE 73
            M TLNR+QSK+ + AL   ENLLLCAPTGAGKTNVAMLA+LHEIG +RR+DG+IDL+ FK+VYVAPMK LV E
Sbjct:  504 MTTLNRVQSKVYETALFTHENLLLCAPTGAGKTNVAMLAILHEIGLKRREDGSIDLNGFKIVYVAPMKALVAE 576          
BLAST of mRNA_P-wetherbeei_contig8510.2.1 vs. uniprot
Match: A0A2P6TQ19_CHLSO (U5 small nuclear ribonucleo 200 kDa helicase-like n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TQ19_CHLSO)

HSP 1 Score: 110 bits (276), Expect = 1.140e-26
Identity = 51/73 (69.86%), Postives = 62/73 (84.93%), Query Frame = 0
Query:    1 METLNRIQSKMCDAALLGSENLLLCAPTGAGKTNVAMLAMLHEIGQRRRDDGTIDLDAFKVVYVAPMKTLVEE 73
            M+ LNRIQS++C+ AL  SEN+L+CAPTGAGKTNVAML +LHEIG  RR+DG+ID  AFK++YVAPMK LV E
Sbjct:  488 MKALNRIQSRVCECALYSSENMLVCAPTGAGKTNVAMLTILHEIGLHRREDGSIDTSAFKIIYVAPMKALVAE 560          
BLAST of mRNA_P-wetherbeei_contig8510.2.1 vs. uniprot
Match: R1DUR0_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DUR0_EMIHU)

HSP 1 Score: 110 bits (274), Expect = 2.120e-26
Identity = 51/73 (69.86%), Postives = 62/73 (84.93%), Query Frame = 0
Query:    1 METLNRIQSKMCDAALLGSENLLLCAPTGAGKTNVAMLAMLHEIGQRRRDDGTIDLDAFKVVYVAPMKTLVEE 73
            M +LNR+QS++ D AL  +EN+LLCAPTGAGKTNVAML +LHEIG  R+ DG+ DLDAFK+VYVAPMK LV+E
Sbjct:  496 MSSLNRVQSRVYDCALFSAENMLLCAPTGAGKTNVAMLTLLHEIGLHRQPDGSFDLDAFKIVYVAPMKALVQE 568          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8510.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHW4_ECTSI3.500e-3078.38Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
K8YVZ6_NANGC1.460e-2875.34Pre-mRNA-splicing helicase BRR2 n=1 Tax=Nannochlor... [more]
W7TFU8_9STRA1.460e-2875.34U5 small nuclear ribonucleoprotein helicase n=3 Ta... [more]
A0A2P6V4J1_9CHLO5.070e-2873.97U5 small nuclear ribonucleo 200 kDa helicase-like ... [more]
E1Z6L6_CHLVA9.410e-2872.60Uncharacterized protein n=1 Tax=Chlorella variabil... [more]
A0A7S3Y2E0_HETAK4.440e-2771.62Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7J7Q1B8_9CHLO4.470e-2771.23RNA helicase, activating signal cointegrator 1 n=3... [more]
A0A176VG96_MARPO6.110e-2773.97Uncharacterized protein n=2 Tax=Marchantia polymor... [more]
A0A2P6TQ19_CHLSO1.140e-2669.86U5 small nuclear ribonucleo 200 kDa helicase-like ... [more]
R1DUR0_EMIHU2.120e-2669.86Uncharacterized protein n=2 Tax=Emiliania huxleyi ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 2..73
e-value: 7.0E-26
score: 92.8
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..73
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 6..73
e-value: 4.7E-11
score: 42.8
NoneNo IPR availablePANTHERPTHR24075SEC63 DOMAIN-CONTAININGcoord: 1..74
NoneNo IPR availablePANTHERPTHR24075:SF5U5 SMALL NUCLEAR RIBONUCLEOPROTEIN 200 KDA HELICASEcoord: 1..74
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 13..74
score: 9.540823

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8510contigP-wetherbeei_contig8510:2553..2774 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8510.2.1mRNA_P-wetherbeei_contig8510.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig8510 2553..2774 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig8510.2.1 ID=prot_P-wetherbeei_contig8510.2.1|Name=mRNA_P-wetherbeei_contig8510.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=74bp
METLNRIQSKMCDAALLGSENLLLCAPTGAGKTNVAMLAMLHEIGQRRRD
DGTIDLDAFKVVYVAPMKTLVEEV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR011545DEAD/DEAH_box_helicase_dom
IPR014001Helicase_ATP-bd