prot_P-wetherbeei_contig837.3.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig837.3.1
Unique Nameprot_P-wetherbeei_contig837.3.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length545
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig837.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 141..161
NoneNo IPR availableGENE3D4.10.1000.10coord: 486..535
e-value: 1.3E-5
score: 27.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..38
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 238..260
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 238..258
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 409..430
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 364..384
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 332..492
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 385..400
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 431..491
NoneNo IPR availablePANTHERPTHR46557:SF1SERINE/THREONINE-PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 10coord: 318..522
NoneNo IPR availablePANTHERPTHR46557SERINE/THREONINE-PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 10-RELATEDcoord: 60..310
NoneNo IPR availablePANTHERPTHR46557:SF1SERINE/THREONINE-PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 10coord: 60..310
NoneNo IPR availablePANTHERPTHR46557SERINE/THREONINE-PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 10-RELATEDcoord: 318..522
IPR000571Zinc finger, CCCH-typeSMARTSM00356c3hfinal6coord: 496..523
e-value: 3.8E-5
score: 33.1
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 496..524
score: 15.506663
IPR036855Zinc finger, CCCH-type superfamilySUPERFAMILY90229CCCH zinc fingercoord: 495..526

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig837contigP-wetherbeei_contig837:5879..7513 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig837.3.1mRNA_P-wetherbeei_contig837.3.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig837 5811..7859 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig837.3.1 ID=prot_P-wetherbeei_contig837.3.1|Name=mRNA_P-wetherbeei_contig837.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=545bp
MKGRTHGAPHGAAGAAAAAASAATAAGHKTAAGKPTAPSAGGGAASAAAA
AAAAEAEKRRRLLRWRVPAALDLRFLPADQRVVEVASEEVGLQQSRLRGR
MEEVYLDARHIPPTPAEPPLAVIGAASGGDDDAGILIPFVNEEEEEREAA
ARAEAEAAAVAAAAAAAVERRLEEALGRLKPAHAVAFRQRLGREGGLVPA
VTMPGGFIDEGLLAAYAQQALMMPAHLPLPIPLPPHLRHVAPPPQQVQQP
PPGQQQMQPPPQQMMQQMAPQQMQQMPLPQMVYTNGQMVYATSQGMMTTT
GMAPPPHQQQVAVVPGTASVYMPPLQQQLPQMAPAPPGYMAAPPQQQQQV
PGGYVMQMPGAPPMQMQPGQPGQPGQPYQMPPAPYYYTTPQQQQPLQMAP
SPGQYVMAPPHQQQPPPQQPPQPPRRPPERSPSPPGHRRYDDRYGDSDRG
GGGGRYGDGRDRDEGRDQDRAGGGGRSDRDRGEHQERPMTAALAARRKTI
PCEFFGKPGGCRRGDSCMFLHDAERCKALPQRPGRGFAGRGPSR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000571Znf_CCCH
IPR036855Znf_CCCH_sf