prot_P-wetherbeei_contig8274.1.3 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig8274.1.3
Unique Nameprot_P-wetherbeei_contig8274.1.3
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length512
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8274.1.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 94..149
e-value: 2.2E-6
score: 37.2
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 55..153
e-value: 3.4E-10
score: 41.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 454..511
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 496..511
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 155..239
IPR019786Zinc finger, PHD-type, conserved sitePROSITEPS01359ZF_PHD_1coord: 95..148
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 92..151
score: 9.0361
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 87..149

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8274contigP-wetherbeei_contig8274:90..2633 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8274.1.3mRNA_P-wetherbeei_contig8274.1.3Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig8274 2..2854 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig8274.1.3 ID=prot_P-wetherbeei_contig8274.1.3|Name=mRNA_P-wetherbeei_contig8274.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=512bp
MESPPDSESLAVLHSRLLSEASVLKKNRAGDGGNPFSWWTSTLRRRVAIW
YAKLAVVNAVLEERAAKMSGSTTDNSNSESDFDDDNNGGGSGGACPVCEV
DAGGDQDGEGGLLACSGERCLANYHTGCLPRLPGLPAISEGDWLCPKCTA
AGDAGPPSEAEGSTAASFSAGAGEGDDGIGGGGGGGGDSGGGGTSDSGTS
GGTIGGGDAGGSGVAENDGGLPYDLTPAGQTRQRRRCLSQSTEELSVTAG
RLQLLLRNLGDDCPLRYGGGADGDNGSDGGSGGCTGGGGCEGGDDGDAAA
AYLALPVRHRVALLLALCEAAVDENHALKGGMDDMDSEDLRVRPLGVDSN
KAAYFWFEPLATDLRVYRQPTNGGGAHSGGGGEALGWDGEPSWEVVVDSL
EGLEALSKALEASGYAADKRLHAAMRPIVTNAREEHERRQRALLREEKKT
ALASVLRRKSSRRSKRTAKGGPDDSSGAEADGADDGREERARAVLQPPTQ
PPPPSPPSQAD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001965Znf_PHD
IPR013083Znf_RING/FYVE/PHD
IPR019786Zinc_finger_PHD-type_CS
IPR019787Znf_PHD-finger
IPR011011Znf_FYVE_PHD